Tabs022902.1
Basic Information
- Insect
- Tuta absoluta
- Gene Symbol
- Zfy1
- Assembly
- GCA_029230345.1
- Location
- CM055299.1:494172-497143[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2.7 2.7e+02 3.4 2.6 2 23 75 96 74 96 0.95 2 19 0.5 49 5.7 0.1 6 23 108 126 108 126 0.95 3 19 0.069 6.7 8.4 0.1 3 23 135 156 133 156 0.92 4 19 7.9e-05 0.0077 17.7 0.5 2 23 182 203 181 203 0.97 5 19 1.7e-06 0.00017 22.9 0.2 1 23 209 232 209 232 0.97 6 19 0.026 2.5 9.8 0.1 2 23 239 260 238 260 0.95 7 19 6.6e-06 0.00064 21.1 2.6 1 23 266 288 266 288 0.98 8 19 0.27 26 6.6 3.0 1 23 442 464 442 464 0.95 9 19 0.00025 0.024 16.1 2.0 2 23 471 493 470 493 0.92 10 19 8.1e-06 0.00079 20.8 3.2 1 23 499 521 499 521 0.97 11 19 1.4e-06 0.00013 23.2 4.4 1 23 527 549 527 549 0.98 12 19 0.00027 0.026 16.0 1.7 1 23 555 577 555 577 0.97 13 19 1.9e-05 0.0019 19.6 6.4 1 23 583 605 583 605 0.97 14 19 0.5 49 5.7 0.3 3 23 664 683 663 683 0.95 15 19 7.7e-07 7.5e-05 24.0 0.8 1 23 689 712 689 712 0.96 16 19 1.5e-07 1.5e-05 26.3 2.5 1 23 718 740 718 740 0.96 17 19 1.7e-05 0.0016 19.8 0.2 1 23 746 768 746 768 0.98 18 19 2e-05 0.002 19.5 0.0 1 23 774 796 774 796 0.97 19 19 0.002 0.2 13.3 0.4 6 23 806 823 805 823 0.99
Sequence Information
- Coding Sequence
- atgaAATATGTGTGCCTTAAATGCCCTGAAGAACCCAGTTCAGAAACTCTCGAGGACTTTAACAAACACGTTCTCTTAGTCCATGCAAAAGAAGCTGAAAATAAAGAATCTTTAGAAGAATTCCTAAAAGAAAACACAACTTTTGAAGAACAACTGTCGATGGACGATACAGATATTCATATGGAATCTGATGACGAAACTTTGGTTGCATTACCTGAGCTACATTGTCCTTTTTGCGTGAGCGTCTTTTCAGCAAGCAGACGTCTGCTACACCACCTTAACCAACATTCGGAAGAAAATATAGAGAACATATTCATATGCTGCAATACTTCATACTCTGATAAAATAGAGTATGTGAAGCATTTACAGGAAAAACACTCGAATGCAGTAATATCAACAAACTGTAAATCTTGTGGTTACACTGGAAAAACAATCGAAGATCTACAAGAACACATAACTGAAGCACATGGAGATAACGATAAACCAAAAGAAAAAGAAGGCAAAAAGAAGAAAAGCACAAAAAATCAGAAATACATCCCAGTGCCTTGCCCAGAATGCAACCAAATGTTCAGCAACAAATACCGCATGCAAATACATTTAAAGAGACATACAGTAACAGAAAGATACGTTTGCGATCAATGCGACAAAAGTTACAGCAACTTAGGTAATTTGACAGTCCATAGGAAAGTAGTCCATGAAGGAATATTGAAGATTCATTGCTCCGTCTGTGGAGAAGCGTTTCCGTCCCGAGCCACGCGCGACGCTCATTTACTAATCCATACTAACGAAAGACCGTTTACCTGCGAGTTTTGCAATAAATCTTTCACCACAAAACTGACACTCACTCGCCACTTAGAAATGCACCTAGACATAAGAAAGTTCAAGCCCTGCCGATACACTGATACAACCCTGGATGGACTAATCAAGGACGAatatgaaatagaaatagaCTTCGGAGCCGATGACTCTGATGGAGACAACCAAGGCGCTGATCAAAGAgtatctgatgatgatgataatgaaccACTATCTTCTTTAGCAACAACCAAAAAAGCAGATCTTTACAATAAATTTTACGAGGCATTATTGAACTTTAAGAACCATTTCACTAATGAACATAAAGCAAGAAGTAATCAAAACGTGACAGACTCCAGTGACTCAGAATTGGTCGACGAAGAATTCAATACGAACGATGAGTCGGACAAAGAAGATTTAGACATCTACGACGATTTGACACAAAGCAATATGAGGAAAGACAGAATGGACGAAGAGACACGATTAGAACTGATTCAGGTGCAAACAAAAATCAACGGAAAAGTTTATTACAACTGCAGAATATGCGGAAAGAACCTAAGTTCATCGCACACGTACGTGTTCCACAAACGAATACACACGGGAGAGAGGCCGTGCGTTTGTCACATCTGTGGGAAACAGTTCCGAGCGCCGAACGGTCTTCAGCGGCACTTGACAGAAACACACGAGAAAGTCAGGCGGCATTCCTGCAGATTCTGCCCGAAAAACTTCGCCAACTCGCAGAATCTCAAACAGCATATGCGTATACATACAGGCGAGCGACCTTTCGTCTGCTCCCATTGTGGGAAAAGATTCACCCAAAGCGGTTCCTTACACGTCCATCTAAAAACACACAGCGAACAATTTCCGCATCAATGCGCCGAATGCGGAGCCAAATTTAGACTGAGATCTGGACTAACCAGACACAAATTGAAGCACACTGGTGAAAGACCCCACACTTGTTTGCATTGCGGCAAAGGATTCAGACAGAAACACGAGCTCAACAGCCACATGCTGTCACACAGTGATTCAAAGCCTTTTACTTGCCAACAAATAAGTAAAGCATTCGCTGACGAAGTAAAAGTAGAAATTGAAACCAAACAAGACTCAAAAGATTTCGAAATAAACGATTCTGAGGAAACTCCTCAAAAACACCTGACAGTTACTGTATCTGCAAACGGAAAGAAATATGTCGCATGTGAATTTTGTAAGAAAAGTATCACGATCGCTTCGTGGAGGAGGCACATTAGACTACATCAGGGAGAGAAAAGGTACAGCTGTCATACTTGTGGACTTAGCTTCAGTGATAGTGGAAACCTAGCGAGACACACgcgagcgttgcataccttacAACGACCGCACGCGTGCCCGGTCTGCCCAAAGACATTCTCCAGAAACAGCCATCTTCAAGACCACATCAAATCTCACTCAGAAAACAGAGAATACATCTGTGATTTGTGCGGAAAAGCCTCCAAATCCAGTGCAGCTTTGAGAATGCATCGGAGAACGCACGGAAGTGAACACAAGTTTGAGTGCATGGAGTGCGGGGCGGTGTTCAAGAGGCGAGGGGAGTTAAATGCGCATGTGAGCGTGCATACGGGGGAGCGCGCGCATGTGTGTGCGTGCGGACGCGCTTTCAGGCTTAAGAGTCAATTAACGGCTCATTCTAGGCGACACAAAACTTTGGACGACGGCACAAATGATACTCGACAAATTGCAAAGAGTGACAATACCTGA
- Protein Sequence
- MKYVCLKCPEEPSSETLEDFNKHVLLVHAKEAENKESLEEFLKENTTFEEQLSMDDTDIHMESDDETLVALPELHCPFCVSVFSASRRLLHHLNQHSEENIENIFICCNTSYSDKIEYVKHLQEKHSNAVISTNCKSCGYTGKTIEDLQEHITEAHGDNDKPKEKEGKKKKSTKNQKYIPVPCPECNQMFSNKYRMQIHLKRHTVTERYVCDQCDKSYSNLGNLTVHRKVVHEGILKIHCSVCGEAFPSRATRDAHLLIHTNERPFTCEFCNKSFTTKLTLTRHLEMHLDIRKFKPCRYTDTTLDGLIKDEYEIEIDFGADDSDGDNQGADQRVSDDDDNEPLSSLATTKKADLYNKFYEALLNFKNHFTNEHKARSNQNVTDSSDSELVDEEFNTNDESDKEDLDIYDDLTQSNMRKDRMDEETRLELIQVQTKINGKVYYNCRICGKNLSSSHTYVFHKRIHTGERPCVCHICGKQFRAPNGLQRHLTETHEKVRRHSCRFCPKNFANSQNLKQHMRIHTGERPFVCSHCGKRFTQSGSLHVHLKTHSEQFPHQCAECGAKFRLRSGLTRHKLKHTGERPHTCLHCGKGFRQKHELNSHMLSHSDSKPFTCQQISKAFADEVKVEIETKQDSKDFEINDSEETPQKHLTVTVSANGKKYVACEFCKKSITIASWRRHIRLHQGEKRYSCHTCGLSFSDSGNLARHTRALHTLQRPHACPVCPKTFSRNSHLQDHIKSHSENREYICDLCGKASKSSAALRMHRRTHGSEHKFECMECGAVFKRRGELNAHVSVHTGERAHVCACGRAFRLKSQLTAHSRRHKTLDDGTNDTRQIAKSDNT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -