Basic Information

Gene Symbol
Arid4b
Assembly
GCA_037159825.1
Location
JASJUZ010000182.1:1056944-1081461[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.4e-27 9.7e-24 84.0 0.1 2 89 400 484 399 484 0.94

Sequence Information

Coding Sequence
ATGCAATCTTTGTTTCAGCTGTCGTCAaaccaaattgaaaaactggaaGAAGCCAAATTGATGGCCAAATACCCTATGGCCGGAGGGGGACATGGTCATTCCGCCTTCCTGCAGAAGAAACTCAATAAGGGTcaGAAATATTTCGATTCGGGGGATTATCAGATGGCAAAACAGACTTCGGCCGCTGGACCTAACAAGAAGCTGCTTCAGTCAACGTTCAATACTGGTTTTGTTGCTACTGTAGAAAGAGTCTACTTGCATATTCTTCTGGTCTCCCGTTGGCCTAAACCTATTGATCTGTTGTTTCAGGCTGATGAACCTGCATCCTTACCTGTTGGTACTGGAGTTAGTGCAAAGTACAAAGGGGCGTTCTGTGAAGCTAAAATCCGAAAAGTAGTTCGGAGTGTCAAATGCAAAGTATTGTTCAAGAATGCGCTTGGAAGTTACACACTCAGTGATGATCAAATCCGTGGCACCTTGAGAaCTGGAGCGTCAGTTGAAGTTCGCCATCcagaaaagaaagaatttttcgaagcaacaattacaaaaattcaagATTGTAGTCAATACACTGTTGTGTTCGATGATGGAGATATAACTACTCTGCGCCGAACGGCTCTCTGCTTGAAAAGCGGTAAACATTTTGCTGAAAGCGAAACACTGGATCAACTTCCTCTCACACACCCAGAACATTTCAGCACACCGGTGATTGGTGGCCGGCGTGGAAGAAGAACTCGAATTGGAACgagtGCTGCAAGCAGCGATGATGACAACTACCAACAATCCAGtgacttttcaaatttcaaagaaaCTGATATCGGAAGAGTTGTATGCGTTGAAGGTGGGGAAAAGCGCAAAAATCGTGACAACTGGTTCCCTGCCTTGATAGTTGCTCCTACTGCTCAAGAAAGCGTCCCGATCCGAGTTCGTGATGAGTACTTAGTTCGATCCTTCAAAGATGGCCGATACTACACAGTTCCTAAAAAAGAAATCATGGAATTCACTCGAGAAATGGGAGCCAAAGTTGAGACGAATTCACTCAAAGCAGCCGTAGAGAAAGCGCTGCAGTTTATAGATCGTGATGAACTTCCACTCCATTGGGACAGAGATCTCTTGTTGTATGGAGTAACTGAGCCTGGGTCGGATAGTGAGCTTGGAGACAATCACGATAGCTCGGATGATGATGAACCAGAGAAAAAGGATCACTTTGTTGCCCAACTCTACAAATTCATGGATGAAAATGGAACACCCATCAATGAGGAGCCAGTCATTGGAAGCAAAGATGTGGACCTGTTCCGCCTTTACAAGGTGGTGCATAATTTGGGTGGGTTCAACCGAGTGACCAACCAAAACAACTGGAAAAGCGTTGCTGTAAAACTCAGCTTTGGTTACAACCCAGTTGTAATTAATATGGTCAAGCAAAGCTACAGGAAGTATCTGCTAAGTTTTGAGGAATGGCCAAAACGACCTGGCTGTGCAATGCAAATACAACCTCGACTAAGCCGTAGTCGAAGCCGAGTTGGTAGAGGCAGCACACCCAAAGATCGCTATTCACCGAAACCTGTCCTCAAATCTGAAAAATCGGAAGGAGGTAGCGGAAAAGTGGGAGCCGGTGGATTGACTCCAGTAAGTTTTGCAACCGTCAATGTTTCCCAAACATCCGCTTCCAGCTATCCAGAGAAATTGATTGgaaaggaggaggaggaggaggaggaggaagaagatgaagatgaggatgaagatgaagatgaTGAAAGCAGTGCACCTCCTAACCCTAGAGATTTGTGTAAGCAGGTTGTCTCCAGCTTGGTCAAAGAGTCTGTAACATCTAACCATTCCCCAAAACCTTCACCGTCCACGCACTCGCCAAAACCCTTGCCCTCCACTAATTCGCCAAAACCTTCGCCATCCACTCACTCGCCGAAACCGGGTACGTCCACCCCCTCACCAAAACCAATTTCTTCATCTGGGCCAAAAGAAAAGCCTACTGTTAAACGAAACACAGCTCCGACAACACCTGAGAAACCAACACCAGCAAAGGTTCCTAAGGGTTTGGGAGAGAGCTCTTGTAGTTCGGATGTCAAGCCAGCTGTAATAAAAGAGATCAAACTTGAACCAGGGATGGCCAAAGTGCGCAATCCTAAATTCAAGGCTCTTACATCTGAATCTCCTTCTGACTCATCTGTCACGGTCATCAAGAAAGAAATCAAAGAGGAGCCGATGGAAGAAGGCAATAATATCGAGGATACTCCTTCAATCAAAGAAAAGAAGCGTCGTTTGGCTGTGAGGACTCCTAAGAAGGAAATCCCATTGGTTAAAGGTGGGAAAGTCGATTGCTTAGCCAATACCAGGCAGAAACGAGTCATCAAAGAAAAGGCTAAAAATATTGCTGCTTCAATCAAAGCTAGAACCAAATCATCTGCCTCGAGCATAGAAGGGATTGAAAAAATGTCGGTTTCGAAAATGAAGATCAAGGAAGAGGTCACTCCGAATAGCAAAAATAACAAGAAGGAGGAACAGATCAGTAGTTGTCCATCGACTGAAGAAAAGAAACGAGGACGCAAAAGAAAAGccaatttggaaaatgttgaCGAaccACCTGGCAGTTTAGCGCCCGCCCCATTACCAACAAACAAGAATATTTCGTTGGGTGATAAGTTAAAAGTATATTACGGGCCAACCAAGGAAGCTAAAATTACTTCTTATGAAGCCAAGGTGCTGAGCACTAAAGAGCAGAATGgcgaaattttctatttcgtcCATTATACAGGTTGGAACACACGCTATGATGAGTGGATCGGAGCTGAGCGAATCGCTGATAACCTATCGTGGGTATCGAATAAATTGACCAAGAAACAGAGCCAGGTTCTCAACCCTAAATTCCGGAAACGGCAGGAAAAAGATAAAgataagaaaactaaaaatgacCCCAAGACAAAGGAGGGTGGTAACGTCACTCATCCCAACAGCAGCTCAACGTCCTCCTTTGCATCAAAAGACCAAACACAACAGCACGGCACAACTATCAGGCAAGGGTCTGTTGGCAGGAGCACGACTCCTTCGTCAATTGCATCTTCTTCGAGTAGGAGCAAAGGAGCGACTGCGAAGAAACGTCCTCAAAGAAAAGCGAAGCAAAATAAGCAGAGTATCAAAACGGAAGACTTCTATAGTGACAATGGCTCAGAAACTGGCGACTCCAAAAACACGTTGCCAAACATGGGTTTTGACAACTCTCAATCTGAAACTTCTTCTCCTGCTGATTTGAAACCAAATGAAAGCGTCAGCATGCTTGCTGCTTCAGAtataaaacaggaaaaaatggaCGAAGACTATGAAGAGGAAGCCGCTGCAAATGAAGAGAACTATAATGAAAATGATGATGCCGAtgaagaggaggaggaggaggaagaagaagacgaTGAAGAGGAAGATGAGGAGGAAGAAAACCCTCCATTGTTCAATGAAAACGTAGCAGAAGTTGTAAAGATTAAAACTGAAGTGGAAGAGATAGATGCAAGTGAGTACTACTACTACCACCGCAGTGACGAGGACGAGGAAGACGAAAATATTCGGGCCGGAATTAGTCAGATTGTCCAAGATTCGGTAATGAAGCATGAACTTGAGGACAGCCAAGGGTCTCCACTTCTTGGCTTTGATACCCCATCTAGTGAAGATGTGGCTGCCGATGATTCATCCAAGTCAACTACCAACGTCAGTGAAAACGTTCCTACTGAAAAGGTTCGAAAGTATCGTAGCCGTCAtttgggggttagaaatttcacAAACCAAACGGATACTGCAAGTTCTCAAGAGAAAGTCCAAAAATCCGATAGTATTGAAACGTCTTCTGAAAACCAACCATTGTCTGCTGCTCTAGCTGTCAAGCAAGAATCATCCTGTATCTTGGTCACTAATGATGTTTCTTCCGCAGTTGAAGAGCACGAAAACAAGAAGAGTCCAACGAACGAACCTGGAGAAACTGAAGATGTTTATGAGTTCAAGGAGCCTGAACCTTTCGAATTCGAGAGCCGTAAACTATCTGACGACAAggtgaaaacaaataaaagagGTTCCTCCGCACAACAATCTCCATCTTCCCACTCGTCCGGGGTTCAAAAGTCACCGACATCTTATGCAGCTTCTTCGCCATCTGAAGAAAATCAATGCTCGCCATCATCAGGCAGCAGAAGTGGTAAACTGGTCCAGCTGCAGCAGGAAGTGACATCGCCAAATAAGACTCCTCCGATCCTTCAGGCACCTTCACCTGATGTTATGAAAGATGACCATTCTCCAGGGAGTACACCTACCATACAAACATGTGAAGAAGCGTTCGACAAAATTTGTGCTTCTCCGCTGAGGGCAGCCACTTCAGAGTCACGTCATATTGAGCTTCTTGACCGAATGGACAACTATGATGAAGATGATGCATGTGATGATGATAGTGAAGATCGGTTAGTAATTTCTGAGAGGGATAGCGACAACGGGAGTAACACAAGTTTGGACGCCAAAAACAAGGATTCAAGCACTCTTCTTCCTCCAACACTGACGCCTGCTGTCACAAGAAGGGAGATGGACGCTGATGAGAGCGAAAACGCTCTTGAGAAGAGCAAAACTAGAGAGAGGAAAGAGAAGCGAGTGCCAGCTATCTCGCCAGTAAAACAGGAAGTACAAGAAGATGATGAAAACGAACAAGATGAAGATGAGAATGTCGAAGAAGCTGTTGGCGAggagaatttattgaaaatgatcaGCGATGAAAACATGGAGAGGGAAGAGGATGTTGAGGATGATGACAACGAAGTAGAGGAAGTGGccaaaaattatgtaaaagcTGATGCTAGTGAAGGTTCGTCGATGGAGGATGAAGAAATTGTAGCAGCGCCACCATCTTTAGCTGTTTGTGGTCTTTTAgacgaagaagaaataaaagagGATGTTACCTACTCTTTGGCTGAAGATGTCGTCGGGTATGATGCTGAAGATGGTGAACAAGAGGAAGAACAAGAGAACGACGATGAAGACGAAGAAGAAGAGGTCCTTGTAAAAAGTGAAGAAGATGAACCTCCTTCAATGAAATCGTTTGACGCATTGGCGAGTGACTCCAATGATgagACGTCATTTAAAGTGAGCAGTGCCATTGAACCAGTAGCAGCAGCGGCAGCAGCTGTAGCTGCAGCAGTAGCTGCTGCTGATGAGGATGAGGAGgtggaagaggaagaagaagagcTAGACCATCGTAGCCTAGACGAGAATAAGCCAAAGGAAGAGTTGGGACCAGTTGATGAAAAGGCAAACTCCGGCGAGGATGAAAACAACATTGAGTCCCTCATTTGTGAGGAAACCATCCCTGGAAGCCCTCCACCCCCTTCTGACGTCTCAGCCACAGTGGAATCTTCAAAAGCTAACTGTGACATTGATGctcattcaaatgaaaaactggATGAGCAGCATAGTTCTGATGAGGATGAGGGAGAGGAGCATGCGAAGGAAGAAATGACTGCTACTCAAAAGACGGCAGACTCTGCTGAAGACGAGAATAACATCGAATCTCTCATGTGCGAGGAGACCATCCCAGGAAGCCCACCATCTCAAAACGATTTGCTTCAACTGGATGAAAAAACTTTGACTGACACGGACCAAGAAATCAAATTGGAACCAAGTGGCGCGTCTTCAAATTGCTCCGAAGTTCTTATCAGCTGCAAACAAGAAAATGTCCTCAACGATGGAGCTCTAGACTCATCACCACTTATTTCAAAACTCAATGACACATCCTCGCCTTCGTCGCATCAACAAATAGAGGTTGACGTTTCATTGATCAAACAGGAAATAAAACAGGAACAAGATAATGACAATGACAAGTCCAACGCTACACCATCAACGTCTTTGAAAAAGGATGGAAATAAAATCCCCGCATCTTCGGAGGGGCGGGCGAAAAAACCTGAAGCAAGGGCACCAGCAAGAAGAGGCCGAAGGGCGAAAAAGAAATGTGAAGACAATCCAAGAAGAAAATACTCAAGACAAGCTAAACATCATGGTAGTGAAAGTGATGATGGCTATGATGGAGGAAATGCTTCTAACCGGCCCGATCCTGTGAAGAACTATGTACCGCTTGGGCGCAATTTCCTGATACCGCAagAACGGCTTGCTCCATTGGGATCGCAGCAGAGGATCAACCTGTTGATGCAGGCAGTGCAGGATCTGCGTAATAATTATGCAGAACTGAAAACAGAACTAGCAGCGTTGGACAAACGGCGAAAGCGCATTCGCCGCCGTGAACGAGAACAGGCTGCTCGATTGCACAGCACAAGAAACCATTAA
Protein Sequence
MQSLFQLSSNQIEKLEEAKLMAKYPMAGGGHGHSAFLQKKLNKGQKYFDSGDYQMAKQTSAAGPNKKLLQSTFNTGFVATVERVYLHILLVSRWPKPIDLLFQADEPASLPVGTGVSAKYKGAFCEAKIRKVVRSVKCKVLFKNALGSYTLSDDQIRGTLRTGASVEVRHPEKKEFFEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGKHFAESETLDQLPLTHPEHFSTPVIGGRRGRRTRIGTSAASSDDDNYQQSSDFSNFKETDIGRVVCVEGGEKRKNRDNWFPALIVAPTAQESVPIRVRDEYLVRSFKDGRYYTVPKKEIMEFTREMGAKVETNSLKAAVEKALQFIDRDELPLHWDRDLLLYGVTEPGSDSELGDNHDSSDDDEPEKKDHFVAQLYKFMDENGTPINEEPVIGSKDVDLFRLYKVVHNLGGFNRVTNQNNWKSVAVKLSFGYNPVVINMVKQSYRKYLLSFEEWPKRPGCAMQIQPRLSRSRSRVGRGSTPKDRYSPKPVLKSEKSEGGSGKVGAGGLTPVSFATVNVSQTSASSYPEKLIGKEEEEEEEEEDEDEDEDEDDESSAPPNPRDLCKQVVSSLVKESVTSNHSPKPSPSTHSPKPLPSTNSPKPSPSTHSPKPGTSTPSPKPISSSGPKEKPTVKRNTAPTTPEKPTPAKVPKGLGESSCSSDVKPAVIKEIKLEPGMAKVRNPKFKALTSESPSDSSVTVIKKEIKEEPMEEGNNIEDTPSIKEKKRRLAVRTPKKEIPLVKGGKVDCLANTRQKRVIKEKAKNIAASIKARTKSSASSIEGIEKMSVSKMKIKEEVTPNSKNNKKEEQISSCPSTEEKKRGRKRKANLENVDEPPGSLAPAPLPTNKNISLGDKLKVYYGPTKEAKITSYEAKVLSTKEQNGEIFYFVHYTGWNTRYDEWIGAERIADNLSWVSNKLTKKQSQVLNPKFRKRQEKDKDKKTKNDPKTKEGGNVTHPNSSSTSSFASKDQTQQHGTTIRQGSVGRSTTPSSIASSSSRSKGATAKKRPQRKAKQNKQSIKTEDFYSDNGSETGDSKNTLPNMGFDNSQSETSSPADLKPNESVSMLAASDIKQEKMDEDYEEEAAANEENYNENDDADEEEEEEEEEDDEEEDEEEENPPLFNENVAEVVKIKTEVEEIDASEYYYYHRSDEDEEDENIRAGISQIVQDSVMKHELEDSQGSPLLGFDTPSSEDVAADDSSKSTTNVSENVPTEKVRKYRSRHLGVRNFTNQTDTASSQEKVQKSDSIETSSENQPLSAALAVKQESSCILVTNDVSSAVEEHENKKSPTNEPGETEDVYEFKEPEPFEFESRKLSDDKVKTNKRGSSAQQSPSSHSSGVQKSPTSYAASSPSEENQCSPSSGSRSGKLVQLQQEVTSPNKTPPILQAPSPDVMKDDHSPGSTPTIQTCEEAFDKICASPLRAATSESRHIELLDRMDNYDEDDACDDDSEDRLVISERDSDNGSNTSLDAKNKDSSTLLPPTLTPAVTRREMDADESENALEKSKTRERKEKRVPAISPVKQEVQEDDENEQDEDENVEEAVGEENLLKMISDENMEREEDVEDDDNEVEEVAKNYVKADASEGSSMEDEEIVAAPPSLAVCGLLDEEEIKEDVTYSLAEDVVGYDAEDGEQEEEQENDDEDEEEEVLVKSEEDEPPSMKSFDALASDSNDETSFKVSSAIEPVAAAAAAVAAAVAAADEDEEVEEEEEELDHRSLDENKPKEELGPVDEKANSGEDENNIESLICEETIPGSPPPPSDVSATVESSKANCDIDAHSNEKLDEQHSSDEDEGEEHAKEEMTATQKTADSAEDENNIESLMCEETIPGSPPSQNDLLQLDEKTLTDTDQEIKLEPSGASSNCSEVLISCKQENVLNDGALDSSPLISKLNDTSSPSSHQQIEVDVSLIKQEIKQEQDNDNDKSNATPSTSLKKDGNKIPASSEGRAKKPEARAPARRGRRAKKKCEDNPRRKYSRQAKHHGSESDDGYDGGNASNRPDPVKNYVPLGRNFLIPQERLAPLGSQQRINLLMQAVQDLRNNYAELKTELAALDKRRKRIRRREREQAARLHSTRNH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-