Tabs032034.1
Basic Information
- Insect
- Tuta absoluta
- Gene Symbol
- -
- Assembly
- GCA_029230345.1
- Location
- CM055308.1:8783288-8786120[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00051 9.8 7.1 0.0 108 154 93 142 76 148 0.82 2 8 0.069 1.3e+03 0.1 0.1 142 154 150 162 144 168 0.85 3 8 0.00061 12 6.8 0.3 142 159 170 187 165 194 0.86 4 8 0.00012 2.2 9.2 0.1 136 159 211 234 199 242 0.83 5 8 8.4e-05 1.6 9.6 0.1 136 159 258 281 246 289 0.83 6 8 0.0001 1.9 9.4 0.1 136 159 305 328 293 336 0.83 7 8 0.0001 1.9 9.4 0.1 136 159 352 375 340 383 0.83 8 8 0.011 2.1e+02 2.7 0.0 136 155 399 418 387 427 0.84
Sequence Information
- Coding Sequence
- ATGTGTCATGTTTCAGTCGGCCGCGGTGCCGACTCGCTTCTACgcgtgcggcggcggcggtacgTGCGGAGCGCAGTGGACCGGCGTATACGCACGCTGCTGCAGCTGATGATcgcatgcccagcagtggactgtagcTCGGCCGCGGTGCCGACGCGCTTCTACGCGTGCGGGTGGGAGAGCGCAGTGGACCGGCGTACACGCACGCTGCTGCAGCTGATGATCGCGCGAGCGCAGGAGACGCGCGCCATCACCGCCATGGGGATGATGACATTCGACATGGAACTGTTCGTCCAGCCTAATTCAAGTACTCACCGCCTGGTTGGTGTGGTAGAAGAAGTCGTGCAGGATGTCGAAGATGCTGGTCTCCGAGAGGATCAGCTTCTGAAGGTTCTCCGGCTGTCACTACAGCACTGCGGCTGTCACTACAGCACTGCGGCTGTCACTACAGCACTGCGGCTGTCACTACAGCACTGCGGCTGTCACTACAGCACTGCGGCTGTCACTACAGCACTGCGGCTGTCACTACAGCACTGCGGCTGTCACTGTGTCCAGTATAAACAAGTGTCGACTCACCGCCTGGTTGGTGTGGTAGAAGAAGTCGTGGAGTATATCGAAGATGCTGGTCTCCGAGAGTATCAGCTTCTGAAGGTTCTCCGGCTGTCACTACAGCACTGCGGCTGTCACTGTGTCCAGTATAAACAAGTGTCGACTCACCGCCTGGTTGGTGTGGTAGAAGAAGTCGTGGAGTATATCGAAGATGCTGGTCTCCGAGAGGATCAGCTTCTGAAGGTTCTCCGGCTGTCACTACAGCACTGCGGCTGTCACTGTGTCCAGTATAAACAAGTGTCGACTCACCGCCTGGTTGGTGTGGTAGAAGAAGTCGTGGAGTATATCGAAGATGCTGGTCTCCGAGAGGATGAGCTTCTGAAGGTTCTCCGGCTGTCACTACAGCACTGCGGCTGTCACTGTGTCCAGTATAAACAAGTGTCGACTCACCGCCTGGTTGGTGTGGTAGAAGAAGTCGTGGAGTATATCGAAGATGCTGGTCTCCGAGAGGATGAGCTTCTGAAGGTTCTCCGGCTGTCACTACAGCACTGCGGCTGTCACTGTGTCCAGTATAAACAAGTGTCGACTCACCGCCTGGTTGGTGTGGTAGAAGAAGTCGTGGAGTATATCGAAGATGCTGGTCTCCGAGAGGATCAGCTTCTGAAGGTTCTCCGGCTGTCACTACAGCACTGCGGCTGTCACTACAGCACTGCGGCTGTCACTGTGTCCAGTATACACAAGTGTCGACTCACCGCCTGGTTGGTGTGGTAG
- Protein Sequence
- MCHVSVGRGADSLLRVRRRRYVRSAVDRRIRTLLQLMIACPAVDCSSAAVPTRFYACGWESAVDRRTRTLLQLMIARAQETRAITAMGMMTFDMELFVQPNSSTHRLVGVVEEVVQDVEDAGLREDQLLKVLRLSLQHCGCHYSTAAVTTALRLSLQHCGCHYSTAAVTTALRLSLQHCGCHCVQYKQVSTHRLVGVVEEVVEYIEDAGLREYQLLKVLRLSLQHCGCHCVQYKQVSTHRLVGVVEEVVEYIEDAGLREDQLLKVLRLSLQHCGCHCVQYKQVSTHRLVGVVEEVVEYIEDAGLREDELLKVLRLSLQHCGCHCVQYKQVSTHRLVGVVEEVVEYIEDAGLREDELLKVLRLSLQHCGCHCVQYKQVSTHRLVGVVEEVVEYIEDAGLREDQLLKVLRLSLQHCGCHYSTAAVTVSSIHKCRLTAWLVW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -