Tsal011679.2
Basic Information
- Insect
- Tuberolachnus salignus
- Gene Symbol
- pnr
- Assembly
- GCA_956483605.1
- Location
- OY101433.1:30495624-30510638[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-18 1.4e-14 53.7 3.2 1 34 206 238 206 240 0.97 2 2 4.5e-19 9.5e-16 57.5 3.2 1 36 317 351 317 351 0.98
Sequence Information
- Coding Sequence
- ATGTACCAGCGgagtaacggcggcggcggcggaaaccTATACCCGACGTCCCTGCAACAGTACTTTACATCTTCGCCCGAACTGATCAATCAACAGCAGCCCAACCAGCAGATCATCACTTCGGTGGCCGGCAATCACATGTGGTCCACGGTCGTCACCGAAGACGGTACCGGCGGAGGATACTCACCGACaccggccggcggcggcggcggcggcggcaaacaGCAGCAGTCCAATCAGAACGGCGGCGGACTGCCCGCTTTCACCCAGCGTTTCGGCACGCACACGCCGTCCTCGTCGGCGTACACCGGCTCCGGCGGTTCGGGCAGGTCGTCGTACCATCCGATCACCTCGTCCGGCGTGGGGCCCTATCATTTGGCCGCGGCTGCCGCCGCGGCCGCTAACAGCGCCGGCGGCGGCTCGTCGGACGCCTCGTCGCTCCAGTGGGCCGCGGCCGTCGCTTCGCACGGCGGTTACCCGAACACCGACGGCACCATAAACTACGTGCCCATGCCCAACAATCAGACGGGCAGGAACCGGTCCAACGCCGCTTTTTCCGCTGCCGCCTCGCTATCAGCTTTCGACGAGATGGACATGTTTTGCGAGGGTCGGGAGTGCGTGAATTGCGGAGCGATTTCCACGCCATTGTGGAGGCGCGACGGCACCGGCCATTACTTGTGCAACGCGTGCGGACTTTATCACAAGATGAACGGCATGAACAGGCCCTTAGTGAAACAACCCAAACGGCTGGTTAGTGTTTTTCGAAAAACTCAACCGGGCGTGTGCGTATTGGCTTCCGGCCCGAGCGCGTCCGGTTCTGGGGATTTCTATAAGGGTCCTCTGTATCATCATGTGCCCGCAAGTTTCCCAAGATCTTCCGGAGCTACCGGACTAGAAGAGAAAACTACAAGAAGAATGcAAAATGCGTCTAGACGCCAAGGGTTGCAGTGCACAAATTGTCAAACGGCTACCACTTCGTTGTGGCGCAGGAATCAAGTGGGCGAGCCGGTGTGTAACGCGTGCGGTTTGTATTTCAAGTTGCACGGTGTCAAGAGGCCGCTCACAATGAAAAAGGACTCTATTCagACGAGGAAGCGCAAACCTAAGGGCGGTTCTAAAATGGAACCCGAACCGAAGAGAGTGAAACAAGAAATACcGTCTGAACACAGCTACAGTGACTGTCACCGTACATCGGGCAGCATATTAAATCATGGCAGTGCCAGTTCGGCTCTTGCGTATTCTAGTCTGTACCAAACGGCTACACACATAACCCCATACTATGACACCATCAAGTCGGAATCGTCGCAAGAGTCCATAAACAGTCCACATATAGTGAGCCTTGCGTCGgctaacaacaacaacaacaacaacaacaacaacaacaacaatagcaACAAGGACAGACCAAGCGTTTTATCAATGTCTGTTATttcctaa
- Protein Sequence
- MYQRSNGGGGGNLYPTSLQQYFTSSPELINQQQPNQQIITSVAGNHMWSTVVTEDGTGGGYSPTPAGGGGGGGKQQQSNQNGGGLPAFTQRFGTHTPSSSAYTGSGGSGRSSYHPITSSGVGPYHLAAAAAAAANSAGGGSSDASSLQWAAAVASHGGYPNTDGTINYVPMPNNQTGRNRSNAAFSAAASLSAFDEMDMFCEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPKRLVSVFRKTQPGVCVLASGPSASGSGDFYKGPLYHHVPASFPRSSGATGLEEKTTRRMQNASRRQGLQCTNCQTATTSLWRRNQVGEPVCNACGLYFKLHGVKRPLTMKKDSIQTRKRKPKGGSKMEPEPKRVKQEIPSEHSYSDCHRTSGSILNHGSASSALAYSSLYQTATHITPYYDTIKSESSQESINSPHIVSLASANNNNNNNNNNNNNSNKDRPSVLSMSVIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -