Basic Information

Insect: Tupiocoris notatus
Gene Symbol: -
Assembly: GCA_037159825.1
Location: JASJUZ010000017.1:1489270-1493745[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 6.7 7e+02 1.4 0.1 9 20 7 18 5 20 0.86

2 16 0.00043 0.044 14.6 0.1 1 23 158 181 158 181 0.94

3 16 0.29 30 5.7 0.0 2 23 186 207 186 207 0.95

4 16 2.4 2.5e+02 2.8 0.8 3 21 549 567 547 571 0.87

5 16 0.99 1e+02 4.0 2.7 2 22 669 689 665 692 0.87

6 16 0.00011 0.011 16.5 0.5 1 23 717 739 717 739 0.98

7 16 0.62 65 4.6 0.3 3 23 748 769 747 769 0.91

8 16 0.0011 0.12 13.3 3.6 1 23 774 796 774 796 0.99

9 16 0.02 2.1 9.3 3.6 3 23 801 822 799 822 0.94

10 16 0.00043 0.045 14.6 0.1 3 23 827 847 826 847 0.98

11 16 0.0001 0.011 16.5 2.6 2 23 854 875 853 875 0.94

12 16 0.00042 0.044 14.6 0.5 1 23 881 903 881 903 0.97

13 16 0.00024 0.025 15.4 0.5 1 23 908 930 908 930 0.98

14 16 4.5e-05 0.0047 17.7 0.3 1 23 934 957 934 957 0.98

15 16 2.6e-06 0.00027 21.6 0.1 1 23 963 985 963 985 0.98

16 16 0.029 3 8.8 3.3 1 23 991 1014 991 1014 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	6.7	7e+02	1.4	0.1	9	20	7	18	5	20	0.86
2	16	0.00043	0.044	14.6	0.1	1	23	158	181	158	181	0.94
3	16	0.29	30	5.7	0.0	2	23	186	207	186	207	0.95
4	16	2.4	2.5e+02	2.8	0.8	3	21	549	567	547	571	0.87
5	16	0.99	1e+02	4.0	2.7	2	22	669	689	665	692	0.87
6	16	0.00011	0.011	16.5	0.5	1	23	717	739	717	739	0.98
7	16	0.62	65	4.6	0.3	3	23	748	769	747	769	0.91
8	16	0.0011	0.12	13.3	3.6	1	23	774	796	774	796	0.99
9	16	0.02	2.1	9.3	3.6	3	23	801	822	799	822	0.94
10	16	0.00043	0.045	14.6	0.1	3	23	827	847	826	847	0.98
11	16	0.0001	0.011	16.5	2.6	2	23	854	875	853	875	0.94
12	16	0.00042	0.044	14.6	0.5	1	23	881	903	881	903	0.97
13	16	0.00024	0.025	15.4	0.5	1	23	908	930	908	930	0.98
14	16	4.5e-05	0.0047	17.7	0.3	1	23	934	957	934	957	0.98
15	16	2.6e-06	0.00027	21.6	0.1	1	23	963	985	963	985	0.98
16	16	0.029	3	8.8	3.3	1	23	991	1014	991	1014	0.97

Sequence Information

Coding Sequence: ATGTTAAGTACCAAGTTATCAACGTCGAGGAAGAAGGATTTGAAGAAGCATGTTGCTAGCGACAGGAAGCAATATGCTTGTTTTCTCTGCAGCACCGAACATTCTGAAAGAGGGTTACCTCTTCTCTCGTGTCAGACTACGTTTTCACGAGTCTGCTTGGGCGAGAAGCTTCAAGAAATAATGGGCGATGAATTCATAGTACTCATCTCTTCCAAGGATGAAGTTTGTTGGGGATGCGCTAAATATATCAATTGGGTCGATAAATGTGAAAGAGAATTGGATACGGCTAGAGCTGCAATCCTCAAAATGGTGATTGCAAAGTATAAGAATACCGAAATAAATGTGACGAATTTGCGGTCAGAGTTGCTGGATAGTGCACAGAATCACCGGCCAAGCAATGAGGAAGATGTTTTTAGCAGTTCCAGATACTACAATGATGGCGCAAAAAgcaaaggggagaaaaaaaaggatttcAACTGCCCCGTTTGTTTCAAAGTATTTACGTCGCCGGCTGCCCTCGGAGTGCACAAAGCACGGCAGCACCCAACCCAACGTTCATGCGAATATTGTGGTCTCATATTGCCAACAGACGCTAAGTATAGAGCGCACGTTGCCAAGCACATTATTAAAATCGCTCCGATAGCGCAGAAGATGATGAACTGTGTTTCTTGCGGCTTTCAAACCCAAGATATGGAAGCATACTGTCGCCACGTCTGTAATGCGAAAATCATGAACGCCGCTTGTTTCTCATGCAGAAAGCGATACATCAGGAAATCGAGTGTTGGATCATCTGGGAAAAATTTGTGCGACGAATGCCTCATCaatgaaggaaaagaaaatgtgACGGAGGAAAATTTGGAAGACGTCTCCCTCCAGGATAATCAAATAATCGATCCATCAGTGACGCACCAAGGTCAGGCTTCAAACGAGAATGAAGTAATCAATGGATACAGTTCGAACGATGCTGAAGTGAATGGCCAGTTCGAGATTGAATCGAATGCGCTAAATACGGCCGAAGAGCCGAATCCGTTACTTGTTCCAAAACAAGAAATTATCGAACTTTCCGAACCAACTGCGGACAATGAACAGTCGACAGCTCCCGATGGAACAATTACCGAATCGATTTACCCCGATAGGCCTGAAGAGGAAGTGGACGAGACCTGCGTcaatgaaaaagaggaaaCGCAAGGTGAAACTATTACGGCAGACCTTCACAACGAAATGCCCGAATTTTTCCGACCTCCTCGCGAAAAGCATCTAGACTACTCTAGTATAAtcaatgatgaaaatgaattgaCAAACGAAATTAAAGCCGAAAGAGAAATCTCGTTGCAATCGCTCGAGGAATCgtcttttttgaaatgttccaaCTGCCAGGAAGAATTCGAAATACATCAGCTCGATACACATCCGTGTTTCGTTCGGGGTATCGCTATGGAATATTGCGAGGTTGAAAACAATCAGAACTCGGACTATCTTACTATCCCAATGTATGAAGATCAGGTGATCGGCGTTCCGGTGAGCGAAATAGAAGCAACGCATGCAAGAGCAAGCAGGGAATCGAATCGAAGGCGCATCCCGAAAATTCCCGCCCAAGAAAACGTCCATTTTCCTCAAATACAAGAACCGGAGACGAAAATGCATTGCAAAACGTGTTACGCCGAATTCAGAACAATAAACTTAATGAGACAACATTGGGACATGACCGGGCATTCTAGGGAAGTTTCAACGACCACTATTGAACTCAACAAGATAAAAGACAAGTACAAGAAAACCGAACAGACTTTCAAAGTTGTCAAGCAAAATTTCAGCATCAGAGCGAACGTAATTGGTCAGAACGATGAGGATATAAAAAGGAACGACGATGTCTACACCAACTGTATCGTGAAAATCAAAGATACCCCGTCAATCGAGGAGTACATGTTACGCCGCGATGGTAAGAAGTGCGAAAATTGCTGCGTCATATTTGGAGACGAAGAACTTCTTGCCGAGCACAAGTGTTTGACATGTGTTAGTTGCCAGGTCGAATTCATGAATCACGGGTTGCTGAAAAAACATTACCAATATACGGGCCATTCGACAAAAGCGTTTAAAAAAGACCAGACTTCGCCGGAGCAATCTGTGGCCGAACATGCCGTCGTTCATTCCTACGATTGCCCCAAGTGCAGCAAAACGTTTCCTGCGCGTCTAGCTTTGagcaaacatttgaaaactcattacaAAGGTACGAATCGGGGAGCTTGTCATTATTGTTTGTTTGAGTTTGACGATAAGTCCGTCATACAGCAACATGTGCTCGAAGTTCATGGTGCTTATCTGTACAAATGTGAGCATTGCGACAGAGCTTTTCTCACCAAGTCGGCGCGGAACAAGCACCAGCTGAAGCACGTGGTACATTTGTGCAAGAAATGCAACATCAAGTTTACCACTCAACGACTTTTGACTTTCCACATGGAAAAAGTGCATCGATCAAGAGCTTGCCGCATTTGCGGTAAATTCATTGCCGATGCTTACGCCCTTAGGCGCCATGAGAGACGCCACTTTTACGAGCAAGGGCTCAAATGCGATTTTTGCGAGAAAACATTCAGAAGCAAAAGCGCTCTTCGCGTTCACAATCATATTCACAGCGAAGAGATTTTATTCAGATGTAAAACGTGCAGCCTCGGCTTCAAATCGCCTCGGTCTCTTGAAACGCACGAAATAGTACATATAAAGAAGAGCTACTCGTGCCCCAAATGTGGAATAGTTTGCCCGTCAAGGAACATGTACTGGGTGCATTTGAAAATGCACGAATCTGCGTACAAATGTGGCGAATGTGGTCTCGTTTACAGAGATACTTCGCTGCTGGCGATTCATTACAAGAGGAAACACGTCCGCGCTCGCCCTTACCAGTGTCCCAGATGTCCGAGGGTATTTTCAGTCCCAGCGACTCTCAGAAGACATCTTACTGTCCACACTAGGTCTTATCCTTTCAAGTGCGGTCTCTGCAAGAAAGGCTTTCTAACCAAATATGCATACCATAAACATTTGGACACTATGCACGCTCTTCAGAACTCTAATCCTCGCCACATTCTCAACACGATTCCGTCGTTAACGCTCAATGCCACGGATGAGGATATTCTCCAAGCAGCCGACACTTTAATCGCAGACGACGTTATTATGTTCAATGACTATCAGAAAGACGTGATTGAGCAAGTGTCGAGTAGTGATATGATCACTGAGGAAGTCGTCGTCGAAACGACGGAGCTCTTTGATGAGATACTCCATTGA
Protein Sequence: MLSTKLSTSRKKDLKKHVASDRKQYACFLCSTEHSERGLPLLSCQTTFSRVCLGEKLQEIMGDEFIVLISSKDEVCWGCAKYINWVDKCERELDTARAAILKMVIAKYKNTEINVTNLRSELLDSAQNHRPSNEEDVFSSSRYYNDGAKSKGEKKKDFNCPVCFKVFTSPAALGVHKARQHPTQRSCEYCGLILPTDAKYRAHVAKHIIKIAPIAQKMMNCVSCGFQTQDMEAYCRHVCNAKIMNAACFSCRKRYIRKSSVGSSGKNLCDECLINEGKENVTEENLEDVSLQDNQIIDPSVTHQGQASNENEVINGYSSNDAEVNGQFEIESNALNTAEEPNPLLVPKQEIIELSEPTADNEQSTAPDGTITESIYPDRPEEEVDETCVNEKEETQGETITADLHNEMPEFFRPPREKHLDYSSIINDENELTNEIKAEREISLQSLEESSFLKCSNCQEEFEIHQLDTHPCFVRGIAMEYCEVENNQNSDYLTIPMYEDQVIGVPVSEIEATHARASRESNRRRIPKIPAQENVHFPQIQEPETKMHCKTCYAEFRTINLMRQHWDMTGHSREVSTTTIELNKIKDKYKKTEQTFKVVKQNFSIRANVIGQNDEDIKRNDDVYTNCIVKIKDTPSIEEYMLRRDGKKCENCCVIFGDEELLAEHKCLTCVSCQVEFMNHGLLKKHYQYTGHSTKAFKKDQTSPEQSVAEHAVVHSYDCPKCSKTFPARLALSKHLKTHYKGTNRGACHYCLFEFDDKSVIQQHVLEVHGAYLYKCEHCDRAFLTKSARNKHQLKHVVHLCKKCNIKFTTQRLLTFHMEKVHRSRACRICGKFIADAYALRRHERRHFYEQGLKCDFCEKTFRSKSALRVHNHIHSEEILFRCKTCSLGFKSPRSLETHEIVHIKKSYSCPKCGIVCPSRNMYWVHLKMHESAYKCGECGLVYRDTSLLAIHYKRKHVRARPYQCPRCPRVFSVPATLRRHLTVHTRSYPFKCGLCKKGFLTKYAYHKHLDTMHALQNSNPRHILNTIPSLTLNATDEDILQAADTLIADDVIMFNDYQKDVIEQVSSSDMITEEVVVETTELFDEILH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -