Tabs002428.1
Basic Information
- Insect
- Tuta absoluta
- Gene Symbol
- pnr
- Assembly
- GCA_029230345.1
- Location
- CM055283.1:94536-97401[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-16 4.7e-13 49.5 3.3 1 35 450 483 450 484 0.97 2 2 9.7e-18 3.4e-14 53.2 7.5 1 35 511 544 511 545 0.97
Sequence Information
- Coding Sequence
- ATGGAGACCGTCCCATCGAACATGTCGACGAGCGCGTCGCAGGAAGAGGTGAGCGACGCGACTGGCGCGCTGCAGCTCGTCAAGAACGAGAACCGCAACGAGCAGCCGGGCGAGCAGCAAGGCGAGCCACACGAGCAGGCAACAAGCGAGCAGCCGGCGGGCGAGCACGCGGGCGAGCAGGCTGCCGAGCCGCCACCGCAGTCCGTGATCCAGCGTCGCGGGCTGCGCACCATCACCGCCGCCGGACACATCACGGAGGGCGAGGAGCTGCCCGACGACAGCGTGAAGGACGAGCCGCCCGAGCCGCCGCTGGACGAGCACTACCAGCCCAAGCAGGAGCAGGACGCGCGCGCGCACCTGCACTACGAGGAGGAGCGCCTGCGGCTCGCCGACGCGGACGCGGCGCGCTACCTCGCCTTCAACCGCGCCGCCATGCCGCCCGGCGCCCCCGGCCCACCGCGCCCGCAGTTCGCGCGGCCCACGCGCGCGCCCTACCCGCGCGGACTCGCGTTCCGCTACGGGGCGCCACACCACGTGATCGTGGCGCCAGAGGGTGAGCCGGAGGATGCGCATGCGCACGACGCAGCCGCGTTCCTGGCGCGCGAGAAGCAGGAGCTCCAGTACGTGGCCACCAGCATCGCCAGCGACGAGGCGCGCTACTCCGCCGCGCTCGGCGAACAGGCCGCCACCGCGCTCGAGATGATCCAGTCCACCGCTCTCAGCAACCAGCAATCGGTTGGCATTGCTTACCAGCAGGTGAAATACGAGACGAGAGGTGAAGGCGAGGCGCGACCGGGAACGTACGCGAGCCTGCAGCCGGTGACGTCGGTGCACGGCGGCTACACGTACTCGAGCGCGTCGCCGCAGTACGGCGCGGGAGGCGCCGCATCCGGCTACGGCGCGTACGCCACCAACGGCAAGGAGTTGCTGACGCTGTACGGCGCGGGGGGGAGCGCGGGGGGCGGCGGGCGCGAGGGGGAGTCGCCCCCCGGGCAGCTGCTGTACCGCTCCGACCCCACGCTGTCGTCCTCCTCCCTCCCCACGAGGGGTCACGTCGTCTACAGCTCGGTGGTTCCTCAATCACAGACAGTTTATGAAGCTCCGCCTAGCCCCAATTCACAGCAAGTGACACTTTATACCCATGGCAACACAGTTCAGTACAAAGTAGGCGGCGATCACTACCTCGGCGCCGGCGGGGGAGTAGACTATGTCCCAGTATCAGGTTACGAAGGAGGACTATTGGTGGAGGGATATGCGGCTCCAACACAATCCTGGCCAGGACACAACTTGCTACCAATCGACGATGGGTTCGATCCCAGTATGGCAGGCATGGGTGAGGTGAAGGAATGCGTGAACTGTGCTGCGGCGACGACGCCGCTGTGGCGACGAGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACACGCGCATCAATGGCGTCAACCGGCCACCGCTCAAGGGACAGAAGGCGAAACCTCAACAAGCACTGCCGACGAACGGCAACCGTCGCGTGGGCGTGACGTGCGCCAACTGCCGCACCTCCAACACGACGCTGTGGCGGCGCAACAACAACGGCGAGCCAGTCTGCAACGCCTGCGGACTCTACTACAAGCTGCACAATGTGAACCGGCCCTTGAGTATGAAGAAGGACGGTATCCAGACGCGGAAACGCAAGCCGAAGAGCATGGGCGGAGGTCACGCGGCGGGCTCCGCGCGGCCGCCAGCGCCTCTTACAGTGGAGGCGGGGAGGGGGCTGCCACCGCTGTACGCCTCGCTGGAGCCCGCGCCCCTCGCATCCCCCGCGCCCGCGACGCTGCTGCTGCCGCGCCACGAGGACGCGCGCCTCCCGCCTCACGCCTGA
- Protein Sequence
- METVPSNMSTSASQEEVSDATGALQLVKNENRNEQPGEQQGEPHEQATSEQPAGEHAGEQAAEPPPQSVIQRRGLRTITAAGHITEGEELPDDSVKDEPPEPPLDEHYQPKQEQDARAHLHYEEERLRLADADAARYLAFNRAAMPPGAPGPPRPQFARPTRAPYPRGLAFRYGAPHHVIVAPEGEPEDAHAHDAAAFLAREKQELQYVATSIASDEARYSAALGEQAATALEMIQSTALSNQQSVGIAYQQVKYETRGEGEARPGTYASLQPVTSVHGGYTYSSASPQYGAGGAASGYGAYATNGKELLTLYGAGGSAGGGGREGESPPGQLLYRSDPTLSSSSLPTRGHVVYSSVVPQSQTVYEAPPSPNSQQVTLYTHGNTVQYKVGGDHYLGAGGGVDYVPVSGYEGGLLVEGYAAPTQSWPGHNLLPIDDGFDPSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHAAGSARPPAPLTVEAGRGLPPLYASLEPAPLASPAPATLLLPRHEDARLPPHA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00844982;
- 90% Identity
- iTF_00844982;
- 80% Identity
- -