Tnot019290.1
Basic Information
- Insect
- Tupiocoris notatus
- Gene Symbol
- Hivep1
- Assembly
- GCA_037159825.1
- Location
- JASJUZ010000649.1:19590-27494[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 3.7e-05 0.0039 17.9 0.1 1 23 81 103 81 103 0.98 2 8 0.00025 0.026 15.4 0.9 1 23 109 133 109 133 0.89 3 8 8.5e-05 0.0089 16.8 0.3 1 20 300 319 300 321 0.95 4 8 1.1e-06 0.00011 22.8 2.4 1 23 787 809 787 809 0.99 5 8 4.1e-06 0.00043 20.9 2.8 1 23 815 839 815 839 0.92 6 8 1.2e-05 0.0013 19.5 0.4 2 23 1196 1217 1195 1217 0.96 7 8 0.00015 0.015 16.1 2.2 1 23 1223 1247 1223 1247 0.93 8 8 0.0053 0.56 11.1 3.4 1 23 1268 1292 1268 1292 0.92
Sequence Information
- Coding Sequence
- ATGGTTTTCCAAATCGAAACTGGGGGAGATGTCTGTTGTTTAGATAAACAAGTTCAAGAAAACGGACTGGATGGGTACAAAATGGTTCAAGAGAGCGAATCGACCAATAGATATCTCCACAAGAAGTTCAAGAAGGTGGCCACTTTGGAGGAAAGCGCTCCAAAAAAAGGCAAAGGCGTCCTCTACTCTATTCTCCCTGGCGAGCCTGAACAACCCAAGGCGACAAGTCCTGACGGCCGGTACGTCTGCCCTTACTGCAAGCTGAGCGTTTCCAAACCGTCGGTTCTCCAGAAGCACATCCGAGCTCACACCAATGAACGCCCTTACCCTTGTCTGCCTTGCGGCTTCGCCTTCAAGACAAAAAGCAACCTCTACAAGCACCGGCGATCAAGGGCTCACACGCTCAAAACTGACGGCCTCAGCTCTGAAGATGACGACGGCGGGTCACCTTCATCCGAGAAATCCAACAAACCGTACAAGCCGAAGTTCCATCTTGCCGAGACAAGCTTGTCTTCGGCTGCATCCACATGCTCCTCTCCTTTCAGTTCCAGTCCGAGCCCTGACCTTCTCAATGCTCATATTAACCACCTCATAACTGAAAACCAGGCCATGCTCGACTTGGACGGGCCGTCTTATCTGCGGAGAGAGTCTTCTCCGTTGAGGAATGGAGAAACCGTGCCTCGATCGGGTTTGAGCTCGTACTCGGTTCATCCGGAACCTGAGGACCTATCGTCAACGTCTTCCGAACCTCTGAATCTCACGGTGAAAGAACCAAGAAAACGAGGGATATCTGAAGCCAACAGTGATTGCTTTCCTTTGTCCTTACCTCCCAAGGATCCCCTCGTCCCCCGACACAGGGAGCTCCCTGATCTCACTAGGATTACTGAAGAAGTCCTCTATCCCTGTCCTAACTGTAAAGCTGTCTTCCGTACCTACGATAACCTTAAAACTCACTTGTTTTCCTGCAAACCCAAGTCTTCCCCTGGCCCGTTGCTTGGCAAAACCCCTCTCGTCGACACGTACGACGGGGATAGTGTTAAGAAGAGAAAACTAGACATTAACAAACTCAACAGTgccaaaaaatgttcgttaaaACTGTTCGGAGGCGCTGTCCAAGTTTTAGACAACGCTCCAGACAATTGCAGGAATCAACGGTTAGAAGAGAATAAAGAGATGGCCAGAAAAGACGCTCAAGTGCTTATGATAGCTAAGACCGGGCTCAATGTTGTTGGAGCGACGATCGTTCAGTCGGAGACTCCAGAATTGCAACCTTCCACTTACCCTGAGAAACTGGTGCTGCCAATCATATCTAACGTTTCACCGCCCTTGCTCAAAGTTCCTGGGATCAGCACGCCTGTACAGTTTCCATCCTTGAGGTTCCCTCCAGCGTTGAATCCATTGACGAGCATCACTGCTTTCAATCCGTTGACGCTTCCGTCGCTAAGTCCTGCTAAACAATCACCGCAGCCAATGTCGCCATCGTTCAACGGAGTCGTGGGTACGATCGTCCATGCCGGCAAAGCTATCCCCTTCGTTCCTGGAATGCCAGGGCCTCATACGCTGCTCGGATCGTCACCACCCCTAGTCGCCACTGCACCGATACACTTTCAGCAGGAAAAGAGCGTTATTCGCTCTCCTGCCCCACTACTTCTTGCAAAGCCTGAGACTCCAAAAGCGCCCGTGTCTCCAACAATACTCAAAGATGAACAGACTGAACCTGCAGCCGCTGTGAAAGAACTCGAAGAATCGAAAGAAGTTGTGAAAAGAACGAGTGAGGGGCAAGAGAGGAAATTCTTGCGCCCGAGTTCGCTGCCACTGAAGCCTGGAACTTACATGCCCAAGAAGCAACTGGTGGCTCCTTTTCATACAACATCACTGATCTCTCCAGAGACGCCAAGGCCAAGAAAGTCGTACGGCCAGCTGTACCTGAACGGCCACGCCTACACATACCTTGGACTGAAATGCTCCACGAGGATGTTCTTCTGCACTCTGAACAAGCCGCAGCCGATATATGTGCCATTGGCGCCCGACCAGTACAAAGTCTCCATGTATTCCAATTGGACGATATGTTCAGATTCAAGCCCCACACCACCAGGAATGGACTCTAAGAAGGCGATGTCTTACTACGATTCGAGAAATAGAAACGGAAGTTATACGTTGGCCAACAGAAACAAGCAAGATTTGGTGACCCATTCTTCATACAAATCTTCACCCCCCGACCTTGATAGAAGCCCCAACTCTGGAAATGGCAGTGTTAAATCTGAAGGCAACGACGGATCTGAAAAACTGCCGATTTGCGAAGGTGgatttgaatcgaatgaagaaTACACCTACGTCAGAGGACGAGGACGGGGGCGCTACGTGTGCAAAGAGTGCGGAATCAGATGCAAAAAGCCGTCAATGCTTAAGAAGCATATTCGAACTCATACTGATCTCAGGCCATACACTTGCAAATATTGCGCGTTcagcttCAAAACAAAAGGAAACCTGACAAAGCATATGAAGTCTAAGGCACATTACAAGCGATGCGTCGAGCTCGACATTAACCCGGTGCCGACGAGCATCGACGGTTGCTATTTGGACGATGAAAACAATAGTCAACAGTCGGGTTCAAATCCTGCAGCTGGCTTTGAAGATGACTCCGAAGAGACTGAAGAAGATGAGGACGAGGAGGACGATGAGTCCGACGAGGAAGCCGATGATGGTGACGAGTGTCGAATGGAGCGGGAGGCGGCGAAATCTCTGCTTTCGTTGTCGGAAGTTACCTTGGAAACGGCGCATCGGCAGTACATCAGTGCCGGGCTTGTCTCCTCGCAGAATTCAAAACCCCGTACCTACCCTTACACTCTTACCACACCTCAGaGCGAGCCGGTTTCTCTTGAAAAACAAGCTAAAGCCGACGCTTGGAGGTCGGACGTTCTCTCGCTCAACAAAGACTGCCAGGACTTGGCAATATCCGTGCGACTCAGCCCTCGAAGCGATGCGTCTGAATTGACACGGCCGATGGATCTCAGCAACAAGTCCCCAGGTCTTTACTCGCAAGCTTGCAAAACTCCTGTGATAACAGCGGTCAGCAGTCCAGCTCTCCTAAAATCGTCAATTTGCTCGACAGCTGAAAAACCGCCAGTCACCGAATATTCAGACGAAAGCGCTTTGCTCCACGCATATCTAACAGAAAGGGCTGTACGAGATCAGCAGATCAAAATACAGCAGCAGAATTGGAAACGGGACCAAGAACCTGTGACACCTCTGGAACGGGTATCAATCGTGGAACGAATATCGAACGTGGACCAATCTAAACTGTTCCAGTCTTCACAGGAAGAAGACGAGAAAATCGTTGAAGAGCCATCGTCGAAAGAGCATGTACTGGCGGCTAAAGCGCATTCTCCCCCTGCTCCTCCTGCTCTTTCGCCTTCAGTGCCTGCTGCATCACCGACGCCGGCAGTTTCTGCCGCTCAGCACAAACGTCCTGAATCGCCGCTTTCTCAACTTCTGCCGACCAGTCCCAATAATAAGAAGAAAGCTGAATTCAAAGAGCCAGCGTCTGCACTCAGTTATATCAGTTCGACCGAAGATGGCAAGAGCATGTGCAGCGTGTGTAACAAAGTGTTCAACAAGCCGAGCCAGCTCCGGCTCCACGTTAACATTCACTATTTCGAACGTCCTTTCCGCTGCGAATCCTGCGCGGTCTCTTTCAGGACGAAAGGCCATTTGCAGAAACATTTGCGGTCCCTTTCGCATCTGAACAAGATGAATATGAACTCGACTTTTGGAACTGCGACCACAAGCAATCCAAGGCCGTTCAAATGCGACGACTGCAAGATCGCTTTCCGCATCCATGGCCACCTAGCGAAACATTTCCGCAGTAAAATGCACATTATGAAGCTCGAATGTCTGGGAAAACTTCCGTTTGGGATGTACGCCGAGTTGGAACGCTCTGGAATCAATATGAGCGACATCGATACGACCGATTGTGAAAATTCCCTCGAGAGTTTACAGTTGTTAGCGCAGAAGCTGTCCCTAGACAAGCCTGGCACGCCTCGACCTGACCATTGGGAAGCCCTGGAGCATCGTGGCGGGCCTACAGTGGACATGTTCGGCGGTGGAAGCGCTTCGGAAGACGAATCTTCTTATTCCGCCGAAACTTTTGGTCGACCTTGTGATATGGAAACGAGAAACGAAACCGTTCGATGA
- Protein Sequence
- MVFQIETGGDVCCLDKQVQENGLDGYKMVQESESTNRYLHKKFKKVATLEESAPKKGKGVLYSILPGEPEQPKATSPDGRYVCPYCKLSVSKPSVLQKHIRAHTNERPYPCLPCGFAFKTKSNLYKHRRSRAHTLKTDGLSSEDDDGGSPSSEKSNKPYKPKFHLAETSLSSAASTCSSPFSSSPSPDLLNAHINHLITENQAMLDLDGPSYLRRESSPLRNGETVPRSGLSSYSVHPEPEDLSSTSSEPLNLTVKEPRKRGISEANSDCFPLSLPPKDPLVPRHRELPDLTRITEEVLYPCPNCKAVFRTYDNLKTHLFSCKPKSSPGPLLGKTPLVDTYDGDSVKKRKLDINKLNSAKKCSLKLFGGAVQVLDNAPDNCRNQRLEENKEMARKDAQVLMIAKTGLNVVGATIVQSETPELQPSTYPEKLVLPIISNVSPPLLKVPGISTPVQFPSLRFPPALNPLTSITAFNPLTLPSLSPAKQSPQPMSPSFNGVVGTIVHAGKAIPFVPGMPGPHTLLGSSPPLVATAPIHFQQEKSVIRSPAPLLLAKPETPKAPVSPTILKDEQTEPAAAVKELEESKEVVKRTSEGQERKFLRPSSLPLKPGTYMPKKQLVAPFHTTSLISPETPRPRKSYGQLYLNGHAYTYLGLKCSTRMFFCTLNKPQPIYVPLAPDQYKVSMYSNWTICSDSSPTPPGMDSKKAMSYYDSRNRNGSYTLANRNKQDLVTHSSYKSSPPDLDRSPNSGNGSVKSEGNDGSEKLPICEGGFESNEEYTYVRGRGRGRYVCKECGIRCKKPSMLKKHIRTHTDLRPYTCKYCAFSFKTKGNLTKHMKSKAHYKRCVELDINPVPTSIDGCYLDDENNSQQSGSNPAAGFEDDSEETEEDEDEEDDESDEEADDGDECRMEREAAKSLLSLSEVTLETAHRQYISAGLVSSQNSKPRTYPYTLTTPQSEPVSLEKQAKADAWRSDVLSLNKDCQDLAISVRLSPRSDASELTRPMDLSNKSPGLYSQACKTPVITAVSSPALLKSSICSTAEKPPVTEYSDESALLHAYLTERAVRDQQIKIQQQNWKRDQEPVTPLERVSIVERISNVDQSKLFQSSQEEDEKIVEEPSSKEHVLAAKAHSPPAPPALSPSVPAASPTPAVSAAQHKRPESPLSQLLPTSPNNKKKAEFKEPASALSYISSTEDGKSMCSVCNKVFNKPSQLRLHVNIHYFERPFRCESCAVSFRTKGHLQKHLRSLSHLNKMNMNSTFGTATTSNPRPFKCDDCKIAFRIHGHLAKHFRSKMHIMKLECLGKLPFGMYAELERSGINMSDIDTTDCENSLESLQLLAQKLSLDKPGTPRPDHWEALEHRGGPTVDMFGGGSASEDESSYSAETFGRPCDMETRNETVR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -