Tsal018705.1
Basic Information
- Insect
- Tuberolachnus salignus
- Gene Symbol
- JARID2
- Assembly
- GCA_956483605.1
- Location
- OY101437.1:11101038-11114749[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-20 3.8e-17 62.8 0.0 8 89 1701 1780 1695 1780 0.92 2 2 7.7 2.2e+04 -3.8 0.0 49 61 1794 1804 1791 1818 0.76
Sequence Information
- Coding Sequence
- ATGTCTTCGAAAGGGTCGTTGGACCCAAAGAAGCGCAAGCTACTGACCAACGATGAAGCCCTCCTCGAAGCCAGTACCAAAAAAATCAAGGTACAGGCTCAGCGTAAATTTGCCCAAAATGCAGTGACGCCCACTAGTACTCCACAAAAACTTGTTCAAACTCCAATTGTGCCTAATAATCCAATAAAGCCACCGATAAAACGACCAAATACCGAGGACTTCCTTACTTTTCTTTGTTTTAGAGgcACAAGCTTATTACCGCCACGATTAGATTTCTTTAATAAACCGCAACGCTCTCTATCGGCTCAAGAAATTTCTGCTGGAAaaAAAAGAAGAAAGAGCACTCCTATACTGCCAATGtctaattcgaataaaaatgttaacgaaCCCAGTGAAAGAAAAAGACAATTACAGCAAACCAAGTATTCATTGTCAAAATTAGGACAAAAAGttataggGCGAAATCTCGTTAGATGTAGTGCCAGGTATACTGCCCGACAAGAAGCTCTTACTCTGCGTCAAATAGCCCTCCGTCAtggttcaaaaataaaaaaaccaaaaccaaaaccaaaaccaaaagtCAAAAAAGTtccggttaaaaaatatatcaaaacagaAACAAAGAAAAGTTGTAAACAAGTTTCATTGGATGGCAAgcaaatacaaaaattgaaagGCCGTATAACAAGATCAAACTCTGTACCAAGTATCTTTTGTCCTGCAATAAATCAACTTCGAGatGATAAAGGTAAATGGATCAAGGGTAATTATAAACCCCCTTCTTCAAAATCATCTGAAGATTTTAAGGATTCTAGAGATGTCGAAGAAGAGAGACCATCGAGAAAAAAGACTGTATCAAAGAATTTAGATCATAGTACTAACAATGCCAATAACTTGAAACGAAAAACAagtgaaaataaatgtaaaatggtaaacaaaaatgaaagaaaaactaGAAGTTTAGCGAGTAAACATAAGAGCTATGACCAAGACAATTATGTTGTTCCTGATAAAAATTTGAAGActgtatcaaaaaataataaagcaaaCAGTGTaattgtaacaaaattatcATCCGATGTAAAACGAAGAACAGCTTCAGTTGACAACGTGAAAACAATCCATGATAGTAAAGATCCAATCAGTTCAACTCGTTCAAGACCTCCTAGAAGAACTAAGGAAGCTGCTACTTTATTTATGGAAATGTTAAGAAAAGATATACGTTGTCCCGATGAGCAAGAAGAAGATGAAACATCATCTGTAGAAAGTTTCCCTGATCTACCCAACACACGAGTAAAtgAACAACGCGAACGGGAGTTGAAAGGGTTTTCGAAAAAACAGTCGATCGATGCGCGACACGACGAAAAACGTCGTTTGTTGGAAAACAGCGATGATCATCATTCGCCTACCGTAGCCGATAAAAAAAAGACTGCCGTCGATAAAAAGACCGCgaaagagaagaagaaaaaagtcaAGGCAAAAACGCCGAAAACTGTGACCACCGAGACAACAGTTGCTGCCATTACTGATAACGGAGGTACGTCTTCGTTTAAGAGGAATCTGAGACCTCGCCGCCCTTCAACGATGCTTGATGATTATATcatgactgattcggaagaagATTTCGAGAAACCGGAACCCGTAACGGTACCGAAAAAATGCGAATCCTTTTCTAAGACTTCGTCGAAGACGGCAACGTCGGCGGCAACGGGGGGCTCCTCCGCGCCTCAAAAAATTAAGTTTAGTACCGAAGAATCTGTAAAAAAGAATCTTAAAATCAATAAGACTGACTTGAAACCGAAAAAAGATTTCAATAAAATAGATTCCGATGCGATTAATAAAAAGAGTCTTTCTGAAACTaagtcaaaaaatattatattaaaacgtcaCAAAGAGCTCGAAATCAAGAATACTGAAAACACGCCTGCCGacaagaaaattgaaaaatcatcaaaaaataaGACTGAACCCACCCCTGTATTTATTAATGTAGAACTAAAAACTGCCGCCGGCGAATGTTCGAAAAACGCCGAGAAAAAAGTGCCACTCTCGAATAAGCAGCAACAGCAGCGACCGCAACAGCAGCCACAAccacagcaacagcagcagcagcagcagcaacagcaacagcagcaacagcaacagcaacagcaacagcaacagcaacagcagcagcagcagcagcagcagcagcagcagcagcagcaacagcagcagttGGCGAGAAAGGAAAACGCCTCGAACAAGAAAAAATCCACATTGGAtttgtacaacaataattataacggcACCAAAAAACTATCTACCGGACAGCCGTCGTCCACTTCGTCTTCCATGTTTAGAGGTATTACTAGTCAAACGAGAGAAGAGCTTTTGGAACGCATGGCTGTGAATTTCGAAGCAAAGCCGCCGCCTGCCGCTTGCAGACTGCAGGACGACGAGAAATCGGCGAAAAAACCAGCGATGTCGACGAAAGTGGAAAACAACTCCGCCGTGGTGGAAACAAATTTTGAAAGCGGCAAAACGGGGAAAATCTCGCCGTACAGCGCCGTCACGGTGGACAGAAAAATCAAAAGCAGCGCTGTGGTCGgggtatacaataatatgcaaAACGGCGCCAGTAGACCGGCGGTGTCCGGTGGCTCAGCCTCAGCGATGGAAACTCAGCAGGGCGACGACAATGTGGCCAAAAGAAAAATGGCGGCAGCCAGTGAAGCGCATAACGTTAAACTGGAATTGAAAGTGTCAAAAACGGAAAATGTGCAGTCAAAAGAGGAGAACGTCGTCATTGCCGTGACCACCAGAACgggaaaaatggaaaatatcatTATGGTCGTGGACAAGGTGGAGAAAACCGAATCGCCGTTGCTGCCGTACTGCAACAAGGtggaaaaagttgaaaaaatcgTGTTCCAGTCACTGGCCAAAGACCTGTTCTTGCAGGGCCACCAGAAAGAGATCAAGATCACTATGCCCGAGTATATGTCCGGCAATAACTTCCAACTGTCCAATCGGTTCAAACAGGACGATGGTTTATCGGTGCTGTCCGAAATCTGCAGCGCCCTGCCCAGGTTCAACGAGCCGTACGTGTCCAATAGGCAGCAGATAATTAACAACAAACTGCCCGCGGTGCCCGTAGACGGTGGTTTCTTGAAGTACGCGCACCATCAGCATTCCCCCACGCTGGTCCCCGTGCCACTGGCCGTTGGAGTGACGGACCAGAAGACTGAAGATAAGCCACCGGTGCTTCCGCCGCCGCTAACACAGCCACAGCTGCCGTCCCTGCCGCCGCCGCAGTCTCTGCCGCACCCACTGtctctgccgccgccgccaccaccgccttCGTTCGAAAGCCGAACCGTAAAAATGGTCAACTTGGCCCGGGGTGGCAACAACAGTTCCACTGCCGGCACTGTGGTCGGCAACTGCAACGATAGAAATGATCTTACCAAGCCGTGGAAGCATTCGTtcaaaaacgtaaaattacCGAAAAACGGACTATCGCCCGGTGTCGCTGCCGTCGTTTCACCCGGCAACAACTCGGTCGCTTGGGGGTGTGCCAAGCGGATACAACCGTCAAACGACAATCAAACGCCGTCGCCGAAAACACGCGTCCAGGAagagacaaataataaaacgataaccgCCACTGCGGGAGCGAGCGTAGGAAACCCGGTGAAAGCCACCATGCAGTCGGCCGTTCTGCTGGTGAACGGCGTCGCGGAAAAGAAATCTTTCGAACATTATTCTTATTCGTGCCCAAAGACTTGCTGCGGCGAATCGAAAACCGCCGAATCGTTGGACGGCGGCAAGAAGACACCGGTGGCCAACAACGGTGCGTCCTACTTGGCCAAGACGACCATACTGAACAGTACAAAATACgatttgaaattcgaaaaacgttccgcggcggtggcggtagTGCCGATGTTAGCGACGACGGCTACACCCGTCACCGTAGAAAAACATCACCGCAAAGACGCGGCCGGCGACGTGTCGTCGTCCGAAGACCAGAGTCCCGAAAAGAAAATCTTCAATCAGCGGCGGTTGTCCACCAACCAGTCGTGTAGCGGAAACAGTTCCGACGCTTTTTCGCCCGACAACGAGACGAGCGTTTACGCTTTCCAACCCGACTTGCCGGTGGCCAGCACGCCTTTCCGCCGGAACAAACCCCAATCGCCCGCCAAATCCAGGACGGTTTCGCCCAACACGTCCATCGCCGtgaattttgaaaacgattCTACGGAGGAAAAATCTCATCAGTCCGCCGTGTCGTCGACAACAGACGTCGACAGCGAGGACGGCCGACTATTTTATATTCCTTTGCCCGCCGGTGTTCAGGCCCAACCGTTGATCCAGGGCGTAACGGTCAAACTGGGCACGGAGGGACCGCAAAACAAATTGGTGATGAGCGCCAAGCTGGTGACCAAACCCCCGGCGTCCACGATACCCATCAGTTCCATATCGCCGAAAACCGAGCGAAAAATCAAGCCTTTGTGTTCGACCAAAATCACCAATAGCACCACCCCCGTTGGAACCGTCCAGCCGACTACCCGAGCTGTTCAGCCCCCTAAATGTAACCCCTCGACTTCGAAAGAAGTGTTACCATTACAGTCACAACCACAAATACAAGATGCAAAAGACGAAAAGAAACGGTTACAAAAAACAACCACGACTACAAATACTACTGCCACTACCACTAATAGTACTGCtaaggaattaaaaaaatcgtcaatatCGTCTTTGCATCCTGTCTCCACTGCCAATAATAAGAAACCGAAAAAGACTGAAAAACAAGTAGTTAACAATAAGAGGAAATCCAGCGAGAAAGTAGCCTCGAAAAAGAAATCGTTGAGAGATGAATGCGTCGACATGGTGGAAGCACCGACATTTTATCCGTCCGAAGAAGATTTCAAGGATCCcttggaatattttgaaatcgtCAAGCCAGTCGCCCAAAAATATGGTATATGCAGAGTAGTGCCGCCGCCCAGTTTTAAGCCGGAATGCAAAGTCAGTGATGACATGCGGTTTACGGCATACAACCAGTATGTGCATAAAATGATGAACCGATGGGGCCCAAACGTCCGCGAAATGATAGCTATGAAAAAGTACCTGAAAACACAGTCGATAGTGTTGACCAATCCACCGCTTATCGGCGGCATGGAACTAGACCTGCCCAGGCTCTACCATACGGTCCAAGAGCTTGGCGGCCTCAAGGAAGTAATCGAGTTGGATAAGTGGTCCCGCGTTGCCGACCTGATGAAAATACCGAAAAGTGCCCAGGATCGTGTCACTAAACTCGACGATATATACTGTAAATATCTGTTACCGTATGACACGCTTTCTCACGAGGAACGCCAAAAGTTAATCGCCGAAGTGGACAAAGAGTGGAAACAGATCTGCAAGAAAGACGACACGGAAGACGAATTGTACGAGGATGTCAATGATTGCATAACAAAGGGTCGAAGTGTCGCGTTGAGCGCTTATTACCGGGTGGCCCGTAACACCGTCGCTATGTGGTTCAGAGAACAACAGCAACAGCCTGCACAAGgtggcggcagcagcggcgttAATACATCCGTCAATAACAACAGCAAGCTAGCCGTGGCCGCTGTCCGGGCCGAGGACGTCGAGGCATTGTACTGGAAAAACGTGCAGGACAAAAAGAATCACATATGCGTGCTGTCCGGGTCGATAGACTCAGGGGCCGAGGGTTATGGATTCCCGACCACCAAGACGGCCACGTTCACCAAACACCCGTGGAACCTGAAGGTGCTGACCAACAACCCAGTGTCTGTGCTCAAGTCGCTAGGCCCTGTTATGGGCATGACCGTGCCCACTATACACATGGGCATGGTGTTCTCGGCTTGCTGCTGGTATAAAGACCCGCACGGGCTCCCGTGGATCGAGTACCTGCACACGGGCGCCGACAAGGTGTGGTACGGCGTACCGTGCGCGTACAGTGACCGGTTCCGTGTGGCTATGAAGCGACTGTTGCCCAGGGCTGTAGCCGAGGGAGGAAACCACCACACCTGGCTGGCCGCCGACAGTGGCATGGTACCGCCCGGCCGGCTGCTCGAGCACGGTGTCCCTCTCACGCGTACCGTCCAGAACCCCGGCCAGTTCCTGATCGTCATGCCGCACGCCTACACTTGCAACGTGTCTACCGGTTACGTCATCTCTGAGAGTGTCTACTTCACGCAGTCCAGTTGGCTGGATGACGCCGAGAGGGTTTTCCAGGAATTGCAAAGGAACTGTGAACCTGCTGCGTTTTCGTTCGAAAAGTTACTGATAAACATGTCTACCGATTCTCGTACGCCACACAACATATTGAAACAGTTGCTGAACATATTGAGCAACACGAGAGACTGCGAAGTAGCGCTCAGGAGTCAGCTGGTCGAGGATTTGGGCCTAAAGTCGTCCGAACGGATTCGGGTCCCGGCGTCCAAGTCGAACGAACCAATCGACGACTACGAGTGTGACGTGTGCCATTCAATCCTTTACATATCAATGgTGAACAATTCACACGACGATTGCGATTATTGTCTGAGACATGGTATCGAGATTCTGTCAAAAAAACACAATCAACTTAAATATTGCAAGTTTATGTACACTTTCGACGAGGCCGAGTTGGATTCGATATTGGTGAAATTGCGCGAGAGGTTAGATtctaagaaaaagaaaatctcAGCGAAGAGTTGA
- Protein Sequence
- MSSKGSLDPKKRKLLTNDEALLEASTKKIKVQAQRKFAQNAVTPTSTPQKLVQTPIVPNNPIKPPIKRPNTEDFLTFLCFRGTSLLPPRLDFFNKPQRSLSAQEISAGKKRRKSTPILPMSNSNKNVNEPSERKRQLQQTKYSLSKLGQKVIGRNLVRCSARYTARQEALTLRQIALRHGSKIKKPKPKPKPKVKKVPVKKYIKTETKKSCKQVSLDGKQIQKLKGRITRSNSVPSIFCPAINQLRDDKGKWIKGNYKPPSSKSSEDFKDSRDVEEERPSRKKTVSKNLDHSTNNANNLKRKTSENKCKMVNKNERKTRSLASKHKSYDQDNYVVPDKNLKTVSKNNKANSVIVTKLSSDVKRRTASVDNVKTIHDSKDPISSTRSRPPRRTKEAATLFMEMLRKDIRCPDEQEEDETSSVESFPDLPNTRVNEQRERELKGFSKKQSIDARHDEKRRLLENSDDHHSPTVADKKKTAVDKKTAKEKKKKVKAKTPKTVTTETTVAAITDNGGTSSFKRNLRPRRPSTMLDDYIMTDSEEDFEKPEPVTVPKKCESFSKTSSKTATSAATGGSSAPQKIKFSTEESVKKNLKINKTDLKPKKDFNKIDSDAINKKSLSETKSKNIILKRHKELEIKNTENTPADKKIEKSSKNKTEPTPVFINVELKTAAGECSKNAEKKVPLSNKQQQQRPQQQPQPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLARKENASNKKKSTLDLYNNNYNGTKKLSTGQPSSTSSSMFRGITSQTREELLERMAVNFEAKPPPAACRLQDDEKSAKKPAMSTKVENNSAVVETNFESGKTGKISPYSAVTVDRKIKSSAVVGVYNNMQNGASRPAVSGGSASAMETQQGDDNVAKRKMAAASEAHNVKLELKVSKTENVQSKEENVVIAVTTRTGKMENIIMVVDKVEKTESPLLPYCNKVEKVEKIVFQSLAKDLFLQGHQKEIKITMPEYMSGNNFQLSNRFKQDDGLSVLSEICSALPRFNEPYVSNRQQIINNKLPAVPVDGGFLKYAHHQHSPTLVPVPLAVGVTDQKTEDKPPVLPPPLTQPQLPSLPPPQSLPHPLSLPPPPPPPSFESRTVKMVNLARGGNNSSTAGTVVGNCNDRNDLTKPWKHSFKNVKLPKNGLSPGVAAVVSPGNNSVAWGCAKRIQPSNDNQTPSPKTRVQEETNNKTITATAGASVGNPVKATMQSAVLLVNGVAEKKSFEHYSYSCPKTCCGESKTAESLDGGKKTPVANNGASYLAKTTILNSTKYDLKFEKRSAAVAVVPMLATTATPVTVEKHHRKDAAGDVSSSEDQSPEKKIFNQRRLSTNQSCSGNSSDAFSPDNETSVYAFQPDLPVASTPFRRNKPQSPAKSRTVSPNTSIAVNFENDSTEEKSHQSAVSSTTDVDSEDGRLFYIPLPAGVQAQPLIQGVTVKLGTEGPQNKLVMSAKLVTKPPASTIPISSISPKTERKIKPLCSTKITNSTTPVGTVQPTTRAVQPPKCNPSTSKEVLPLQSQPQIQDAKDEKKRLQKTTTTTNTTATTTNSTAKELKKSSISSLHPVSTANNKKPKKTEKQVVNNKRKSSEKVASKKKSLRDECVDMVEAPTFYPSEEDFKDPLEYFEIVKPVAQKYGICRVVPPPSFKPECKVSDDMRFTAYNQYVHKMMNRWGPNVREMIAMKKYLKTQSIVLTNPPLIGGMELDLPRLYHTVQELGGLKEVIELDKWSRVADLMKIPKSAQDRVTKLDDIYCKYLLPYDTLSHEERQKLIAEVDKEWKQICKKDDTEDELYEDVNDCITKGRSVALSAYYRVARNTVAMWFREQQQQPAQGGGSSGVNTSVNNNSKLAVAAVRAEDVEALYWKNVQDKKNHICVLSGSIDSGAEGYGFPTTKTATFTKHPWNLKVLTNNPVSVLKSLGPVMGMTVPTIHMGMVFSACCWYKDPHGLPWIEYLHTGADKVWYGVPCAYSDRFRVAMKRLLPRAVAEGGNHHTWLAADSGMVPPGRLLEHGVPLTRTVQNPGQFLIVMPHAYTCNVSTGYVISESVYFTQSSWLDDAERVFQELQRNCEPAAFSFEKLLINMSTDSRTPHNILKQLLNILSNTRDCEVALRSQLVEDLGLKSSERIRVPASKSNEPIDDYECDVCHSILYISMVNNSHDDCDYCLRHGIEILSKKHNQLKYCKFMYTFDEAELDSILVKLRERLDSKKKKISAKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -