Tabs032591.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tuta absoluta
Gene Symbol
THAP3
Assembly
GCA_029230345.1
Location
CM055309.1:7242589-7275941[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 31 2.1 2.1e+02 3.7 0.8 1 23 393 415 393 415 0.92
2 31 0.11 10 7.9 0.8 1 23 422 445 422 445 0.93
3 31 1.6 1.5e+02 4.2 0.2 1 23 449 471 449 471 0.92
4 31 0.017 1.7 10.3 1.0 1 23 476 499 476 499 0.98
5 31 0.011 1.1 10.9 0.7 1 23 503 526 503 526 0.95
6 31 1.2 1.2e+02 4.5 0.3 2 23 615 637 614 637 0.96
7 31 0.038 3.7 9.2 0.5 2 20 653 671 652 674 0.92
8 31 2.3e-05 0.0022 19.4 2.5 1 23 680 702 680 702 0.99
9 31 0.0024 0.23 13.0 1.2 1 20 709 728 709 730 0.95
10 31 0.0024 0.23 13.0 1.2 1 20 781 800 781 802 0.95
11 31 0.0024 0.23 13.0 1.2 1 20 853 872 853 874 0.95
12 31 0.046 4.5 9.0 0.4 1 13 925 937 925 941 0.90
13 31 0.046 4.5 9.0 0.4 1 13 994 1006 994 1010 0.90
14 31 0.13 12 7.6 0.4 1 13 1060 1072 1060 1076 0.89
15 31 0.0024 0.23 13.0 1.2 1 20 1129 1148 1129 1150 0.95
16 31 0.0092 0.9 11.2 2.0 1 20 1201 1220 1201 1222 0.94
17 31 0.5 49 5.7 0.5 1 13 1273 1285 1273 1289 0.90
18 31 0.0024 0.23 13.0 1.2 1 20 1339 1358 1339 1360 0.95
19 31 0.046 4.5 9.0 0.4 1 13 1408 1420 1408 1424 0.90
20 31 0.0024 0.23 13.0 1.2 1 20 1477 1496 1477 1498 0.95
21 31 0.0024 0.23 13.0 1.2 1 20 1549 1568 1549 1570 0.95
22 31 0.5 49 5.7 0.5 1 13 1618 1630 1618 1634 0.90
23 31 0.0016 0.16 13.6 1.3 1 20 1684 1703 1684 1705 0.95
24 31 0.0024 0.23 13.0 1.2 1 20 1753 1772 1753 1774 0.95
25 31 0.046 4.5 9.0 0.4 1 13 1825 1837 1825 1841 0.90
26 31 0.046 4.5 9.0 0.4 1 13 1891 1903 1891 1907 0.90
27 31 0.046 4.5 9.0 0.4 1 13 1957 1969 1957 1973 0.90
28 31 0.046 4.5 9.0 0.4 1 13 2023 2035 2023 2039 0.90
29 31 0.0024 0.23 13.0 1.2 1 20 2094 2113 2094 2115 0.95
30 31 0.0024 0.23 13.0 1.2 1 20 2164 2183 2164 2185 0.95
31 31 0.0024 0.23 13.0 1.2 1 20 2197 2216 2197 2218 0.95

Sequence Information

Coding Sequence
ATGCGGTGCAGTGTGCCCAATTGCACTAACGATACGAAGAGGACTCCTATAGGCCAAGGAATATCGTTTCACCAGTTTCCAAAAGAGCCGAACCTTCGTTCATCATGGGTGGAGGCGCTGGATATGTCTGCATGGGAGCCCAAAGACCGGAGTATGATCTGCTCAGAACACTTCCGGAATGAAGATCTGTGCGTCACCAAGTCCGGAATGAGAAAAATCAGACATGGGGCCGTACCTATAAGTGATCagAGCTTAGAAGACTTGGATGCTCCAGCAACTTCAAGGGTGTGCAGAATCTGTTTGACAATGAATGTGAAGATGTACAATCTGCAAGAATTCGACTTAGATCAAGCTTTTGAACAACTCATGGGATCTATACCTACAGCGGAAGACAGGCTGCCCCAGAAGATCTGTTGGGAGTGCGCGGGCAGGCTGCTCAACTGCTCCCGGTTCAAAGTTAAAGCGCTCACCAGTCACGGACTGATGACGGATTTACTGTGCACTAGACAATATATTTCAATTCGCGATATAAAGTCAATCGATCGCACCTACAACAACCTTAAATCCACCCTCATCACGAAATGCTCTGACGTCAACGATTGTGACGTGCTGGTGCAGAATGACGACGTGACGTGTGACGTGTTGGTGCATGACGACGTGACGTGTGACGTGCTGGTGGACGACCAGGTCAAGACCGAGGATGAGGATGAGGAACTTAAGGAGGAAGAGAAGTTTGAGGAAGTTGTCGATAGTGGTGGGGACATTACTGTGGCGCCTATTGAGGTGGAAATAAAATGCGAGAGAGCGTGTGAGCAGACGGAGATATACTTCGAAGAGTTTCCCGACCACTTCGAGTCAGACGACGACAGGAAACTCAGTGagGTCATAGTAGAAAAGAAAGACAAAACAAAAAGCAAAGAGAAGAAattcaaaaagaagaagaaattggAGAAACTTGAGAGGAAAGTGAGAGTTAAAAAGAAAGAAGCCAAAATAGAGGAAGATGATGAGGATCCGTCTACTACTATGGATAAGTACAAAAACTCTGACGTGAAGCGTCGAAAAACCCAAGACGGTCTCGACGAATCACTGTTCACAATCACAACTCTGACATACGAGGAACAAATAGCTGAAATAGAGAAGAGACAAGAATCCACTAACTACAGAACGGCTCCATACAAGTGCACAGTTTGTTATAGAGGGTTCTTGAACAGAGACAGATATGACGCGCATTTAGTGAGACATACTGAGgcTAGCGGGGCGTACGAGTGTTTCATCTGCAAAACTCGATTGAAAACTGGTCGCGCGCTGCGGAAACATCTCACAGCGCAACACACCGAGAAGTTCAGCTGTAAAGGGTGTCCGTTTGTTACGAGAAATAGGGGCGTAGCGCGGGAGCACGAGAAGTGGCACGCGGGGGCGAAGTACCAGTGCCCGCACTGCCCCAGCGAGTTTGACAAGCTCACCACTTACATGGGGCACATACGGATAAAGCACGTGTCAGATTTCGTGTGCGAGTTGTGCGGATATACGTTCGTCTCTAAGAAGGGCATCGATGTGCACAAGAAGAAGAAACACCGCCTCGACGATAAACTGGTGCCAGAAGACGGTCCGTTTTGTACAGTGTGCGAGGTTCGGTTCATATCGGAGGAGGCGCACACCAGACATCTTAAACTGTCGTCCAGACATAGCAGCGATAATGACCCCAACCGAATTCGGAACGACTCCCAGAGTATGAACGCAGATAAGAACGGCCGAGTGATGCGGAAAATAGAGAGGAGACCTGTCATACACCCGCGGGACCCCCGGGACCCCGGGGGGCCGGAACCCACGGGTCCCGTCACCTGCGAACAGTGCAACATCCAACTGCGCGACTTGCGCCTGTACGCGCAGCACTTCAGACGCGCGCACCCCGACAAGAATCGAACCAAGTACCCCGCCATGAAGACACCCTGTATGTGCGAGCAGTGCGGACGGATCTTCCAGAGCATGGCGCTGCTGAAGGACCACATGTGGGTGCACACCGGCGAGAAGCGGTTCAAGTGCGACCGCTGCGACAAGTCCTTCACGCAGAAGACAAACCTGGTGTTCCACATGAGGGTCCACAGCAACGCGCGGCCCAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCGCATTCTTCAACAACAGGAGACGACACATGTTTGTGAGTATCCTCAGCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCGCATTCTTCAACAACAGGAGACGACACATGTTTCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGCCCCTTGTGCGGGAAACACTTCGCATTCTTCAACAACAGGAGACGACACATGTTTGTGAGTATCCTCAGCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCGCATTCTTCAACAACAGGAGACGACACATGTTTCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGCCCCTTGTGCGGGAAACACTTCGCATTCTTCAACAACAGGAGACGACACATGTTTGTGAGTATCCTCAGCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCGCATTCTTCAACAACAGGAGACGACACATGTTTCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGCAAACACTTCAACAACAGGAGACGACACATGTTTGTGAGTATCCTCAGCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCGCCTTCTTCAACAACAGGAGACGACACATGTTTCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCAACAACAGGAGACGACACATGTTTGTGAGTATCCTCAGCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGATTGCCCCTTGTGCGGGAAACACTTCAACAACAGGAGACGACACATGTTTCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGATTGCCCCTTGTGCGGGAAACACTTCAACAACAGGAGACGACACATGTTTGTGAGTATCCTCAGCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCGCATTCTTCAACAACAGGAGACGACACATGTTTCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCGCATTCTTCAACAACAGGAGACGACACATGTTTGTGAGTATCCTCAGCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCGCATTCTTCAACAACAGGAGACGACACATGTTTCACCACCAGAGCTGGTGTTCCACATGAGGGTCCACAGCCACGAGTGTCCCTTGTGCGGGAAACACTTCGCCTTCTTCAACAACAGGAGACGACACATGTTTGTGAGTATCCTCAGCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGTGGGAAACACTTCGCATTCTTCAACAACAGGAGACGACACATGTTTCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCAGGAAACACTTCAACAACAGGAGACGACACATGTTTGTGAGTATCCTCAGCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCAACAACAGGGGACGACACATGTTTCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCGCCTTCTTCAACAACAGGAGACGACACATGTTTGTGAGTATCCTCAGCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCAACAACAGGAGACGACACATGTTTCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGAAAACACTTCAACAACAGGAGACGACACATGTTTGTGAGTATCCTCAGCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCGCATTCTTCAACAACAGGAGACGACACATGTTTCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCGCCTTCTTCAACAACAGGAGACGACACATGTTTGTGAGTATCCTCAGCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCGCATTCTTCAACAACAGGAGACGACACATGTTTCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCGCATTCTTCAACAACAGGAGACGACACATGTTTGTGAGTATCCTCAGCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCAACAACAGGAGACGACACATGTTTCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCAGGAAACACTTCAACAACAGGAGACGACACATGTTTGTGAGTATCCTCAGCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCAACAACAGGAGACGACACATGTTTCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCATGTGCGGGAAACACTTCGCATTCTTCAACAACAGGAGACGACACATGTTTGTGAGTATCCTCAGCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGCCCCTTGTGCGGGAAACACTTCAACAACAGGAGACGACACATGTTTCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCGCATTCTTCAACAACAGGAGACGACACATGTTTGTGAGTATCCTCAGCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCGCCTTCTTCAACAACAGGAGACGACACATGTTTCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCGCAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCAACAACAGGAGACGACACATGTTTGTGAGTATCCTCAGCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGCCCCTTGTGCGGGAAACACTTCAACAACAGGAGACGACACATGTTTCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCGCAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCAACAACAGGAGACGACACATGTTTGTGAGTATCCTCAGCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCAACAACAGGAGACGACACATGTTTCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCAACAACAGGAGACGACACATGTTTGTGAGTATCCTCAGCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCGCAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCAACAACAGGAGACGACACATGTTTCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCAACAACAGGAGACGACACATGTTTGTGAGTATCCTCAGCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCGCAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCAACAACAGGAGACGACACATGTTTCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCAACGCGCGGCCCAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCGCCTTCTTCAACAACAGGAGACGACACATGTTTGTGAGTATCCTCAGCACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGCCCCTTGTGCGGAAACACTTCAACAACAGGAAACGACACATATTTGTGACACCAGCAGAGCTGGTGTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCGCCTTCTTCAACAACAGGAGACGACACATGTTTGTGAGTATCCTCAGCTTCCACATGAGGGTCCACAGCTACGAGTGTCCCTTGTGCGGGAAACACTTCGCATTCTTCAACAACAGGAGACGACACATGTTTGTGAGTATCCTCAGCAGAGCTGGTGTTCCACATGAGGGTCCAGCTGCGTCAAGAGCGTCATAA
Protein Sequence
MRCSVPNCTNDTKRTPIGQGISFHQFPKEPNLRSSWVEALDMSAWEPKDRSMICSEHFRNEDLCVTKSGMRKIRHGAVPISDQSLEDLDAPATSRVCRICLTMNVKMYNLQEFDLDQAFEQLMGSIPTAEDRLPQKICWECAGRLLNCSRFKVKALTSHGLMTDLLCTRQYISIRDIKSIDRTYNNLKSTLITKCSDVNDCDVLVQNDDVTCDVLVHDDVTCDVLVDDQVKTEDEDEELKEEEKFEEVVDSGGDITVAPIEVEIKCERACEQTEIYFEEFPDHFESDDDRKLSEVIVEKKDKTKSKEKKFKKKKKLEKLERKVRVKKKEAKIEEDDEDPSTTMDKYKNSDVKRRKTQDGLDESLFTITTLTYEEQIAEIEKRQESTNYRTAPYKCTVCYRGFLNRDRYDAHLVRHTEASGAYECFICKTRLKTGRALRKHLTAQHTEKFSCKGCPFVTRNRGVAREHEKWHAGAKYQCPHCPSEFDKLTTYMGHIRIKHVSDFVCELCGYTFVSKKGIDVHKKKKHRLDDKLVPEDGPFCTVCEVRFISEEAHTRHLKLSSRHSSDNDPNRIRNDSQSMNADKNGRVMRKIERRPVIHPRDPRDPGGPEPTGPVTCEQCNIQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPCMCEQCGRIFQSMALLKDHMWVHTGEKRFKCDRCDKSFTQKTNLVFHMRVHSNARPSYECPLCGKHFAFFNNRRRHMFVSILSTSRAGVPHEGPQLRVSLVRETLRILQQQETTHVSPAELVFHMRVHSYECPLCGKHFAFFNNRRRHMFVSILSTSRAGVPHEGPQLRVSLVRETLRILQQQETTHVSPAELVFHMRVHSYECPLCGKHFAFFNNRRRHMFVSILSTSRAGVPHEGPQLRVSLVRETLRILQQQETTHVSPAELVFHMRVHSYECPLCGKHFNNRRRHMFVSILSTSRAGVPHEGPQLRVSLVRETLRLLQQQETTHVSPAELVFHMRVHSYECPLCGKHFNNRRRHMFVSILSTSRAGVPHEGPQLRLPLVRETLQQQETTHVSPAELVFHMRVHSYDCPLCGKHFNNRRRHMFVSILSTSRAGVPHEGPQLRVSLVRETLRILQQQETTHVSPAELVFHMRVHSYECPLCGKHFAFFNNRRRHMFVSILSTSRAGVPHEGPQLRVSLVRETLRILQQQETTHVSPPELVFHMRVHSHECPLCGKHFAFFNNRRRHMFVSILSTSRAGVPHEGPQLRVSLVWETLRILQQQETTHVSPAELVFHMRVHSYECPLCRKHFNNRRRHMFVSILSTSRAGVPHEGPQLRVSLVRETLQQQGTTHVSPAELVFHMRVHSYECPLCGKHFAFFNNRRRHMFVSILSTSRAGVPHEGPQLRVSLVRETLQQQETTHVSPAELVFHMRVHSYECPLCGKHFNNRRRHMFVSILSTSRAGVPHEGPQLRVSLVRETLRILQQQETTHVSPAELVFHMRVHSYECPLCGKHFAFFNNRRRHMFVSILSTSRAGVPHEGPQLRVSLVRETLRILQQQETTHVSPAELVFHMRVHSYECPLCGKHFAFFNNRRRHMFVSILSTSRAGVPHEGPQLRVSLVRETLQQQETTHVSPAELVFHMRVHSYECPLCRKHFNNRRRHMFVSILSTSRAGVPHEGPQLRVSLVRETLQQQETTHVSPAELVFHMRVHSYECPMCGKHFAFFNNRRRHMFVSILSTSRAGVPHEGPQLRVPLVRETLQQQETTHVSPAELVFHMRVHSYECPLCGKHFAFFNNRRRHMFVSILSTSRAGVPHEGPQLRVSLVRETLRLLQQQETTHVSPAELVFHMRVRSYECPLCGKHFNNRRRHMFVSILSTSRAGVPHEGPQLRVPLVRETLQQQETTHVSPAELVFHMRVRSYECPLCGKHFNNRRRHMFVSILSTSRAGVPHEGPQLRVSLVRETLQQQETTHVSPAELVFHMRVHSYECPLCGKHFNNRRRHMFVSILSTSRAGVPHEGPQLRVSLVRETLQQQETTHVSPAELVFHMRVHSYECPLCGKHFNNRRRHMFVSILSTSRAGVPHEGPQLRVSLVRETLQQQETTHVSPAELVFHMRVHSNARPSYECPLCGKHFAFFNNRRRHMFVSILSTSRAGVPHEGPQLRVPLVRKHFNNRKRHIFVTPAELVFHMRVHSYECPLCGKHFAFFNNRRRHMFVSILSFHMRVHSYECPLCGKHFAFFNNRRRHMFVSILSRAGVPHEGPAASRAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01501201;
90% Identity
iTF_01501201;
80% Identity
iTF_01501201;