Tabs019786.3
Basic Information
- Insect
- Tuta absoluta
- Gene Symbol
- kn
- Assembly
- GCA_029230345.1
- Location
- CM055296.1:7661851-7679859[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-141 7.4e-138 461.5 0.0 182 387 112 335 110 340 0.99 2 2 9e-08 0.00058 19.4 3.4 421 469 345 395 336 489 0.69
Sequence Information
- Coding Sequence
- ATGATAAAGAAATACAAATTGATACAAAATGAGAAGCTGGAAGTAACTCAGAGACAATACTTGCACCAAAAGACTATAAAAATGGAGAAAGACATGAAAAACATTACTAAAGATGAAAAAGAATaccaaataaattttaatgagcATATTAAGGAAGGGGAATTCGAAATAAAAGTTAATCATTTAGATCCAAATAAAAGGGAAGAAATTAGCAAATTGATACAACAACATAAATCAGTATTTGCCAAAGACAAGTATGATATAGGAACAGTTAATGGATATGAAGCAAGAATAGATTTATTAGTGGACAAATACTGCAGCAAAAGGCCTTATAGatTTTTTCTCAAGTTCTTCTTGAAATGTAATCAGAACTGTTTGAAGAATGCCGGTAACCCGAGGGACATGAGAAGGTTTCAGGTGGTGATATCGACGCAAGTGATGGTGgacggtccactgctggccatCTCGGACAACATGTTCGTCCACAACAATAGCAAACATGGCCGCCGGGCCAAAAGGCTGGACCCCACTGAAGGTATTGAAGCAGCGCCTGAACCCTCCTCGGGTCTGTACCCCCCGTTGCCGGTCGCTACACCTTGCATCAAAGCGATATCTCCGAGCGAAGGATGGACGTCGGGAGGATCTACAGTCATCATAGTAGGGGACAACTTCTTCGACGGACTACAAGTTGTCTTTGGAACTATGCTGGTTTGGAGCGAGTTAATAACATCGCATGCGATACGAGTGCAGACGCCGCCGAGACACATACCGGGGGTGGTCGAAGTCACGCTCTCGTATAAGAGCAAACAGTTCTGCAAAGGCGCACCGGGCAGATTCGTTTATGTTTCAGCACTGAACGAGCCCACGATAGATTACGGCTTCCAGAGGCTACAGAAACTTATACCCAGGCATCCCGGTGATCCGGAAAAGTTACCAAAGGAAATCATCCTAAAGCGAGCAGCGGACTTAGCAGAGGCGTTGTATTCGATGCCTCGCAACAACCAGCTCGGTCTTGGCGCCCCTCGGTCGCCCCCCTCGAGTATGCCCTTCAACTCCTACACTGGTCAGCTGGCCGTCAGCGTGCAGGATACTGCAGCCAGTCAGTGGACTGAAGAAGAGTACGCGCGCAGCGGCGGCTCGGTGTCCCCCAGATACTGTTCAGCCGCGTCGACTCCTCACGCCGCGCCCGGTGCCTACCCTCATCCGCAACACTACCCCGCACCGCCCACGTCGCTCTTCAATACAAGCTCACTGTCACTCGGCCCGTACCACCCAGCCAACGTGAATGGACACTTATCTGACCACTATAACGTGTATAACACGAAAGATAGCGGACATTATGAAAGAAATTCTAAACCATCCGACTGTCCTGTAAACACTCATTCGAGAGAAATGAAAGAGGATAAAGGCAAGAGGAGCGCCTTTGCCGTAGTGAGGCACAGTCCGCCCCACACTCCGCATAACTGGCAGCTCGCTGTTCAATTATCATCGCCGTTCAGCGTGAATCCCTTCTCCTTGCCGACTTGCAGCGCCCAGCAGTACGCACAGACAGCGCCTTTAGCGTCCAAGTAA
- Protein Sequence
- MIKKYKLIQNEKLEVTQRQYLHQKTIKMEKDMKNITKDEKEYQINFNEHIKEGEFEIKVNHLDPNKREEISKLIQQHKSVFAKDKYDIGTVNGYEARIDLLVDKYCSKRPYRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIEAAPEPSSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPSSMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPGAYPHPQHYPAPPTSLFNTSSLSLGPYHPANVNGHLSDHYNVYNTKDSGHYERNSKPSDCPVNTHSREMKEDKGKRSAFAVVRHSPPHTPHNWQLAVQLSSPFSVNPFSLPTCSAQQYAQTAPLASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00036409;
- 90% Identity
- -
- 80% Identity
- -