Tnot015896.1
Basic Information
- Insect
- Tupiocoris notatus
- Gene Symbol
- Zfx
- Assembly
- GCA_037159825.1
- Location
- JASJUZ010000470.1:30489-44198[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.0096 1 10.3 1.4 3 23 161 181 159 181 0.95 2 24 0.00025 0.026 15.4 1.0 1 23 187 209 187 209 0.94 3 24 2.5e-05 0.0026 18.5 0.3 2 23 215 236 214 236 0.96 4 24 0.0024 0.25 12.2 0.0 2 23 243 264 242 264 0.96 5 24 0.054 5.6 8.0 0.5 1 23 276 299 276 299 0.90 6 24 2.7e-07 2.9e-05 24.6 0.5 1 23 318 340 318 340 0.98 7 24 8.3e-08 8.7e-06 26.3 2.2 1 23 346 368 346 368 0.98 8 24 1.2e-05 0.0012 19.5 0.4 1 23 374 397 374 397 0.95 9 24 9.6 1e+03 0.9 0.4 2 23 410 432 410 432 0.92 10 24 5.6e-05 0.0058 17.4 2.9 2 23 508 529 508 529 0.98 11 24 0.51 53 4.9 0.1 2 23 563 585 562 585 0.93 12 24 1.4e-05 0.0015 19.2 4.9 1 23 705 727 705 727 0.99 13 24 5.8e-07 6.1e-05 23.6 1.8 1 23 733 755 733 755 0.99 14 24 5.2e-06 0.00054 20.6 1.0 1 23 761 783 761 783 0.94 15 24 0.00012 0.013 16.3 2.1 1 23 789 811 789 811 0.98 16 24 0.015 1.6 9.7 2.8 1 23 951 973 951 973 0.97 17 24 0.038 3.9 8.5 0.2 2 20 980 998 979 1000 0.89 18 24 0.014 1.4 9.8 0.2 2 20 1031 1049 1031 1050 0.94 19 24 0.13 13 6.8 0.2 2 23 1057 1079 1056 1079 0.93 20 24 6.3e-08 6.6e-06 26.6 1.3 2 23 1188 1209 1187 1209 0.98 21 24 0.00019 0.02 15.7 0.6 1 23 1215 1237 1215 1237 0.98 22 24 0.00012 0.012 16.3 0.3 1 23 1243 1265 1243 1265 0.98 23 24 0.0022 0.23 12.3 3.5 1 23 1271 1293 1271 1293 0.98 24 24 1.1 1.1e+02 3.9 0.0 5 23 1448 1466 1447 1466 0.94
Sequence Information
- Coding Sequence
- ATGAGTGTTATAACTCTTCCAGAGGAACAATGCACGTTCACAGCGAGCGTAATCAATACACAACTTTTGTTCTCGTTGCCGGAAAATTCGCGACATGGAGGTGAAGACGCTATTGTTCTTGACAATGGTGTCCAGTATATACCCGTCTACCTCCAAGAAGGTGCACCTACAGTCAGCTGTTTTTCCGTCAACAACGTCCAGCAACTTCCCCTCTTGGCCACTTCTCAGCCAATAGTGTTAACAAGCGATCAAATAGTTCCATTCGACGGGGAGAAACATGCGATCATTCAACCTGATCCTGAGCAGAATGTTTCGGATTGTGATAAGAACGATGCCGATAAGTGCGGCAAGGTTATTGTTGTCCATGATGAGCCTGCTGCCACTGCGTCTTTCATTCTTGAACGGGAAGACCTTGTCCAACAAGCTCAGCCCGAAAACGCCGACCAAGTTGATCCACCTGACAATACATGCCCCAAGATTTGCAGCGCGTGCGGATTGAAATTCGAGTCCAAGAAATTGTACAAAAGACATCTACAATTTCACCTGCATGATAAACCGTTCAAATGTCCTCATTGCTCTCAGTCGTTCAACCGCGAGTATAATCTTATCCCGCACTTGGCGCTCCACAATGAAAAAGAGCTTTCATGCACAGTGTGCAACAAGAGGTTCAACAGGTTTGCCAGTTTGAAAGCTCACATTGCAATCCACCAGTGCGACGACACTCTTCCATGCCCGGAATGCTTGGAAGAGTTCAGTAGCCAGAAACTTCTCGACTCCCACATACAAGAGCATCAGGCGGGCTTTGTTAAAAAACTGCTCAAAAAGCATAGTTGCCCAAAATGTAGCGAAAAATTTGGAACCTACGCTCTAATGAGGGAACACGTCAGTGACGTTCACAAgACGAAAATTCCGAAAAAATTGCCGAAGAAGCTCAGAAAATACAAGGGCGGCTATGTTTGCGAATTTTGCCAAAAACGCTTCGCCAAACCGAGCCAACTCGAGCGGCACATTCGGATTCACACAGGCGAAAAACCATTCAAGtGCGGCGATTGCGGAAAATGTTTCAGCCAAAGGGGAAGTCTTCAAATTCATATGCTCAAGCATACTGGAGAACGGCCTCACGCTTGTAAATTCTGTGACGCTGTATTTACACAAAAAGGAAACCTTAACGCTCACATAATACGGATACATCCCGACGAAAGAGCAACTGAATCGAGACGGAATCGGGTTTGTGAATTTTGCTACTCGACCTTAAAGAGCGAATTGGCCTATAGAAATCATATAATCAAATTTCACCCGACGTATTGTTTCATCTTGAATAAACCGTCGACGAGCAACGACGTTTCAGACGAAGAAGAAGTGTTCTTAGAAGAAGACGGCGTCGTTGATGATTCGTCTAATAAAGAAAACGAAagcaaaacaaaattaatttctgcgCCGGTTGAGCTGGCCTCGGACGACACTCGAGCCAATGAAAAGCGAGAAACCACATGGGGGCGCTCTTCCTCTGGCATCATCAACCGATGCGAATATTGTTTCAAAGTTTTCCGCAAACGAAATTACCTAGTGAAACATCTTAGGAGACATGCCCGAGGAAATTTGCCATATAAGCGTTCGTGCGAACTCCAGACTACTAGAAGTTCTTCAAATCGCACACAAGCAGCTCGATCTCGGAATTTGGAACTCTCTTGCAACTTGTGCCCCAGCAAGTTCAATGGCGACGAGGAATTAGAGACTCATGGAAGGGAAAATCATGCTTCAAATGGGACTCAGTGTGAAAACGCGATAGTGAATGAGAAGCCTCAACAGGACTTGATTGCATCAGAGGTACCTTCTTACACTGAAGCTAATTTGCTGCCGGAAGCTGTCCCTGAAGCTATTCCTCAACCAACCACCAGCTCGACTAGTTTCCTGGATGATTCATCTTACAAAAAAGCTACAGTTCTCATCTCCAACGATGGTACAGTGGAACTCATCTTGGACGAGAGCTCAAAATATTCGGTCGCCGATGATGCGAAAGCGGACTCTCTAAATCTAGAACAGTCCGAAGTTTTAGTTCAAGAAGTGATAGAAGAACCCTCGCGCGAAAGTTTGGACATTCTATTGCGGAAGTTTAAATGCGACCATTGCAATCTTGCGTTCAAACAGAAAAGCCACTGGAAGGAACATTTAAGAATACACACGGGAGAAAAGCCGTTCACGTGCCATATCTGCAATAGGAGCTTTGCTTCAAAAAGCGGCCTGTCGGTCCATGTGCGGACTCATAGTGACGTGCCCGCGTTCAGTTGTACAGACTGCGGTCAGGCATTTTCAACACAGCGTAGCCTTAAGCGACACTCGGAACTGCACGTCCCCGGGTTCAACTATTCTTGTTCCGTTTGTTCGAAACCGTACAAAACCAAATTCTCCTGGCAGAAACATTTGTCCACGCATTTGAAAACGACGCATGTGACCGAAAAAAGAAACGATCCTGGTCAGAATTTTCGTGGGAAAGATTCACCTGAAACGTGTCGGGCCGATGACAAAACTAATTCGGACGACATCAAAAAGACAGATGTCACTTACCAAGGCGACTGGAGCTATATTCTTCAATCGGCTCAGCAAGGACAGCAGTTAAATCTTCTTGCCAACCCGGCGAATCACAAGTCGACTTCGACGATTCCGAACGATCAAAGTGCACCAAATGAAGTTCGACTGAACGCTTTGAGAAGTACGAACCAGTTGTTCAACACTTTGAACGACCAAGCCTTCGATGGTTGCGTCTTCCTTCAAAGCAGCGAAGACCTTCATGCTCAGAGCGCTTGGCTTTCGGAGCAAGTAGCGCTTCCAGCTCAGCCGCAAGCAAACACTCACCGCTGCGAGCTCTGCAATGTCTGCTTTGACTCTTTAGTCGACCTGTCCATCCACAAAACGACGCATATTCAGGGCAAGCTCTCAACGTGCTCCAATTGCGACAAACCTTTTAGCTCCACGGAAGAAAATGAGGAGCACGCTAAAAACTGCTTCCCTCGAGCCGCCAATATGCGCGATGACGACAGCAATACATCAGAACCGAGTTTACCTGTTGGTTATTCTTCGTCAAGACTTCGCAAGTGCAAAGAATGTGAAATCCATTTCATAACAGCTAGCGACCTATCGCTCCACGCCAACTGCGCGCACGGAGCGAGCGTGTGCAAAATTTGCGGCGAATGGTTCGACTTCGCTCACTCGCTTGAAattcACGAACAGCTATACCATAGGGACGAGAGTTCAAAGTGTGCCACTAAATTAGATGCACCAATAAAACGCCCCGGTGACGAAAAGTCTATTGTCTTGGACGTTCAAGAAAACAGCGATGATACTCGCAATAGAAAATCCGATCTGTCGGAAGAGCGGCAAGAGTTGAAGCGGAAAAGAGGGATCGTTCGGACTCTGACCGAAGCCGAACAATTAGCAATTGCTAGAGAAAGTCCCAATTCTCTTTCTGAACGTGTACTGCAACAGTCGATCCTGGGGCACATAAGaactaaaattgaaaagAGCGGCGAGAAACGGGTTGCCGAAACTGTGGAACATGCCAACCAGTGTAAGTACTGTCCGAAAAGTTTCCGCAAACCGTCCGACTTGGTTCGCCACCTTCGCACGCATACAGGCGAACGCCCTTATACCTGCCCAGCTTGCAAGAAATCATTTTCGATCAAATCCACGGCCAAGAATCACATACAGATACATTTGAGAGAGCACGGCTTCAAATGTCATATCTGCGGTAATGAGTTCGCTGCCATCGGAAGCCTCAAAGTTCACATGAGGTTGCATACagGTTCAAAGCCATTCACTTGCGACTTCTGCCCTGCCAAGTTTCGCACTTCTGGGCACAAAAAATCCCACATGTCGTCGCACGCGAAGAAGGATAAACTTGAGAAAGAAAGGGAATCTTTGATCCAAGCTGAGGAGACGGCTGTTTTCCTGAAGAAAACATCGATTTCGGCCAACCAACATGCGGAAATCAAGTATAGGAACGAGCAGAAGCAAGATTCGCAGCCAATACAGTCGCAGTATTTATTCTCATTGGACGGGCAGCTTACCTTCAGCGACCGCGGTTTGGTCGAAGACGCCCCTAGCGGACAGCAATTCTTCCTGAAAGAAGTAAAACAGCCGCACCCTGGTGACACTGCTGCGCATTTCATCGTAACAATGGGCGACGATATTAATTACCAGGAAAACATCCAAGAACTTTTGGAATCAGTGCCGACATTGGACGATCCAGACGGAAGGTTGCAAGAGCTGGATTTGGATCTCGAGGCGCCCTCCAAAGTTCAGGTGATTTCCCACATTTTGGCCCCATTATTCGATTATTTCCTTGTGTGCAAGCAAAATTTCGCCGATAAAGGAGCCCTGGACGTGCACGAGCTGGTGCACGAATTCGAATCTGACGAATCGTTGAAACCTAGCGACGAATCCGACATCAAACAGATTCCCTCAACGTCGCTTGACCTTGCTTCAGTGGTTCATGAATTCTTCTCGTTCCCGACGCTGTAA
- Protein Sequence
- MSVITLPEEQCTFTASVINTQLLFSLPENSRHGGEDAIVLDNGVQYIPVYLQEGAPTVSCFSVNNVQQLPLLATSQPIVLTSDQIVPFDGEKHAIIQPDPEQNVSDCDKNDADKCGKVIVVHDEPAATASFILEREDLVQQAQPENADQVDPPDNTCPKICSACGLKFESKKLYKRHLQFHLHDKPFKCPHCSQSFNREYNLIPHLALHNEKELSCTVCNKRFNRFASLKAHIAIHQCDDTLPCPECLEEFSSQKLLDSHIQEHQAGFVKKLLKKHSCPKCSEKFGTYALMREHVSDVHKTKIPKKLPKKLRKYKGGYVCEFCQKRFAKPSQLERHIRIHTGEKPFKCGDCGKCFSQRGSLQIHMLKHTGERPHACKFCDAVFTQKGNLNAHIIRIHPDERATESRRNRVCEFCYSTLKSELAYRNHIIKFHPTYCFILNKPSTSNDVSDEEEVFLEEDGVVDDSSNKENESKTKLISAPVELASDDTRANEKRETTWGRSSSGIINRCEYCFKVFRKRNYLVKHLRRHARGNLPYKRSCELQTTRSSSNRTQAARSRNLELSCNLCPSKFNGDEELETHGRENHASNGTQCENAIVNEKPQQDLIASEVPSYTEANLLPEAVPEAIPQPTTSSTSFLDDSSYKKATVLISNDGTVELILDESSKYSVADDAKADSLNLEQSEVLVQEVIEEPSRESLDILLRKFKCDHCNLAFKQKSHWKEHLRIHTGEKPFTCHICNRSFASKSGLSVHVRTHSDVPAFSCTDCGQAFSTQRSLKRHSELHVPGFNYSCSVCSKPYKTKFSWQKHLSTHLKTTHVTEKRNDPGQNFRGKDSPETCRADDKTNSDDIKKTDVTYQGDWSYILQSAQQGQQLNLLANPANHKSTSTIPNDQSAPNEVRLNALRSTNQLFNTLNDQAFDGCVFLQSSEDLHAQSAWLSEQVALPAQPQANTHRCELCNVCFDSLVDLSIHKTTHIQGKLSTCSNCDKPFSSTEENEEHAKNCFPRAANMRDDDSNTSEPSLPVGYSSSRLRKCKECEIHFITASDLSLHANCAHGASVCKICGEWFDFAHSLEIHEQLYHRDESSKCATKLDAPIKRPGDEKSIVLDVQENSDDTRNRKSDLSEERQELKRKRGIVRTLTEAEQLAIARESPNSLSERVLQQSILGHIRTKIEKSGEKRVAETVEHANQCKYCPKSFRKPSDLVRHLRTHTGERPYTCPACKKSFSIKSTAKNHIQIHLREHGFKCHICGNEFAAIGSLKVHMRLHTGSKPFTCDFCPAKFRTSGHKKSHMSSHAKKDKLEKERESLIQAEETAVFLKKTSISANQHAEIKYRNEQKQDSQPIQSQYLFSLDGQLTFSDRGLVEDAPSGQQFFLKEVKQPHPGDTAAHFIVTMGDDINYQENIQELLESVPTLDDPDGRLQELDLDLEAPSKVQVISHILAPLFDYFLVCKQNFADKGALDVHELVHEFESDESLKPSDESDIKQIPSTSLDLASVVHEFFSFPTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -