Tabs029274.1
Basic Information
- Insect
- Tuta absoluta
- Gene Symbol
- gatad1
- Assembly
- GCA_029230345.1
- Location
- CM055304.1:11747484-11750504[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.8e-09 1.7e-05 25.4 2.6 1 29 6 32 6 37 0.94
Sequence Information
- Coding Sequence
- ATGCCAAAACCAACGTGTGTTCAATGCAGTACCAACGACTCCTTGCTTTGGAGGAGCGCCGAGAACGGTCAAATCTGTAACGAATGCCACATATCGAATAGCGTTACCAAGGAGGTAAAAGTGGAGCTTACGGCTATAAAACTCGAGAGAGACGAAGATAGCCAGGATGAGAAGAATGGCAAGGAGGTGGAATCCACGCCCGCTAAAGTGGGAAAAGGTACCAGGAAGAGTACTAGGGCGACACGATACAAGCCCAAAACTCCTGTCGCTCCGACGCCAGTTAAACCGAACGCCCCGCGCGGGAGAGGCCGCAGAAGCATATTTAAGAGACCGCCGTTGAAAGCGCCAACGGCTACTGCCACTGTGGTTACCAGTGATACTATATTTTATAAgGGTAACTACATGCAAAAAGGTGACATAGTATCAATGGTGGATGTTGACGGAGGAATCTACTACGCTCAGATCCGGGGATTCTTGACGGACCAGTATTGTGAGAAGAGTGCCGTTGTCACATGGTTGTTGCCAACTAAAGCCAGTCCACCACCGGAGAACGGATTTGATCCAGCTACTTATATCATTGgTCCTGAAGAGGAACTCGCAAGGAAACTAGATGTAATGGAATTCGTGATGCATGCCCCATCAGACTATTACAAGGCCAGCAACAGTCCGTACCCGTTGGTTGAAACCGAGTTGAATAACTACAACGGGTTCATTTGGACATCGTTAGAGGCGAAGGAGAGGGCGTAG
- Protein Sequence
- MPKPTCVQCSTNDSLLWRSAENGQICNECHISNSVTKEVKVELTAIKLERDEDSQDEKNGKEVESTPAKVGKGTRKSTRATRYKPKTPVAPTPVKPNAPRGRGRRSIFKRPPLKAPTATATVVTSDTIFYKGNYMQKGDIVSMVDVDGGIYYAQIRGFLTDQYCEKSAVVTWLLPTKASPPPENGFDPATYIIGPEEELARKLDVMEFVMHAPSDYYKASNSPYPLVETELNNYNGFIWTSLEAKERA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00355793; iTF_00844986; iTF_00674817; iTF_00151204; iTF_00187716; iTF_00209476; iTF_00078049; iTF_00027431; iTF_01401864; iTF_01404012; iTF_00807312; iTF_00028375; iTF_00208478; iTF_00994886; iTF_01337448; iTF_00178840;
- 90% Identity
- iTF_00844986;
- 80% Identity
- -