Tabs009509.1
Basic Information
- Insect
- Tuta absoluta
- Gene Symbol
- cdc5l
- Assembly
- GCA_029230345.1
- Location
- CM055288.1:2459995-2460946[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-18 6.9e-15 56.0 1.8 2 46 9 54 8 54 0.97 2 2 4.7e-13 8.3e-10 39.7 0.1 1 45 60 103 60 104 0.93
Sequence Information
- Coding Sequence
- ATGCCGCGGATTATGATAAAGGGCGGCGTTTGGCGCAACACCGAGGATGAAATCCTTAAAGCGGCGGTgatgaaatatggcaaaaaccAGTGGAGTCGTATTGCTTCGCTTCTGCATCGCAAATCGGCTAAGCAATGCAAGGCCCGGTGGTACGAGTGGCTGGATCCGAGTATCAAGAAGACGGAATGGTCCCGCGAGGAGGACGAGAAGCTGCTGCACTTGGCCAAGCTGATGCCGACGCAGTGGCGGACCATAGCTCCCATCATTGGCCGGACTGCTGCACAATGTTTGGAAAGATATGAATACCTTTTGGACCAAGCTCAAAAGAAGGAAGAGGGGGAAGATATGGGCGATGACCCTCGCAAGCTGAAGCCTGGCGAGATTGACCCTAACCCTGAAACCAAGCCTGCCAGACCTGACCCCAAGGATATGGATGAAGATGGTACACATATAAGCTcctaa
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDMGDDPRKLKPGEIDPNPETKPARPDPKDMDEDGTHISS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01437925;
- 90% Identity
- iTF_00780969;
- 80% Identity
- iTF_00034683;