Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.56 1.6e+03 -0.9 0.0 19 27 82 89 76 95 0.75

2 6 0.078 2.3e+02 1.9 0.0 21 28 111 118 101 124 0.73

3 6 0.00029 0.84 9.6 0.0 20 30 166 176 159 180 0.82

4 6 0.028 82 3.3 0.0 11 27 185 201 184 206 0.83

5 6 0.0016 4.6 7.3 0.3 17 27 220 229 216 238 0.79

6 6 0.036 1.1e+02 2.9 0.0 19 27 249 257 240 264 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.56	1.6e+03	-0.9	0.0	19	27	82	89	76	95	0.75
2	6	0.078	2.3e+02	1.9	0.0	21	28	111	118	101	124	0.73
3	6	0.00029	0.84	9.6	0.0	20	30	166	176	159	180	0.82
4	6	0.028	82	3.3	0.0	11	27	185	201	184	206	0.83
5	6	0.0016	4.6	7.3	0.3	17	27	220	229	216	238	0.79
6	6	0.036	1.1e+02	2.9	0.0	19	27	249	257	240	264	0.81

Coding Sequence: ATGCATGAACTTTCGCCTGCTCGAGTTTGCCATCAGTTGAGGGCAATTACTGAGGCGAGCTATCAGCTGAATGACGGACGTCGAGCTAGATTGACTCAGCCTTTATCTAAAGCAGCTAAAAATCTCTCGGCTGATCATGTTTTGTATAAGAGAGAGGGATCGTTTGCTTGCGACGACTGTGAATACAAGGCGACGGCTAGACAAGATCTCATCAGACATCTGAGAATCCACACTGGTGAGCGGCCGTATATCTGCGATGAATGCGGCAAAGGTTTTGCTCGACAAGACTCTCTCACTGCTCACCGAAGAGCTCATACAGGTGAGCGACCATTCGTTTGCCGACAATGCGGTGTCGGCTTCTTTAGGAGCGGAGATCTTtcaaaacacaataaaatcCACTTAGCTGAATCACCTTATGTCTGCGATGTGTGCAGTAAAGGATTCTCCCACGCTGGTAACCTTCAGAAACACAAGAGGACTCATACAGGGGAAAGACCTCACGTGTGCAATGCTTGCGGCGAAGCGTTCACTATTCTCGCCAGTCTAAGAAACCACTGGAGAACTCACACAGGTGAAAAGCCCTACATATGCGACGAATGCGGAAAAGGCTTCGCCGTTCTTGGCGATCTTCAAAGACACGCACGAATACATAcagGCGAACGGCCTTACTTGTGCAACCAGTGCGGGCAATGTTTCACCCAAATCAACAGCCTTACCAGACACAAACGTATTCATTCCGGTGAGAAACCGTTTTTGTGCAAAGAATGTGGAAAAGGGTTTGGGAGCAGCGGCAATCTCTCGAGACATAAAAAAACGCATAGCGGAACAATTAAAGAACCAACAACGAATGTAAGTTTGTAA
Protein Sequence: MHELSPARVCHQLRAITEASYQLNDGRRARLTQPLSKAAKNLSADHVLYKREGSFACDDCEYKATARQDLIRHLRIHTGERPYICDECGKGFARQDSLTAHRRAHTGERPFVCRQCGVGFFRSGDLSKHNKIHLAESPYVCDVCSKGFSHAGNLQKHKRTHTGERPHVCNACGEAFTILASLRNHWRTHTGEKPYICDECGKGFAVLGDLQRHARIHTGERPYLCNQCGQCFTQINSLTRHKRIHSGEKPFLCKECGKGFGSSGNLSRHKKTHSGTIKEPTTNVSL

Sequence clustering based on sequence similarity using MMseqs2