Basic Information

Insect: Trypoxylus dichotomus
Gene Symbol: L
Assembly: GCA_014905495.1
Location: BNES01000014.1:951168-964643[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.5e-07 2.2e-05 25.1 1.1 1 23 117 139 117 139 0.98

2 18 0.8 72 4.6 7.1 1 23 145 167 145 167 0.97

3 18 4.4e-06 0.00039 21.2 2.4 1 23 173 195 173 195 0.99

4 18 0.00097 0.086 13.8 1.2 1 23 201 223 201 223 0.97

5 18 3.4e-05 0.003 18.4 1.2 2 23 249 271 248 271 0.96

6 18 0.052 4.6 8.3 0.1 3 23 307 328 306 328 0.92

7 18 0.15 13 6.9 1.8 1 23 359 382 359 382 0.95

8 18 0.0091 0.81 10.7 0.1 2 23 476 497 476 497 0.96

9 18 0.0051 0.46 11.5 6.8 3 23 507 528 506 528 0.93

10 18 0.038 3.4 8.8 0.2 1 23 533 556 533 556 0.92

11 18 0.0001 0.0092 16.8 1.5 1 23 617 640 617 640 0.97

12 18 0.0098 0.87 10.6 1.9 1 23 692 715 692 715 0.95

13 18 0.00028 0.025 15.5 3.5 2 23 730 751 729 751 0.96

14 18 0.0001 0.009 16.9 0.4 1 23 761 783 761 783 0.98

15 18 3.6 3.2e+02 2.5 0.6 1 12 860 871 860 873 0.85

16 18 7.9 7.1e+02 1.5 0.1 2 23 939 960 938 960 0.92

17 18 0.00048 0.043 14.7 0.0 1 23 968 990 968 990 0.97

18 18 0.0082 0.73 10.9 0.8 1 23 997 1019 997 1019 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.5e-07	2.2e-05	25.1	1.1	1	23	117	139	117	139	0.98
2	18	0.8	72	4.6	7.1	1	23	145	167	145	167	0.97
3	18	4.4e-06	0.00039	21.2	2.4	1	23	173	195	173	195	0.99
4	18	0.00097	0.086	13.8	1.2	1	23	201	223	201	223	0.97
5	18	3.4e-05	0.003	18.4	1.2	2	23	249	271	248	271	0.96
6	18	0.052	4.6	8.3	0.1	3	23	307	328	306	328	0.92
7	18	0.15	13	6.9	1.8	1	23	359	382	359	382	0.95
8	18	0.0091	0.81	10.7	0.1	2	23	476	497	476	497	0.96
9	18	0.0051	0.46	11.5	6.8	3	23	507	528	506	528	0.93
10	18	0.038	3.4	8.8	0.2	1	23	533	556	533	556	0.92
11	18	0.0001	0.0092	16.8	1.5	1	23	617	640	617	640	0.97
12	18	0.0098	0.87	10.6	1.9	1	23	692	715	692	715	0.95
13	18	0.00028	0.025	15.5	3.5	2	23	730	751	729	751	0.96
14	18	0.0001	0.009	16.9	0.4	1	23	761	783	761	783	0.98
15	18	3.6	3.2e+02	2.5	0.6	1	12	860	871	860	873	0.85
16	18	7.9	7.1e+02	1.5	0.1	2	23	939	960	938	960	0.92
17	18	0.00048	0.043	14.7	0.0	1	23	968	990	968	990	0.97
18	18	0.0082	0.73	10.9	0.8	1	23	997	1019	997	1019	0.98

Sequence Information

Coding Sequence: ATGTCCAGGAGGAAACAAGCTAATCCTGCCAAATTGGGCGATACGGAAGTGAAAATGAAAGTAACGAATGAAGATTGTTCATCCTCGAAAGTCTTGGACGATTCTAGCGATGAAAAGGAGTATAACGTTGAAGAAGATGATGATTCAGACGCCTCGGAATTACGAGAAATTGACAATGGATGCTTGGAAAATGAAGATTTCGATGAAGTCAGTATAATGTTAAACGGTAGGGCCAGCAGTCCTTCCAGCAGCAATAGATCGTCACCCACCAGCTGTCGAAGCTTTACGCTTAGTGATGTTACGGATGGCGATGAAAGTTATACCGTTGGGGCAACAGCCACAAACCCTTACGAATGCAATAAATGTAAACGGGCGTTTTCTAGGTCTTCGGAGTTAAGTAAACACATCCAGATCCATACAGATCAATTACAATTTAGTTGCTCATATTGTCGAAGATTATTTAAGCATAAGAGATCGAGAGATCGCCATACGAAGCTCCATACcggtgataaaaaatataaatgcacgCAATGCGAGTCGGCTTTTGCTAGAAGCGATCATTTGAAGATCCATATGAAGACTCATGATAACAAGAAGCCTCATCAATGTGAATTATGCAATAGAGGATATAATACGGCCGCAGCTTTGGCTTCACATCAACAGCACCATGTTAAAAAGGAAGTTAGATGCGGAAGTAGTGCTAGCACCGCTACAGCAGTAAGCACCCCAAGTCCTGGATATCTGAGATGTTCGCAATGTTCTGAATCCTTTAGCAAACCTGAGCAACTCCAGAATCATCAACAATCCAAACATAAATCGATCTCCGCAATAATTAACCAAAATCCATCAACGccagataaaaatttaaatgtagacCAGCCAAAAGATGAGAGTAACATGGAATTTACTAAAGTGGCTTGCATGTATTGCGGTCGTGACTTCCCGAATATGAACCAAATGTATCAACACATCAGTGCGGATCATAGTGCTATATTTCTCACACACAATTTAAGTTACAACCCCCAGATTTCGCCAAGTTCGAAAGATTCTTTTCAAAAAACCAATTTACCGAGCTATGCTTGTGATTTGTGCACAATAAAATGTGAAACGGCGCAGTCTTTGAAAGAACACTTCAAAAATAATCATTGGAAGATTGGCAGCAATCAAAGTTCTGAATCGACTCCATCTGGACTCCAATCAAGGCCTACTGATTTAAGCAGAAAGAGAAGGGTTGAGGAGTCGGAAGaaaatgataagagaaagttagAAGAAAAGAAGACTTCACCATCTTCGAGTAGCCCTTATGACTCCAACGATAAGCCTTGTATATGCTCGTATTGTTACGTACAAATGCCAAATTTCAAGAGTTTTTTGATTCACATGGAAAGTCATGTCTCTTTAAATGCTTCTAATAGTTTTATTGGTTATTGTCCAATTTGTGGAGAACCTAGTAGAGATTCTATAGAATTCAGCTCCCATATTTTTAGTCACGTCGTCACTGATATAACAGGAAGATGTTGCCACCAATGTAAGAAGTCTTTCGACCAATTAGAGCAGCTTCAAAAGCATCACTTGGAAGTCCATTCGCAAAATGTCTACAAATGTACCATCTGTGGAGAGTTATTTGAATCGGAAATAGCTATTAAAGTGCATTTTAACAATAGACACTGTACTGAATGTAAGCATTACAGGTGCAATCTATGTTCACAACAGTATTTTCACGATAAATTAACGGCCGAATTACATGTCTCGATGAGACATGGAAACCAGTTGAGTAGTGCAAGACCTGAACATCACCGACATATTTATGGGAGGACAGAAATGGACTCACGTATGATGTATAGGACATATCAATGTCCATTCTGTCAGAAATCTTTTAGAGacgcatatatgcaaaaatatcATATTTTGAAAGAGCACGAAAGCGCTGATGGTAGAAAGGCTGATAATCTATTAATGGATGTTTGTGGGTTATCCACTGGTTCACCTAGCTTCTCCTATAGGTCGCTATCCTCACCAACACCTTTATTGCCTCAGGAAAACCTTCAAATTGATTCTAAACAGATAGCAAGTCATACCTGTGAGATCTGTCATCGCACAGATTTTACAACGGAAGCTGAATTGGTATCTCACATGAAAATTCATCAAGCCACCCATGCAAAATCCAAAGTTGGTACAGTTAGTTTACAATGTGCTTACTGTAATGAGCACTGTAAATCACGCAGTGATCTCGAAAATCATATGAAAGGTCATCAAGTCTCCTGCGGAGGTAAAGTCAAacataaatgtaatatatgtgatgaaatattttcatcagCAATTACGTTAGCCGATCACAAGTTGACTCATTGTAAAATCGTGTCGGCTAATACTTGCACTCAATGCAAGACAGTGTTGGGCGATGAACAGTGTTATTATTCTCACCAATTGCAACATAATACCAGCTCAACTCTTTCTAAGTCTAATTCCCAAATGACTCTACCTGCAAATTGCGTTATTTGTTGTCAGACCCTTCAAACTGATATCGAAGTGAAGCTTCACGCCAAATTCCATTTGAGGCACCTTTTGCAAAAGGAATTTATTTGTGCGATCTGTAATAAAGTTTGCGATAGCAGAGAAATTAGTGATAAATCTAACGGGGCTTCAATAGCCATTTGTAAAAATTGCAAGAGTAAAAACGGAATTGAATTGGAATTTTTAAGAGTGCAACAGCCAAGACAAGAGGTAGAATATAACATCCATTGCAGACGTGCCTTTGATAAAGCTACCGAGGGGGTGAAAATAAATCAATCGTTAGAAGAAATCGATAGGTTAAGATGCAGATTATGTCGAAGTATTCTACCTTCAATCTCCAAGCTACAGATTCATCTCATAGAACACAACTTCATGGGAATGGGGCAATTTCGATGTTATATTTGTTCTTCTGTTTTTACGACAGCAGCTGGTTTACAAGCTCATATTATTGGACATGGACTCGGGCAAAGCCCTTACGAATGCGTGGAGTGTAAGATGAAGTTTTTCTTTGAGACCGAATTGGAGAATCATAGGATATCACATGTCCTGTCTTCCAACGCGCAAGTAGACGAAATGAGTTCAAGTTCGAGTGTGTTCGGTGAAAAAGTACAAAACGAAAAGCAGTATAAAGTTTGTTGTTATTGTTCCGGTACGTTTTTGGACGTTTGTTTTGCCGAGCACGTTGAAAATTGTTGCAAGGTCGAAATAAAGACGGAAATATACAATGATGATTACGAAAACAAGGACAATTGTCAAAATGAAGGCCAGAATTTGGAGGGGATCGCGAAAGAAGAAAACGAAggataa
Protein Sequence: MSRRKQANPAKLGDTEVKMKVTNEDCSSSKVLDDSSDEKEYNVEEDDDSDASELREIDNGCLENEDFDEVSIMLNGRASSPSSSNRSSPTSCRSFTLSDVTDGDESYTVGATATNPYECNKCKRAFSRSSELSKHIQIHTDQLQFSCSYCRRLFKHKRSRDRHTKLHTGDKKYKCTQCESAFARSDHLKIHMKTHDNKKPHQCELCNRGYNTAAALASHQQHHVKKEVRCGSSASTATAVSTPSPGYLRCSQCSESFSKPEQLQNHQQSKHKSISAIINQNPSTPDKNLNVDQPKDESNMEFTKVACMYCGRDFPNMNQMYQHISADHSAIFLTHNLSYNPQISPSSKDSFQKTNLPSYACDLCTIKCETAQSLKEHFKNNHWKIGSNQSSESTPSGLQSRPTDLSRKRRVEESEENDKRKLEEKKTSPSSSSPYDSNDKPCICSYCYVQMPNFKSFLIHMESHVSLNASNSFIGYCPICGEPSRDSIEFSSHIFSHVVTDITGRCCHQCKKSFDQLEQLQKHHLEVHSQNVYKCTICGELFESEIAIKVHFNNRHCTECKHYRCNLCSQQYFHDKLTAELHVSMRHGNQLSSARPEHHRHIYGRTEMDSRMMYRTYQCPFCQKSFRDAYMQKYHILKEHESADGRKADNLLMDVCGLSTGSPSFSYRSLSSPTPLLPQENLQIDSKQIASHTCEICHRTDFTTEAELVSHMKIHQATHAKSKVGTVSLQCAYCNEHCKSRSDLENHMKGHQVSCGGKVKHKCNICDEIFSSAITLADHKLTHCKIVSANTCTQCKTVLGDEQCYYSHQLQHNTSSTLSKSNSQMTLPANCVICCQTLQTDIEVKLHAKFHLRHLLQKEFICAICNKVCDSREISDKSNGASIAICKNCKSKNGIELEFLRVQQPRQEVEYNIHCRRAFDKATEGVKINQSLEEIDRLRCRLCRSILPSISKLQIHLIEHNFMGMGQFRCYICSSVFTTAAGLQAHIIGHGLGQSPYECVECKMKFFFETELENHRISHVLSSNAQVDEMSSSSSVFGEKVQNEKQYKVCCYCSGTFLDVCFAEHVENCCKVEIKTEIYNDDYENKDNCQNEGQNLEGIAKEENEG*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00627551;
90% Identity: iTF_00627551; iTF_01121038;
80% Identity: -