Basic Information

Insect: Tuta absoluta
Gene Symbol: -
Assembly: GCA_029230345.1
Location: CM055292.1:11941193-11943049[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.1e-09 9.8e-07 29.5 0.0 2 44 19 61 18 62 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.1e-09	9.8e-07	29.5	0.0	2	44	19	61	18	62	0.93

Sequence Information

Coding Sequence: ATGGTTCGCACATACAAGAAAACGCCAGGGACGCGAAATTATAGAAACTACAGTGATGAGACTTTAGAGGAGGCTCTTCAGAAAATTACTAATGATGAGCTATCGATCAATGCAGCATCTATACAATATCACATCCCATTTGGGACTTTGTACAACAAATTTAAAGGACAATATGGAAAATCTCCCGGTGGACAGCCTGTTTTTAGCCACACAGAAGAAATTTCCATTTTACGTGCCGCTTCCACGTGCGCTGACTGGGGATTCCCTTTGACATTGTTAGATCTTCGTTTttatgcaaaatattatttggaTAAACAAGGAAAGGTAGTGGAACGTTTCAAGAATAATTTACCTGGCGTAGAGTGGGCCGTAAGTGTGTTAAAACGTCACAAAAACACACATGGTCAAAGGATTTCAACTAATATTAAAAGATCAAGGGCTTCGGTAGGGAGAGAGTCGATCAACAGATATTTCGATAACATTGAATCTGAATTGAAAGATGTTCCACcaagcaatatttttaattatgacGAAACGAATATGGCCGACGATCCTGGGAAGAAAAAATGCATATACAGGAGAGGTGTCAAGTACCCAGAGAAGGTCATGAATTTTTCAAAAAGTAGCACAACCGTAATGGTGTGTGGTTCAGCAGATGGAACCCTTCTGCCACCTTACGTCATTTATAAAAGTACACATTTGTATGACACATGGAAGGAGAGAGGAATTGTTGGTGCCCCATGCTGTGAAGAATCATGTTGTAGCCGAGGGTCCCGGTACAACAGAACCACCTCAGGTTGGATTGACGCTCCAACATTTAGAGACTGGTTAATGACATGTTTTTTGCCTCATGCTAAGAGGCTCGAAGGCCGGAAAGTATTAATTGGCGACAACCTTTCGTCGCATTTTGATGATGACGTGATTGCTGTATGTGAAGCAAACAACATCAGCTTCGTTTGTTTGGTGCCAAACTCCACCCATTTGTGTCAGCCACTTGACGTAGGGTTCTTTAGACCGATGAAGACTACTTGGAGGCAAACACTCGAAAATTGGAAAAAATCTCATCTGAAAGCTACAACGGTGCCTAAAGAATCATTTCCGTCTTTATTAAGGCAAGCAATATTAGATATGGACAAAAAACCATCAAAGAATGATGCTCCTTCCGAGCCGTCGGCCGTAAAACGGGATTTGATCTCCAGTTTCAAAGCTACGGGAATTTATCCTCTAGACCGTGAAAGAGTTCTGAAAAAATTGCCTGAGGTTTCTCCATCGCCTGAAATAGACACTGTAGTTCGCGATTCTTTGACAGAATTTTTAAGGGAACAACGTTACGGCCAACAATCAGAGCCATCTCGAAAGAAAAAAAGGCTAAATGTTGAGCCAGGAAAAAGTGTTTCTACTCTGGATTCGCCATCATGCTCTGATATGAATCAAGATCATGATAAACCTGACGAAACCGGAGAGCATTCCTCTGTTTCACCAGTTGCTACGAATTCACACAgccaaataaatacaaatgagACTGCAAATGATGATCAGTCTGATTATGAATCTGAAAACGAGCTAAATGATAGTCGTCCTAGGGGCCCCGCAGTAGGTCAATTCGTCCTGGCGAAATTTAACTCGACGAAAGGAAAGAAAACATATCATTATTTATGCTCCATTGAAGAAGTTAGTGAGGATAAATTAGTAGTACAGGGCTACAAATCACAAAAAAAGTCGAAACAAATTTTTCGGGTGGTTCCTGATGACTTATCAATTATAGAGGAAACTGATATTATTATGTATCTTCCATCACCAAAATTTCAAGATGAAAGCTACATTTTTCCAACTCAAGTGATGGTTAAGGAGGTGTGA
Protein Sequence: MVRTYKKTPGTRNYRNYSDETLEEALQKITNDELSINAASIQYHIPFGTLYNKFKGQYGKSPGGQPVFSHTEEISILRAASTCADWGFPLTLLDLRFYAKYYLDKQGKVVERFKNNLPGVEWAVSVLKRHKNTHGQRISTNIKRSRASVGRESINRYFDNIESELKDVPPSNIFNYDETNMADDPGKKKCIYRRGVKYPEKVMNFSKSSTTVMVCGSADGTLLPPYVIYKSTHLYDTWKERGIVGAPCCEESCCSRGSRYNRTTSGWIDAPTFRDWLMTCFLPHAKRLEGRKVLIGDNLSSHFDDDVIAVCEANNISFVCLVPNSTHLCQPLDVGFFRPMKTTWRQTLENWKKSHLKATTVPKESFPSLLRQAILDMDKKPSKNDAPSEPSAVKRDLISSFKATGIYPLDRERVLKKLPEVSPSPEIDTVVRDSLTEFLREQRYGQQSEPSRKKKRLNVEPGKSVSTLDSPSCSDMNQDHDKPDETGEHSSVSPVATNSHSQINTNETANDDQSDYESENELNDSRPRGPAVGQFVLAKFNSTKGKKTYHYLCSIEEVSEDKLVVQGYKSQKKSKQIFRVVPDDLSIIEETDIIMYLPSPKFQDESYIFPTQVMVKEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -