Tabs033689.1
Basic Information
- Insect
- Tuta absoluta
- Gene Symbol
- -
- Assembly
- GCA_029230345.1
- Location
- JARDXI010000030.1:2060115-2060507[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.9e-11 8.7e-08 32.8 0.0 2 44 19 61 18 62 0.93 2 2 6.3 5.5e+03 -1.7 0.0 15 24 72 81 70 82 0.80
Sequence Information
- Coding Sequence
- ATGGTTCGCACATACAAGAAAATGCCAGGGACGCGAAATTATAGAAACTACAGTGATGAGACTTTAGAGGAGGCTCTTCAAAAAATTACTAATGATGAGCTATCGATCAATGCAGCATCTATACAATATCACATCCCATTTGGGACTTTGTACAACAAATTTAAAGGACAATATGGAAAATCTCCCGGTGGACAGCCTGTTTTTAGCCACACAGAAGAAATTTCCATTTTACGTGCCGCTTCCACGTGCGCTGACTGGGGATTCCCTTTGACATTGTTAGATCTTCGTTTttatgcaaaatattatttggaTAAACAAGGAAAGGTAGTGGAACGTTTCAAGAATAATTTACCTGGCGTAGAGTGGGCCGTAAGTGTGTTAAAACGTCACTAA
- Protein Sequence
- MVRTYKKMPGTRNYRNYSDETLEEALQKITNDELSINAASIQYHIPFGTLYNKFKGQYGKSPGGQPVFSHTEEISILRAASTCADWGFPLTLLDLRFYAKYYLDKQGKVVERFKNNLPGVEWAVSVLKRH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -