Basic Information

Insect: Tuta absoluta
Gene Symbol: stc
Assembly: GCA_029230345.1
Location: CM055289.1:11414109-11426454[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 3.9e+04 -4.3 1.6 15 19 505 509 504 509 0.81

2 13 0.34 6.6e+03 -1.7 2.3 2 10 537 545 537 545 0.85

3 13 0.00019 3.7 8.7 19.8 4 19 553 568 551 568 0.93

4 13 6.9e-07 0.013 16.5 11.4 1 19 604 622 604 622 0.97

5 13 9.6e-06 0.19 12.9 10.9 1 18 663 680 663 681 0.98

6 13 2.7e-06 0.052 14.7 12.7 1 19 722 744 722 744 0.88

7 13 2 3.9e+04 -5.3 2.2 6 10 774 778 774 778 0.94

8 13 0.00059 11 7.2 6.4 1 11 784 794 784 795 0.95

9 13 0.087 1.7e+03 0.2 0.5 3 10 798 805 798 805 0.93

10 13 2.3e-08 0.00044 21.3 14.3 1 19 811 829 811 829 0.99

11 13 0.038 7.4e+02 1.4 17.2 1 18 868 884 868 885 0.81

12 13 3.6e-08 0.00069 20.6 13.8 1 17 921 939 921 945 0.83

13 13 0.0043 83 4.4 11.8 1 18 951 973 951 974 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	3.9e+04	-4.3	1.6	15	19	505	509	504	509	0.81
2	13	0.34	6.6e+03	-1.7	2.3	2	10	537	545	537	545	0.85
3	13	0.00019	3.7	8.7	19.8	4	19	553	568	551	568	0.93
4	13	6.9e-07	0.013	16.5	11.4	1	19	604	622	604	622	0.97
5	13	9.6e-06	0.19	12.9	10.9	1	18	663	680	663	681	0.98
6	13	2.7e-06	0.052	14.7	12.7	1	19	722	744	722	744	0.88
7	13	2	3.9e+04	-5.3	2.2	6	10	774	778	774	778	0.94
8	13	0.00059	11	7.2	6.4	1	11	784	794	784	795	0.95
9	13	0.087	1.7e+03	0.2	0.5	3	10	798	805	798	805	0.93
10	13	2.3e-08	0.00044	21.3	14.3	1	19	811	829	811	829	0.99
11	13	0.038	7.4e+02	1.4	17.2	1	18	868	884	868	885	0.81
12	13	3.6e-08	0.00069	20.6	13.8	1	17	921	939	921	945	0.83
13	13	0.0043	83	4.4	11.8	1	18	951	973	951	974	0.87

Sequence Information

Coding Sequence: ATGTCCCAGTGGAACAATTCATACCAATATCAAGGCGGTTATCAGAGTGGCAACACCTGGAATGGCGATGCTAACAGTCAATTTGTGAACCAGCCATACTATCCGGGAGGTCAGTATGATCAACCAAGCAACCAGTATGTCAGCTTCAATGAGTTTTTGTCCCAGATGCAGGGTAACAACGCGGGTGCACCTGCCACAGCCAGCTTCAATAATACTCAATATCCAACTTACGAAGGAAACCAATACACCTATCAAAACCTACCCTCATCATCACAAAATACCCCTGAAATGGCCTCCTACAATTCTCCTTCCAATAATGCTACTGTTAACAAAACAGAAACATATCAAGCACAGGCACTTAATCAGTACAACCCACCACCACAAGATTTAGCAATGAATGATGTAGCTATTAAATCAAATCTTACTGCAACAGCAACTGAATTTGTCCCTAAAAGTTCAACAGTAAAACCTTCCTCTAGTGCACCTTATATCAAGTCAGAACCATCCAAACCAAGAAACTCAAGGGAGCCTAAAAGCACTAGTTCATCAGATACTAATTGGAGGGAAAGACCCCAAACATCTGGCCAAAGTAGTGGTTCCCGTAATGACTATGGGCAGAATGGTGGTACTAGAAAGGACTATGGGCAGAATGGAGGGACCCGAAATGACTATGCGCAGGATGATAGCTCCCAAAATGACTATGTCCAAAGTAGTACTTCCCGAAATGACTACAGACATAACAGTGGCTCCCGTAATGACTATAGACAAAATGAtagatatgattccaataacAGCTACAGACAAGACTCAAACAATCACAAACAGTCCAATAGTCGTTATAATGAATCTACCAGTAGAAATACTGATTCCAACTACCGTAGTTCAAATAACCGTAGCTATGATAGAAACTATGAATCTAAAAACAATGAGCTTAGTAATCATAATGACCGTTATGAGTCCCAGAACAATGACTCAAATAATCGTTATCATGAAAGAAATCAAAAGGGTAATTCTAAATCAAACAAATACAGTAAAGAAGAACGAACCTACTACAATAgctcaataaataaacaagagAAGAATGGTCGGGAGGACTCTAGAAGAGGGAGGAATTATACTGGGAGTTCCCGAGTCAGGGCTGCAGTAGATAGGAACATGGCAGAAGAAGAGCAGTTTGCTAGCAGCTATCTTCAGTTTAAGGAAGAGAAAAGGGAGAGGGACAGGGAAGAGGGAGGGAGGGGCAGGGAGACTGAAAGAATCACTAAGGAAAACATGCCAAGTCCCAGAAACAGAAAAAAGCCTACAAATGATCATGGAGCCAACAACAAAGAAATGACTCAACGGGAGCGTCTATCTGAACAGCTTGACAAAGGCACACTGGAGTGCTTGGTGTGCTGTGACCGTGTGAAACAGACGGACCCTGTGTGGTCTTGTGCCAACTGCTACCATGTGCTGCATCTACGCTGCATCAGAAAATGGGCCACTAGTAGTTCTGTTGAGGGTAAATGGCGTTGCCCAGCGTGCCAAAACACGAGCGAGGAAGTGCCAAACGAGTACTGGTGCATGTGTGGTGCGAAGCGCAATCCGGAGTGGCAGCGAGGCGCGATGGGCGCACACACTTGCGGACGCGGCTGCCGGCGGCCGCGCCCCTGCCCGCACCCGTGCCCGCTGACGTGCCACCCCGGCCCCTGCCCACCCTGCACCACCACTGTCACCAAACACTGCGGCTGCGgcgcggacactcgcacagtgcTGTGCAGCGACAAAGCTCCGTTGGTGTGTGGCCGCGTCTGCAACCGCTTGTTGGCTTGCGGCGTGCACGCGTGTGCCAAAGAGTGCCACGAGGGCGCCTGCGGGGATTGCACTCAACTCATCATTCAAGTATGCTACTGCGAAAAGAAAGAGAAGCGTTCGGTCCCTTGCACGGCGTCCCACAGCGGCGTCGTCAGCTGGTCGTGCGGCGCGCCGTGCTCGCTCGTGCTGGCGTGCGGCGCGCACCTGTGCGACGCGGTGTGCCACCCGCCGCCCTGCCCCGCCTGCGCGCGCAGCCCCGACACCGTGCGCGCCTGCCCCTGCGGACACACCAAACTGAGTCCGGAGTCCCGCAGGAAGTGCACCGACCCGATACCGACGTGCGACAACATCTGCCTCAAGCCGCTCACTTGCGGACCGCCTGACGACAAACACTTCTGCAAACAAACTTGTCACAATGGTGAATGTCCCGTGTGCCCCGATAAGACGCTTATTGTGTGTCGCTGCAAGAACGCCACGCGCGAGGTGCCGTGCGCTGAGCTTCCAGATATGGACGACTTTTTCCTGTGCCAGAAGAAATGTAACAAGAAACTGTCCTGTGGGCGTCACCGCTGCCGTGCCGTGTGCTGCGCCGACAAGCAGCACCGCTGCGGCGTGGTGTGCGGGCGGTTCCTCGCGTGCGGGCTGCATCGCTGCGAGCAGTTCTGCCACACCGGCCACTGCGCGCCCTGCCCTAGAttagAGTTCCAAGAGCTATCCTGCGAGTGCGGCGCGGAGGTGATCCTGCCGCCGATCGCGTGCGGCACGAAACCGCCGGCTTGCACGgcgccgtgccggcggcggcgtgtGTGCGGTCACCCCCCGCACCACTCGTGCCACTCCGGCGACTGCCCGCCCTGCGTCGTGCTGACCACCAAGATGTGTTACGGACAGCATGAGGAGCGTAAAACCATCCCGTGTTCGCAAGATGAGTTCTCGTGCGGGCTGCCGTGCGGCAAGCCGCTGCCCTGCGGCAAACACACGTGCATCAAGACCTGCCACAAGGGGCCTTGCGATACTGGCAAATGCATGCAACCGTGCACAGTGGTGCGGCCATCGTGCGGTCACCCGTGCGCGGCGCCCTGCCACGCGGACAACGGGGGCGCTTGCCCCTCCAATGCGCCCTGCAAGCGCACCGTGCGCGCCACCTGCCCGTGCACGCGCAAGCACGCCGACCGCACCTGCGCAGACAACAGCCGCGACAGAGCCAAAATCCTAAGCGCACTCGCCGCTTCCAAAGTTCAAGAGGGAGGAACTGTAGATATAACTGAAATGCGTCCTAGTGCAATGCTCAAAACgcTGGAATGCGATGACGAATGCCGTGTGGAGGCGCGCACGCGTCAGCTCGCTCTGGCGCTACAGATCCGCAATCCCGACGTATCCTCGAAACTAGCTCCAAGATACAGCGACCACGTGCGGAACACCGCAGTCAAAGAGCCCGCCTTCGCGCAGCAGATACACGACAAGCTCACGGAACTCGTGCAGCTCGCTAAGAAGTCGAAACAGAAGACGCGTTCACACTCGTTCCCATCGATGAACTGGGCGCGGCGTCAGTTCGTCCACGAGTTGTGCGAGCAGTTCGGTTGTGAGTCCGTCGCGTACGACGCCGAGCCCAACCGGAACGTGGTCGCCACCGCCGACAGGGAGAAGtCGTGGCTGCCAGCAATGAGCATCCTGGAAGTGCTGGCACGCGAAGCCGGCAAACGGAGAATCCCTGGTCCCGTGCTGCGAGCGCCCGCGCAAGCTTCCAGCGCTGGCAACTCCTCTGCGCAGTCCAGCTCCAACACTGCCAAATCGTCTGGCTGGGCGACCCTCACGTCGACAAACGCATGGGCGTCACGCAGCGCAGCCCGGCCTTCCGCCACCGCCTCCAACACCTCCACGGCCTCCGCCCCCGCACCTCCCGCCACCCCCGCGCCCCCCAAGATAGACTACTTCGACAATCCGCCCGATAACTAG
Protein Sequence: MSQWNNSYQYQGGYQSGNTWNGDANSQFVNQPYYPGGQYDQPSNQYVSFNEFLSQMQGNNAGAPATASFNNTQYPTYEGNQYTYQNLPSSSQNTPEMASYNSPSNNATVNKTETYQAQALNQYNPPPQDLAMNDVAIKSNLTATATEFVPKSSTVKPSSSAPYIKSEPSKPRNSREPKSTSSSDTNWRERPQTSGQSSGSRNDYGQNGGTRKDYGQNGGTRNDYAQDDSSQNDYVQSSTSRNDYRHNSGSRNDYRQNDRYDSNNSYRQDSNNHKQSNSRYNESTSRNTDSNYRSSNNRSYDRNYESKNNELSNHNDRYESQNNDSNNRYHERNQKGNSKSNKYSKEERTYYNSSINKQEKNGREDSRRGRNYTGSSRVRAAVDRNMAEEEQFASSYLQFKEEKRERDREEGGRGRETERITKENMPSPRNRKKPTNDHGANNKEMTQRERLSEQLDKGTLECLVCCDRVKQTDPVWSCANCYHVLHLRCIRKWATSSSVEGKWRCPACQNTSEEVPNEYWCMCGAKRNPEWQRGAMGAHTCGRGCRRPRPCPHPCPLTCHPGPCPPCTTTVTKHCGCGADTRTVLCSDKAPLVCGRVCNRLLACGVHACAKECHEGACGDCTQLIIQVCYCEKKEKRSVPCTASHSGVVSWSCGAPCSLVLACGAHLCDAVCHPPPCPACARSPDTVRACPCGHTKLSPESRRKCTDPIPTCDNICLKPLTCGPPDDKHFCKQTCHNGECPVCPDKTLIVCRCKNATREVPCAELPDMDDFFLCQKKCNKKLSCGRHRCRAVCCADKQHRCGVVCGRFLACGLHRCEQFCHTGHCAPCPRLEFQELSCECGAEVILPPIACGTKPPACTAPCRRRRVCGHPPHHSCHSGDCPPCVVLTTKMCYGQHEERKTIPCSQDEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCMQPCTVVRPSCGHPCAAPCHADNGGACPSNAPCKRTVRATCPCTRKHADRTCADNSRDRAKILSALAASKVQEGGTVDITEMRPSAMLKTLECDDECRVEARTRQLALALQIRNPDVSSKLAPRYSDHVRNTAVKEPAFAQQIHDKLTELVQLAKKSKQKTRSHSFPSMNWARRQFVHELCEQFGCESVAYDAEPNRNVVATADREKSWLPAMSILEVLAREAGKRRIPGPVLRAPAQASSAGNSSAQSSSNTAKSSGWATLTSTNAWASRSAARPSATASNTSTASAPAPPATPAPPKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -