Tnot017880.1
Basic Information
- Insect
- Tupiocoris notatus
- Gene Symbol
- nfxl1
- Assembly
- GCA_037159825.1
- Location
- JASJUZ010000571.1:2362286-2367870[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2.5 1.9e+04 -3.9 3.2 14 19 173 178 173 178 0.87 2 18 0.23 1.8e+03 -0.6 0.4 4 10 209 215 208 215 0.94 3 18 2.7e-08 0.00021 21.6 16.9 1 19 223 240 223 240 0.99 4 18 1.7e-07 0.0013 19.0 12.6 3 18 278 293 276 294 0.91 5 18 0.88 6.8e+03 -2.4 1.2 5 10 318 323 318 323 0.94 6 18 3.4e-10 2.6e-06 27.7 13.6 1 19 329 347 329 347 0.99 7 18 9.2e-08 0.00071 19.9 11.1 1 18 382 399 382 400 0.98 8 18 1.1 8.8e+03 -2.8 0.4 1 5 409 413 409 413 0.92 9 18 3.3e-05 0.25 11.8 19.1 1 18 434 451 434 452 0.97 10 18 4.3e-10 3.3e-06 27.4 13.6 1 18 461 478 461 479 0.97 11 18 0.96 7.5e+03 -2.5 2.6 5 10 507 512 497 512 0.48 12 18 0.00046 3.6 8.1 11.2 9 19 527 537 525 537 0.91 13 18 0.019 1.5e+02 2.9 5.3 1 12 546 556 546 556 0.96 14 18 1.3 1e+04 -3.0 5.8 14 18 585 589 585 590 0.89 15 18 2.1 1.7e+04 -3.6 1.8 9 15 607 616 606 621 0.55 16 18 0.015 1.1e+02 3.3 7.5 1 11 626 636 616 640 0.92 17 18 0.016 1.2e+02 3.2 17.4 1 19 664 681 664 681 0.93 18 18 6.5e-05 0.5 10.8 11.4 1 15 728 741 728 748 0.93
Sequence Information
- Coding Sequence
- ATGGCTCAGCAAAATGGCAACAACGCGTGGGCTCAGGGCCCTCCGGGCGGGAGggggaagaaaaagaaaggcCCGTACACTTCCAGTACAGCTAAAGGGACAATATCATCAATACCCGCGGAATCAGCAGCGgatagatttaaaaaagcgCAAGCCAAACTGCAAGATTCGGTGCAGAAACATTTGGAGCAAGAGTTCGAAGCTTCGTCTGAAGAGGAAGAATTGGAAACGACGAATATTTACGATTCCGTCATCAAAAACTATTCCCAACTCGGCGGAAGAGGCGAAGATCTCAGTAAGACGCAGAATTTTCTCGAGAACATATTCCGTTCGGACGTTGCCATTTGTCTCATTTGCATTGCTACCATCAAACGAGCTGATCAgATTTGGAGCTGCACCTCATGCTATGGTTTCTTCCATCTACTCTGTGTTCAGCGATGGGGCAAAGATAGCATTGCCCATCAGAAATTCAGAGAAGAAGATCATTATTCCGTTTTGAAGAAACAGTACTTCTGGCCATGTCCTAAGTGCAGGAAAAATTACACACCAGAAAGTGTTCCTCAGCGGTACGAATGTTTCTGCCGCCAAGTTTTAGATCCTCCTTACCAGCCTTGGCTTGTACCGCATTCTTGCGGCAATGTCTGTGGCAAAGATTTGATCCCGAGTTGCGGTCATACTTGTTTACTATTATGTCACCCTGGCCCTTGTCCTCCTTGTCCGAAAATGGTTCGAAGCAAATGCTACTGCACAAATGGGACTGAGAAAATGGTCCGTTGTTCGTACAAAGAATGGTCATGTGGTCAGAAATGTCGACAAGTTTTGGCCTGCAAGAAACATGCATGCCAATCTGTCTGCCATCCGGGTGACTGCCCTGTGTGTGAAAAGACCTCAATGATAACCTGCGACTGTGGCCTTGAGACACGGCTTTCTCCATGCGCTGAATTATCATGGAAGTGCTCTAAGgtgtGTTCCAAGGCATTTGACTGTGGTATCCACATGTGCCAACAAATCTGTCACAGTGGAGATTGTGGCCCATGTCCCCAATCTCTCCCTCGCACATGTCCTTGTGGTGCCGAACAGATGCTCCTTCCTTGCAGTCAGGATGTGTCTACTTGCAATGGAACCTGCGGCAAACTTCTTGACTGCGGTCTGCACATGTGCAACCAGAAATGCCACAAAGGCTCTTGCGGTGCTTGCATGGAATTCCTAGAAAAATCATGCCGATGCGGAGCTCATAAGAAAGAGATAGCCTGTATCAAGGAGTACCTTTGTGATACCAAGTGTAAAGGAATCCGCGATTGTGGCGTCCATCCCTGCAACAGAAAGTGCTGTGGAGGTAACTGTCCGCCTTGTGAAAAGATTTGTGGCAAGACGCTTCGCTGTGGACAGCACAAATGTAGTTCTGTATGTCACCGAGGTCCCTGCTATCCTTGTGAATTGACCAAACAGATCTCCTGCCGCTGCGGTTCCACAGTGATTACAGTACCTTGTGGTACTCATCGCAAGAAGAAGAATTTGAAATGCAACAAATTATGCCAAATTCTACCCGAATGTCACCACCCGAATAGAGAGCCTCACAAATGTCATCAAGGCCCCTGTCCACCATGTCGCCAGGTGTGCAAAAAGCCCAGGAAATGTGGTCATGCATGCTCTCTGAACTGTCACTCTTCTGTTCTTGTCAACTCTAAGCCAAATTACAAACCAGCGACGCCGTGGGAAGTGGTGACAGCCCCACTAGAGATAAAAGACCTTCCTTGCCCCCCATGTGAAGTTTTGGTCGGTGTCTGGTGTCCAGGTAGGCATGAGGAAATTATGCTACCTTGTCATCGAGCTGTGGCACAGCCCTGTGGGCGAAACTGTGGACGTGTGCTAGCGTGCACTAATCATACGTGCACACTTTCTTGCCACATGGTAACAGGAGCTCCGGATAATGAGaGAGCAGGTAACGAATGCATGGATTGCGCTGAAGAATGCGAGGCTAACAGGCTGTGTTCGCATCCCTGCCCTCAAATATGCCATCCTCCGCCATGCCCTGATTGTACAGTTACTTTGAAGCTTCGTTGCCACTGCGGTATCAACTTCACGTATGTCAAATGCTCAGAATGGACGGCGCCTGATCTGGATATTGAGGCTAGGAAAAGCCTTCAGTCATGTAGAAACCAGTGCCCTAAAACATACTCCTGCGGCCATCGGTGCACAAACAATTGCCACGACGGCGAATGCCTCGGCGGAGACATGTGTCGAAAACGCATCAAGCTCGCTTGCCCTTGCAAGAGAATCAAGAAAGATCTGATTTGCCATTTGGCTGGCAATGGAGCCCCTGTCTGCGACGATACTTGTAGAACTACCAAAGCTCAACTATCCGAGaaagaagaaaaagaaaaagagcaACAGCGACTTCTCGAGGAAAAACGGAACAaggaagaattggaaaaatacgagAAGAAACTGCAAGGTGGGAAAAGGCACCGAAGCAAAAAGAAACAGCCAAATGAAGAAGAAACGAGAAGCTTTATATCCACTCGGCTGCTTATCATAGCTGTCTTCGCATTTCTTATTTCAATCGGTGCATTCTTCATATATAAGTCGAAATGA
- Protein Sequence
- MAQQNGNNAWAQGPPGGRGKKKKGPYTSSTAKGTISSIPAESAADRFKKAQAKLQDSVQKHLEQEFEASSEEEELETTNIYDSVIKNYSQLGGRGEDLSKTQNFLENIFRSDVAICLICIATIKRADQIWSCTSCYGFFHLLCVQRWGKDSIAHQKFREEDHYSVLKKQYFWPCPKCRKNYTPESVPQRYECFCRQVLDPPYQPWLVPHSCGNVCGKDLIPSCGHTCLLLCHPGPCPPCPKMVRSKCYCTNGTEKMVRCSYKEWSCGQKCRQVLACKKHACQSVCHPGDCPVCEKTSMITCDCGLETRLSPCAELSWKCSKVCSKAFDCGIHMCQQICHSGDCGPCPQSLPRTCPCGAEQMLLPCSQDVSTCNGTCGKLLDCGLHMCNQKCHKGSCGACMEFLEKSCRCGAHKKEIACIKEYLCDTKCKGIRDCGVHPCNRKCCGGNCPPCEKICGKTLRCGQHKCSSVCHRGPCYPCELTKQISCRCGSTVITVPCGTHRKKKNLKCNKLCQILPECHHPNREPHKCHQGPCPPCRQVCKKPRKCGHACSLNCHSSVLVNSKPNYKPATPWEVVTAPLEIKDLPCPPCEVLVGVWCPGRHEEIMLPCHRAVAQPCGRNCGRVLACTNHTCTLSCHMVTGAPDNERAGNECMDCAEECEANRLCSHPCPQICHPPPCPDCTVTLKLRCHCGINFTYVKCSEWTAPDLDIEARKSLQSCRNQCPKTYSCGHRCTNNCHDGECLGGDMCRKRIKLACPCKRIKKDLICHLAGNGAPVCDDTCRTTKAQLSEKEEKEKEQQRLLEEKRNKEELEKYEKKLQGGKRHRSKKKQPNEEETRSFISTRLLIIAVFAFLISIGAFFIYKSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -