Tabs033044.1
Basic Information
- Insect
- Tuta absoluta
- Gene Symbol
- arid5b
- Assembly
- GCA_029230345.1
- Location
- CM055310.1:3642987-3668190[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-12 6.6e-09 37.1 0.0 3 89 250 326 248 326 0.87
Sequence Information
- Coding Sequence
- ATGGTAAATTTTTCTATGGGGGTGAGCCACAGAGCACAGACAATTCATGCGCTGTCACCCCCCGCGCGACTTCTTTGCTCTTTGGGGgACGAAGTGCTAGCCCTAAACGAGAAGGTGGTCATCCGCGCCGACGACTTGCTCTCCTGGATATCTGATGGCGTCAGCTGGCGGTGCGGCCTGCGGGCAGTGTGGCGCGGGGCCTGCGCCCCCCCGAGCAAAGCGGCCCCGGCGCCGCCCTCGGAGCCCCTGCACCACACACAGCTCGACTTCAGCGACGTGGATAAGGAGAAGAGCACTATGGAGCCAGACACGAATTCTCCGGGCGTAGTGGTGTTCTCTTACCCGCGGTACTGTCGCTACCGGGCGCTCCTGGCGCGCTTAGAGGGAATGCAGTCGGCTTGGCTGAGGGATTCCCTGGTCGCGGCTCTGGGAGGGTACGCGGCTGCCACCAACAACACCTGCATCTTGTACTGCAAGGACACATTCGAGTACCCAGAACTGGAGGGTCACGAGTTCGTGTGCAACCACCTGGCGCCGCGGCTGAAGGGCAGGCCGCGCGGCCGGCGCCGCCGCCTGCACCGCTCCCGCTCGCACAGTCGCTCCTCCCGCTCTAGCGACAGCGAGGCCACGCCCCCGCAACAACGGCCACAGCAGAAGATATCCCCGCGGCGCCTGTCCCTGCGCAACGGCTCGTCTGACAAGCAGAGCGAGGCTGAAGCCGACGACGAGGAGACCAGCCCCGAGGACCTGGAGTTCCTTCATCAGCTCAAGCAGCACTACATCGCCCAGGGCGTCTCGCCGCGGAACCTCTCCGTCATACACGGCCTCAAGGACTTATCGCTACGATCTCTGTACAACGCAGTATCATCACTCGGGGGTTACGAAGCGGTGTGTCGAGACAAGTTGTGGCGGAAGGTGCACCCCTCAAGGCCTGGCAAAGCGAGGGGGCTGTATGTCAGATACCTCCGTCCGTACGAGAGCCACGAGCGAAGCAATGGCCGACTGAAACCCAACGGGAAAGTTGACGACAACAATATCGTCACCATCCACTTGCCCGACTCGCCCAAGCAAGAAAGTAaaGACTGTAAAGAAGAGAAGCCAGACGTGACCAGCCAGGTCGGTCATGGTGGTCAGCCAGTCGCGAGCGCGGAGGAATTAAATCGTCAGTTTCTCGATTCCATCTCCAGCGACGTGAAGAATGTTAAAGAGGATGTGAAACCGTTGATCAGCGTGAAACCGCCGCAACTGCTTATAGACCCAGACAAGCAGAAGCAGAGCGTGATAAAGTTGTTTGAAGAGAACAGTGGATTAGTTGCGGAGTTGAGCGCCAAATATAATGTAGCCGACGATAAAGTTATAGAAGAGGTGGGCGTTCGTAAGTTGAGCGATGGCAGCTGTCAGTTGCTGGGCGAACTCGCGAGGAGGCTTCAACCAGGGAACACCGACGCGACATTCCTTAAGGAGCTCGCCGGGCAGGATCTCTCCAACAACGCGCTCTCCAGTCTGTCCAGCCTCGTGAACGGAGCCAACCCCGACCAGCGCTCCCGGCCGCTCGGTCGCAGTTCGTTGCGTCACGTCCGCGTGAAGCCCACGAGACCGCCCACAGCCAACACCACGCCGGTGCCCCGTTCGGATTCGAACTCGAACCCTTCCCCACCGAGTTCCGGGAGTGCAACCAGTGTGCCGCCGGTCACCAACTTCGGCATCCACCATCCGCAGCCGAGGCAGCAGCCGCCAGACGATGACGTCATACAGGTACCTTACAAGCCTAAGACGCCAGAGATCATTGACCTGGACGAGTACCCAGAGAGCCCACAATCACCCAAGAAGAAGAAACTCGACATCCTCAAGGAGCGCGGGCTagaagtgacagctgtcaacccTGCTCCCCCCGCAGCGGTCTGGCCGACCAATCCCCCCCTACTCCTCAATCCGGCAGTCCAGCATCAGATAATGACGCAGGCGAGTCTCTTCCAAATGTACAACATCATTCCGCAAAATTACGCCAACGGAATACAACCACCGAGGGTCATACAGTCCACTTGTTTATACGGAACCGGCTCGCCAGAGAAGACCGTCTACGGAAACCCTAAGGATCCCTTCATGCCGCCGCCCCACGTTTTCCAAGGGACCCCTATTAAGCCTCAGAGAACTGTCACTAGCGATAAAGTCGATATCGTGCCAACTAGCCGCGACATTCTCGATTTAACGTGTAAGAATGCGGTGAAACCAACGGTAGAAATAGTTAAGGTGCCGTCAGTACCGTCGCCGTCGAAATCCGCACAGAACTTAGCCAAAAACTACACCCTAGTCGACGGCAAGGCGGTGGTAGGGTCCAACTTAGAGATCACTTTAGTCAGCCCCAAAAGTCAGACACCGCCGAAAAATAGACAGCCTCAGAAGCGGTCGTCGAACGGCAAATTTATGTCGTCAAAAACTCCTACGCCCCCTAAAGACTTTTCCAAAGATTATTCTAGAAGCTTCCCGTCCCCGAGTGGCCAGAAAACGTCGCCTACCGTCAAAAAGGCCTCAAATAGTTCCACTCTTATCAATATACCGACATACCAAATATCTAAAGACGATATATCACCAACTAGCTCGACAGGTTCAAGAGACTCCCAACAAAACCTTCAAAACAACTTACTACAAAACGTTTTCAAAGGACAGCCTAATTTAGCTCAACTAATGGATCTACAAAAGGGGCAGTTAGGTCAAAATTTAGGTTCGATCGGTCAAAATTTGACTCAAATGATGGACATGCAAAAGTCGGTTCCAATGTCGCCGTTTGTGGATCCTATGTATATGTCGGCCTTGTATAGCAGTCTCGCTGGTCAGATGGACCAACGGCAGTTGGCTATGTATAGGGATCTCATGGCAAATCAGTTCAGGTACTCCAGCTTATTAGGAGGCGTCGCCACGCCCACTACTaagaattaa
- Protein Sequence
- MVNFSMGVSHRAQTIHALSPPARLLCSLGDEVLALNEKVVIRADDLLSWISDGVSWRCGLRAVWRGACAPPSKAAPAPPSEPLHHTQLDFSDVDKEKSTMEPDTNSPGVVVFSYPRYCRYRALLARLEGMQSAWLRDSLVAALGGYAAATNNTCILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRLHRSRSHSRSSRSSDSEATPPQQRPQQKISPRRLSLRNGSSDKQSEAEADDEETSPEDLEFLHQLKQHYIAQGVSPRNLSVIHGLKDLSLRSLYNAVSSLGGYEAVCRDKLWRKVHPSRPGKARGLYVRYLRPYESHERSNGRLKPNGKVDDNNIVTIHLPDSPKQESKDCKEEKPDVTSQVGHGGQPVASAEELNRQFLDSISSDVKNVKEDVKPLISVKPPQLLIDPDKQKQSVIKLFEENSGLVAELSAKYNVADDKVIEEVGVRKLSDGSCQLLGELARRLQPGNTDATFLKELAGQDLSNNALSSLSSLVNGANPDQRSRPLGRSSLRHVRVKPTRPPTANTTPVPRSDSNSNPSPPSSGSATSVPPVTNFGIHHPQPRQQPPDDDVIQVPYKPKTPEIIDLDEYPESPQSPKKKKLDILKERGLEVTAVNPAPPAAVWPTNPPLLLNPAVQHQIMTQASLFQMYNIIPQNYANGIQPPRVIQSTCLYGTGSPEKTVYGNPKDPFMPPPHVFQGTPIKPQRTVTSDKVDIVPTSRDILDLTCKNAVKPTVEIVKVPSVPSPSKSAQNLAKNYTLVDGKAVVGSNLEITLVSPKSQTPPKNRQPQKRSSNGKFMSSKTPTPPKDFSKDYSRSFPSPSGQKTSPTVKKASNSSTLINIPTYQISKDDISPTSSTGSRDSQQNLQNNLLQNVFKGQPNLAQLMDLQKGQLGQNLGSIGQNLTQMMDMQKSVPMSPFVDPMYMSALYSSLAGQMDQRQLAMYRDLMANQFRYSSLLGGVATPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01336611;
- 90% Identity
- iTF_00844102;
- 80% Identity
- -