Basic Information

Insect: Tuberolachnus salignus
Gene Symbol: -
Assembly: GCA_956483605.1
Location: OY101432.1:8549093-8552191[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.018 1.9 9.5 0.1 2 23 130 149 129 149 0.91

2 17 0.019 2.1 9.3 0.0 1 23 161 184 161 184 0.94

3 17 0.23 25 5.9 0.0 2 21 249 268 248 271 0.87

4 17 0.004 0.43 11.5 0.4 1 20 283 302 283 304 0.94

5 17 0.4 43 5.2 2.0 3 17 311 325 310 331 0.76

6 17 0.083 8.9 7.3 0.6 2 23 343 365 342 365 0.94

7 17 2.1e-05 0.0023 18.7 0.7 2 23 372 393 372 393 0.97

8 17 0.0004 0.043 14.6 1.7 1 23 399 421 399 421 0.97

9 17 3.9e-05 0.0042 17.8 0.8 1 23 427 449 427 449 0.99

10 17 0.08 8.7 7.4 0.1 1 20 460 479 460 481 0.92

11 17 0.00029 0.032 15.1 0.2 2 23 500 522 499 522 0.94

12 17 0.0048 0.52 11.2 1.7 1 23 534 556 534 556 0.98

13 17 0.0025 0.27 12.1 2.0 1 23 625 648 625 648 0.98

14 17 0.036 3.9 8.5 1.3 1 23 660 683 660 683 0.95

15 17 0.0012 0.13 13.1 9.1 1 23 693 715 693 715 0.96

16 17 0.0031 0.34 11.8 0.1 3 23 767 787 766 787 0.96

17 17 2.6 2.8e+02 2.6 0.1 1 16 842 857 842 865 0.80

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.018	1.9	9.5	0.1	2	23	130	149	129	149	0.91
2	17	0.019	2.1	9.3	0.0	1	23	161	184	161	184	0.94
3	17	0.23	25	5.9	0.0	2	21	249	268	248	271	0.87
4	17	0.004	0.43	11.5	0.4	1	20	283	302	283	304	0.94
5	17	0.4	43	5.2	2.0	3	17	311	325	310	331	0.76
6	17	0.083	8.9	7.3	0.6	2	23	343	365	342	365	0.94
7	17	2.1e-05	0.0023	18.7	0.7	2	23	372	393	372	393	0.97
8	17	0.0004	0.043	14.6	1.7	1	23	399	421	399	421	0.97
9	17	3.9e-05	0.0042	17.8	0.8	1	23	427	449	427	449	0.99
10	17	0.08	8.7	7.4	0.1	1	20	460	479	460	481	0.92
11	17	0.00029	0.032	15.1	0.2	2	23	500	522	499	522	0.94
12	17	0.0048	0.52	11.2	1.7	1	23	534	556	534	556	0.98
13	17	0.0025	0.27	12.1	2.0	1	23	625	648	625	648	0.98
14	17	0.036	3.9	8.5	1.3	1	23	660	683	660	683	0.95
15	17	0.0012	0.13	13.1	9.1	1	23	693	715	693	715	0.96
16	17	0.0031	0.34	11.8	0.1	3	23	767	787	766	787	0.96
17	17	2.6	2.8e+02	2.6	0.1	1	16	842	857	842	865	0.80

Sequence Information

Coding Sequence: ATGCCGGAAGTCGTTGGCCCCCCGTTACCGGACGCCATTTACTACCGGAAGCCCCGGTATCGCCGCCGGCCGTACCGCCATCACAATATACCGATTGACCCGCGGAACCAAGTGATCTATCACGTCGGGCAGCTCGCCGACAAGAGTGCGGAGTCGACGGCAGCGGTAGCGGACAGCGCCGGAGAAGACGacacggcagcggcggcggacAGGAACAGAAAGGGCAGGCCCAAGGGGTCGAAGAATAGGTCGCAGTTCAACTCGTTCAACGACGAGTGCGAGAAGCGGTCTTTCGTGTACACGTTCGCCGGCCCGACAAAGTGCAAATCGTGCGAACGGACGTTCGTCGGCGACCCGGCGGCCCACTGTCACGAATACCACAAAACGGTGTGTCCCATATGCGGTCGGACGTACAAACCGCCGTTGACCGCGCACATCAAGTCCCACGGGACCCGGCACGTTAGGCTGACCGTCGAGTGCTACGAGTGCTACGAATGCAAGGAGAAGTTCGGCAACGCCGACACCATAGCGGCGCACGTCCTAAACGAACACTTacagggcggcggcggcggactcgGGGCCGAGGGCCCGTCGTGTTGCATATGTGGCTGGACCGCGGGGACCGGGCCCGACGGCGTTGTTGATCTACGGGAACACGTGACCGTGGTCCATACCGACACCCCGACGCATCTGTTGTACAAACACCTTCAGCAGCAGAACACCACCGCGGCGGTAATCGACCTCGAGTGCACGCTGTGCGGCGTCCAGTTCGACGACCGGGCGGCCGTCGTCAGCCATTTGGTGGACAAGCACTGTCCCCGTAAGACGTTCAGCCACCCGGCCGTGTACAAGTGCCGAGTGTGCGGGGCGGGCTTCAAGAGCCAGATAAACGTGTTGCGGCACGCGTGCAACAAAATCAAGTCTCCGCACTGCGACCAGTGCGACAAGACGTTCCCGTCGAAAATGCGGTACGCGTTCCACTTGCAGTTTCACAACGATCACCCCAAGTGCACGGCCATGCACCTGCACTGCGACATGTGCCTGGCAGAGTTTGACGACGAGTACCAACTGTACGATCACATCCGGTTCCGGCACGAGCTCCACGACAAAGCCGTGTGCGAGACGTGCGGCCGGACGTTCAAGTCGTCGATGGGCCTGAACATACACCGCCGGTACCACGTCGGGTCCCGGAATTTCACGTGCAAGTTGTGCAACAAGTCGTTCTTGAACAGATCGACGCTCCGGGAGCACGAGATCTCGCACATGGACGTAAAACCGTTCCAATGCAACATATGCGGCCAATACCTGAGCCGGGCGTCCCGGCTTCGGTCCCACGTCAAGACGCACCGGGCCGCGGAGTCCACCGAGCAGACGTGCTACAGCTGCGACGAGTGTGGGTTTGTGGCGCCCAATCAGAACTTGCTGGCCGAGCACGCGTGCAAGGGATACCGCGAGGGTGGCGGCGGCGTGACCGTGGCCCGACTCTCGTCGGTGGTGAAATGCGAGTATTGCGACTCGACGTACGTGAACGCGGAACACCTGAACGCACACCGGAACGCGGCCcacgacaacggcggcggcgacgactcCGCCGAAGAGTTCGTATGCGTTGTGTGCTCGTCCCGGTTCAGCACGTATTCCCGGTTGACCACGCACAAGCTGACGCACGGCATAAACATGGAGTCGGCGATGATGGACcaggccgacgacgacgacgaaagtCCCGACGACCCGCAACAGGACGCGGCGGCCGACCACGACCGGTTCACCGTGCCGCAGTACTTCGCGTGCCAGTACTGCTCCAAACGGTGCTTGCACTACACGTACTTTTGCCTGCACCGGCGGCTCAAGCATCCGCCGGGCGTCCTGGCGTACACGTGCAACCAGTGCTCCGTAGATTTCAAAACTTCCTGGAAACTGTCCTACCACAAGAAGACCGTTCACGGCTTACCGGCCGAGGAAAAGATGCCGGAAGAGTACGAGTGCACCTTGTGCTCCCGGAAATTCTTCAAGATCGGCGCCCTGAACCTGCACAAGACCCGCAGCCACATCGACGTGGGCAGTGACGTGTGCAAGTACCTGTGCCACCACTGCGGCAAGTTCTTCAGCTCCGAGTGTTCGCTGAGAAACCACAACAAGACGCACGACAAACGACAAATCGCGGCACTGCCGATTGCCCAACAACAAAGTCAACAACCGGCGGCCGTTAACCAGCAACACAACCGGTTCAGAACGTACAGGAAATCATCGGCCGCCATCACCGCTACTGGTGGCAAACCGACCGCTGTCCAGAACCCGTGTCCGTACTGTCCGTATAGCACCAACGACAAGGCTACGTTCATCGACCATGTCACCCGGCACATACAGACCAAATCCATTTCGTTCGTTGCCACCGCTGCCCCGGCGTCAACTGCCATGACCGTCGATTCCGCAACCGCGACAACCTTTAGATCCACAGCCCCGACCGCCGTAGTACCTACCGCCACGGCCGTCACGACCGCCACACTCGCCAGCCCCAAAATCTTTCGGTGCCAATTGTGCGACGTGGAATTCGACGAGCCCGGACGGCTGTTCAGGGCCCACCTGGAAAACCACGCGGACCGTGGCGAAGCGTTCTTGTGCCAGTCGTGTTACGTGCCGTTCATGTCGTGCGCCGCGCTCAGTGTGCATCGTGCCGGGACAGCGCTGTGCGGCCAACGCCCGGACGTCCGGTTCGTGGACGCCGCGCCTTCtcccgtcggcggcggcgaaacCCGTCAGGACGTCGCCCTCGTCCGGCGGCCGCTGATCGTCGACTGtacgaaaatattcaaaaaccggacgccgccaccgccgccgccgccgccggttaaaCAAGACGCCGCCGTACACCGGACACCGCCGGCCATCGGCGAGTTAGACTCGTACGCGCTCGACGAACTCATGGCCATCATTTCAACGCCGCGCTCGCCTGTCGCCCTGGACGACGTCAACTTTGTACCGTCCCCCGACTATCTGAACGGTATTTTCGACAGCATCTGCACGTCCGCCGGGGACCGTCACGACGTCGCGTCCACGACACCGCGTAGCGCACGGACGCTCCGGAAGACCTCGCCCTaa
Protein Sequence: MPEVVGPPLPDAIYYRKPRYRRRPYRHHNIPIDPRNQVIYHVGQLADKSAESTAAVADSAGEDDTAAAADRNRKGRPKGSKNRSQFNSFNDECEKRSFVYTFAGPTKCKSCERTFVGDPAAHCHEYHKTVCPICGRTYKPPLTAHIKSHGTRHVRLTVECYECYECKEKFGNADTIAAHVLNEHLQGGGGGLGAEGPSCCICGWTAGTGPDGVVDLREHVTVVHTDTPTHLLYKHLQQQNTTAAVIDLECTLCGVQFDDRAAVVSHLVDKHCPRKTFSHPAVYKCRVCGAGFKSQINVLRHACNKIKSPHCDQCDKTFPSKMRYAFHLQFHNDHPKCTAMHLHCDMCLAEFDDEYQLYDHIRFRHELHDKAVCETCGRTFKSSMGLNIHRRYHVGSRNFTCKLCNKSFLNRSTLREHEISHMDVKPFQCNICGQYLSRASRLRSHVKTHRAAESTEQTCYSCDECGFVAPNQNLLAEHACKGYREGGGGVTVARLSSVVKCEYCDSTYVNAEHLNAHRNAAHDNGGGDDSAEEFVCVVCSSRFSTYSRLTTHKLTHGINMESAMMDQADDDDESPDDPQQDAAADHDRFTVPQYFACQYCSKRCLHYTYFCLHRRLKHPPGVLAYTCNQCSVDFKTSWKLSYHKKTVHGLPAEEKMPEEYECTLCSRKFFKIGALNLHKTRSHIDVGSDVCKYLCHHCGKFFSSECSLRNHNKTHDKRQIAALPIAQQQSQQPAAVNQQHNRFRTYRKSSAAITATGGKPTAVQNPCPYCPYSTNDKATFIDHVTRHIQTKSISFVATAAPASTAMTVDSATATTFRSTAPTAVVPTATAVTTATLASPKIFRCQLCDVEFDEPGRLFRAHLENHADRGEAFLCQSCYVPFMSCAALSVHRAGTALCGQRPDVRFVDAAPSPVGGGETRQDVALVRRPLIVDCTKIFKNRTPPPPPPPPVKQDAAVHRTPPAIGELDSYALDELMAIISTPRSPVALDDVNFVPSPDYLNGIFDSICTSAGDRHDVASTTPRSARTLRKTSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -