Tabs000030.1
Basic Information
- Insect
- Tuta absoluta
- Gene Symbol
- -
- Assembly
- GCA_029230345.1
- Location
- CM055282.1:237763-241335[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.0069 24 5.7 0.4 3 15 25 37 24 41 0.88 2 16 0.0069 24 5.7 0.4 3 15 90 102 89 106 0.88 3 16 0.0042 15 6.4 0.3 3 15 155 167 154 172 0.88 4 16 0.0014 4.9 7.9 1.1 3 15 220 232 219 237 0.88 5 16 0.0069 24 5.7 0.4 3 15 239 251 238 256 0.87 6 16 0.0069 24 5.7 0.4 3 15 304 316 303 321 0.87 7 16 0.0069 24 5.7 0.4 3 15 369 381 368 386 0.87 8 16 0.0062 22 5.8 0.3 3 15 586 598 585 603 0.88 9 16 0.0042 15 6.4 0.3 3 15 708 720 707 725 0.88 10 16 0.0014 4.9 7.9 1.1 3 15 811 823 810 828 0.88 11 16 0.0014 4.9 7.9 1.1 3 15 830 842 829 847 0.88 12 16 0.0062 22 5.8 0.3 3 15 849 861 848 866 0.88 13 16 0.05 1.7e+02 2.9 1.8 3 15 971 983 970 988 0.86 14 16 0.0042 15 6.4 0.3 3 15 990 1002 989 1007 0.88 15 16 0.0014 4.9 7.9 1.1 3 15 1074 1086 1073 1091 0.88 16 16 0.0042 15 6.4 0.3 3 15 1093 1105 1092 1110 0.88
Sequence Information
- Coding Sequence
- ATGCCAACTCCGGCATCAGTGAACCGTGCCCGAGCTGCCACAAGCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCAAGCAGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAAACAACGGCAACATGCCAGCTCCGGCATGCCGGCGGGGCTCCGGGCGCGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCATGCCGGCGGGGCTCCGGGCGCGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCAAGCAGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAAACAACGGCAACATGCCAGCTCCGGCATGCCGGCGGGGCTCCGGGCGCGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCATGCCGGCGGGGCTCCGGGCGCGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCATGCCGGCGGGGCTCCGGGCGCGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCAAGCAGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCAAGCAGGCGGGGCTCCGGGCGCGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCAAGCCAGCGGGGCTCCGGGCGCGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCAAGCCAGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCAAGCCAGCGGGGCTCCGGGCGCGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCAAGCCAGCGGGGCTCCGGGCGCGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCAAGCAGGCGGGGCTCCGGGCGCGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCAAGCCAGCGGGGCTCCGGGCGCGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCAAGCCAGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCAAGCCAGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCAGCGGGGCTCCGGGCGCGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCAAGCAGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCAAGCAGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCAAGCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCGGGGCTCCGGGCGCGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCATGCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCATGCTGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAAACAACGGCAACATGCCAGCTCCGGCAAGCCGGCGGGGCTCCGGGCGCGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCAAGCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCAAGCCGGCGGGGCTCCGGGCGCGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCATGCTGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAAACAACGGCAACATGCCAGCTCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCAAGCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGTGGGGCTCCGGGCGCGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCATGCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCATGCTGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAAACAACGGCAACATGCCAGCTCCGGCAAGCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCATGCCGGCGGGGCTCCGGGCGCGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCGGGGCTCCGGGCGTGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCATGCCGGCGGGGCTCCGGGCGCGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCGGGGCTCCGGGCGCGCACAGACAGACTGCAAGACAACGGCAACATGCCAGCTCCGGCATCAGTATACCGTGCCTGA
- Protein Sequence
- MPTPASVNRARAATSRRGSGRAQTDCKTTATCQLRQAGGAPGVHRQTAKQRQHASSGMPAGLRARTDRLQDNGNMPAPACRRGSGRAQTDCKTTATCQLRQAGGAPGVHRQTAKQRQHASSGMPAGLRARTDRLQDNGNMPAPACRRGSGRAQTDCKTTATCQLRHAGGAPGAHRQTARQRQHASSGKQAGLRACTDRLQDNGNMPAPASRRGSGRAQTDCKTTATCQLRRGSGRAQTDCKTTATCQLRQASGAPGAHRQTARQRQHASSGKPAGLRACTDRLQDNGNMPAPASQRGSGRAQTDCKTTATCQLRQASGAPGAHRQTARQRQHASSGKQAGLRARTDRLQDNGNMPAPASQRGSGRAQTDCKTTATCQLRQASGAPGVHRQTARQRQHASSGKPAGLRACTDRLQDNGNMPAPAGLRACTDRLQDNGNMPAPAGLRACTDRLQDNGNMPAPAGLRACTDRLQDNGNMPAPAGLRARTDRLQDNGNMPAPAGLRACTDRLQDNGNMPAPAGLRACTDRLQDNGNMPAPAGLRACTDRLQDNGNMPAPAGLRACTDRLQDNGNMPAPASRRGSGRAQTDCKTTATCQLRQAGGAPGVHRQTARQRQHASSGGAPGVHRQTARQRQHASSGGAPGVHRQTARQRQHASSGKPAGLRACTDRLQDNGNMPAPAGLRARTDRLQDNGNMPAPACRRGSGRAQTDCKTTATCQLRHAGGAPGVHRQTAKQRQHASSGKPAGLRARTDRLQDNGNMPAPAGLRACTDRLQDNGNMPAPAGLRACTDRLQDNGNMPAPASRRGSGRAQTDCKTTATCQLRRGSGRAQTDCKTTATCQLRRGSGRAQTDCKTTATCQLRQAGGAPGAHRQTARQRQHASSGGAPGVHRQTARQRQHASSGGAPGVHRQTARQRQHASSGMLAGLRACTDRLQNNGNMPAPAGLRACTDRLQDNGNMPAPASRRGSGRAQTDCKTTATCQLRWGSGRAQTDCKTTATCQLRHAGGAPGVHRQTARQRQHASSGGAPGVHRQTARQRQHASSGMLAGLRACTDRLQNNGNMPAPASRRGSGRAQTDCKTTATCQLRRGSGRAQTDCKTTATCQLRHAGGAPGAHRQTARQRQHASSGGAPGVHRQTARQRQHASSGMPAGLRARTDRLQDNGNMPAPAGLRARTDRLQDNGNMPAPASVYRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -