Tdic010163.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trypoxylus dichotomus
Gene Symbol
ZNF296
Assembly
GCA_014905495.1
Location
BNES01000033.1:463038-481408[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 6.5e-05 0.0058 17.5 1.4 1 23 123 145 123 145 0.97
2 29 0.027 2.4 9.3 0.5 1 23 149 171 149 171 0.95
3 29 0.056 5 8.2 0.7 1 19 206 224 206 228 0.92
4 29 0.00091 0.081 13.9 1.8 1 23 234 257 234 257 0.97
5 29 0.002 0.18 12.8 4.5 1 23 268 290 268 290 0.97
6 29 0.0037 0.33 12.0 0.6 3 23 297 317 296 317 0.97
7 29 0.0023 0.21 12.6 2.6 1 23 323 345 323 345 0.97
8 29 1.6e-07 1.4e-05 25.7 1.8 1 23 351 373 351 373 0.98
9 29 0.0036 0.32 12.0 0.2 1 22 379 400 379 400 0.94
10 29 0.21 19 6.4 1.3 2 23 466 486 465 486 0.95
11 29 0.00024 0.022 15.7 0.1 1 23 488 510 488 510 0.98
12 29 0.058 5.2 8.2 0.3 1 23 515 537 515 537 0.97
13 29 0.034 3 8.9 0.5 1 23 543 566 543 566 0.95
14 29 0.041 3.6 8.7 0.2 2 23 573 594 573 594 0.93
15 29 0.005 0.44 11.6 1.2 1 23 600 623 600 623 0.95
16 29 0.00024 0.021 15.7 1.2 1 20 634 653 634 654 0.95
17 29 6.7e-06 0.0006 20.6 0.0 2 23 666 687 665 687 0.97
18 29 2.4e-05 0.0022 18.8 0.9 1 23 693 715 693 715 0.98
19 29 0.00045 0.04 14.8 1.8 2 23 758 780 757 780 0.94
20 29 1.3 1.1e+02 4.0 1.9 1 23 800 822 800 822 0.98
21 29 0.071 6.3 7.9 3.0 1 23 825 847 825 847 0.97
22 29 0.00064 0.057 14.3 0.4 1 23 852 875 852 875 0.98
23 29 1.7e-06 0.00015 22.5 0.3 1 23 881 903 881 903 0.98
24 29 0.017 1.5 9.9 0.5 2 23 910 932 909 932 0.91
25 29 0.00015 0.013 16.3 0.3 2 23 944 965 943 965 0.97
26 29 4.4e-06 0.00039 21.2 1.6 3 23 977 997 975 997 0.96
27 29 1.2e-05 0.0011 19.8 1.5 1 23 1003 1025 1003 1025 0.99
28 29 2.4e-06 0.00021 22.0 0.8 3 23 1033 1053 1031 1053 0.97
29 29 0.0012 0.11 13.5 0.7 1 20 1059 1078 1059 1080 0.94

Sequence Information

Coding Sequence
ATGAAACTCCTATTTATCAAGTACCTTCCCGAATGCTTTACGCCAATCATTACCATAAACGAAGGAGAAGCAGATCCCCCCTTACCTAATTTGCGACTCAGAAGGTCGAAACGTAatattgacgctaaaaaagaGATCGAAAGCGTTgctaacaaaatcaaagaagaaGACAGTGCGGAAATTCTCTTGGAACCCGTCGAGGTCAAGACGGAAGTTCTAGACGACGATCAGACCGACGAGCAAACGTTTAAGTGCCGTATCTGCAAGAACAACAAACCGATGCCCCTATACGAATTTAAGGCCCATTATAAATCGTTGCATAAGGACAAGAGATTACCGAGGGCTGCGAGGACGCCGTTGGTGATGCATTCTTGCGATATCTGCGcgaaaaatttcaaatctatAAGGAACCTGAACGAGCACATGGAGACCCATAACAACCAATACGATTGCGAGGAGTGCAACGAAAGTTTTAAGAAGATCCTCCCGTACACTCTGCATAAAAGGATCCATTCTCTGGACGACTTATTCCGCTGTATTTTCTGCGATTACTCCACCGAACACGTGAACGATATCACCAGTCATTTGAGCATGAAGCACGAGACAAACCATCGATATATATGCAAGATATGCAACAAGGGATTTGACGTATTAACATGGTTCAAGGAGCACGATAATTTCCACAGCGGAACTAAACCGTTCAAATGCGGATATTGCGGTAAAACCTTCCTATACTCCAGATACCTTTCCGCTCACAAGAACAGCATGCATAAGGAGGAAATGACCGGCGTGTCTAGCATCCACGAATGCGTGATCTGCAAGAAGCAATACCAGCACAAGAACAGTCTCAAATTGCACATGAACGTGCATACGGGGAATTTCGCTATCTGCGATATCTGCGGGAAACAACTCTCCAGTAAGGAGAAATTAAAGTTCCATCTGAGGATTCATACGGGTTATAAGCCGTTCAAATGCAGTTACTGCGAAAAATGCTTCACGAAAAAGCCGATTTTAGTCGAGCATGAACGAATTCATACCGGAGAAAGACCGTATGATTGTGACTACTGTCATAAGGCATTCTCCCAGCGTTCCAGTCTAGTAATCCATATCCGCACCCACACCGGTGAAAAACCTTACATCTGTCACGTTTGCAACAAAGGCTTCGTCGCTAGGGCAATGCTGAATATCCACTTCAAAACTTGCAAAGAAGATGAGTTGGTAGACCATGAAGATGTCAAACCGAACCTTTCAGAGGCCGCACATCTAGTAAAGGTGGAAGATGTAATAATCTTCAAGGAAGCTATTGACGATCAAGTTTTTAGTAATAGCGAAGACGACAATCACATCCCGCAGCagaaattgttgaaaaagaATTCGTCTAGGGAGGAAAGCATAGTTTGTTCCGAATGCGGGAAATTGGTTAGGTATCGTCATTACGATAAGCACATAAAGTCTCATCGGTACAAATGCAAGCAATGCCCGGAGACTTTCGGCACTGAAAGGGCCTACGAGGCTCACGTCCAAGTTCACAGCAATAATTCTTTTACGTGTTCCACTTGCAACATAGATTTCGGCAACGCTGTCGCTTTTTCGATCCACAACCAGAAACATTCCGGTTTTGGCGTTTATAAGTGTCCTTTGTGCCCCTTCGAGACTTCCACAAAGACTTCTATGAAGCCGCACATCAAGCTGATGCACATGAAGGAGTACAAAAGGGTGTGCGAGATCTGCGGCAAGGGCTTCCTCAACAACGCCACCTACACGGACCATAAGACCCTCCACTTAGGCGAGAAGAAGTATGAATGCGAATTCTGTGATAAGAAATTCGTCTTGAATAGGTATTTGGACATCCACAAGAAATTGAATCACAAAGATATAATAAACGGGGTCGAGGAATATTACGCGTGTCACGTCTGCAACAGGACCTTCAAGTTCGAAAAAAGCCTTATTAGACATCTAAGTTGCATCCACGATATTGGAGCGAGCAAGAGAGTACCTTGTCCCATTTGTAATAAGGTAATCGCCAATAATTACGGCCTGAAGATCCATATGAGGACGCATAGCGGCGAGAAGCCTTATAGTTGCGAGCTATGCGATGCGAAATTCGCTAGGACGAAGTACCTACAGAGGCACATGGCCAAACATATGAAGTACGAACTAAAATATTCGGATATCATATCAAAAGTAACAGTAGAGTTAAACGATAGGAAACCGTCGAGAAGCAGGCTGTTCAGAAACCGATCGAAGCCGAACAGTACCGAGAAGAAATGGCCGTGCAAGAAATGTAGCGAACGCTTCTCAACCGTCCGCCAATTGAGGAAGCATCGGAAAGAGACGCATCCGAGGAACGTCAACATTAACCGCTACAGTTTCTCGTACAACCAACCGGAGGGCATCTATTCCTGTAATAATTGCGCTAAAAAATCGCGATGCCAGGAGGAGATGGAAGAGCACGTTCAAACTCACGAACCTTACGTGTGCTCGATTTGCGACTGCGAGTTTTTCTCGTTGTATAAATTCTCGGTGCACAATCAGAGCCACGATAGTACCTACTTCAAATGTCCGCTATGCGATTACCAAACAGCCAGAAAGACGGCGATATTAAGACATATAAACACGAACCATTTGAATAAGTACATCTATAATTGCAATATCTGCGGTAAGGGTTTCGAGGACGCCGCGAACTTTAGGGACCATCAGAATCGTCACGCTGGCGCGAAAGCGTTCGCGTGCATCGTTTGCCAGAAGGAGTTCCCGTTCAATAGATACCTTTTAGCGCATCAGAAGAGGAACCACATGGTCACGATTGATGGGGTCCTATTGCCTAACCAGTGCGGTGTTTGCAAGAGGATCTTATCTAAACCTTCTAATCTAGAGAAGCATATGATACAACATGACGCGGCTTTCTTACAGGCGACGCATCACCTATGCGATATCTGTGGGAAAGGTTTCGCGAGGAAAGACAAATTACGACTTCACTATAGGATGCACACTGGAATCAAGCCCTATAAATGCAGTTATTGTACGAAGTCTTTCGCTAAAAGGGAATATTTGATAATGCACGAACGGATTCATAGCGGTGAAAAACCTTTCGGTTGCCAATACTGCGGTAAGGCCTTTAATCAGAGGACCTCGCTGAAGACCCATATCAGGGGTCACACGGGCGAAAGACCCTACGTCTGCCATATCTGCAAGACCGGCTTTATTTCTAAGAATTCACTCAATTTGCACTTTAAAGCTTGCAACGGTTAA
Protein Sequence
MKLLFIKYLPECFTPIITINEGEADPPLPNLRLRRSKRNIDAKKEIESVANKIKEEDSAEILLEPVEVKTEVLDDDQTDEQTFKCRICKNNKPMPLYEFKAHYKSLHKDKRLPRAARTPLVMHSCDICAKNFKSIRNLNEHMETHNNQYDCEECNESFKKILPYTLHKRIHSLDDLFRCIFCDYSTEHVNDITSHLSMKHETNHRYICKICNKGFDVLTWFKEHDNFHSGTKPFKCGYCGKTFLYSRYLSAHKNSMHKEEMTGVSSIHECVICKKQYQHKNSLKLHMNVHTGNFAICDICGKQLSSKEKLKFHLRIHTGYKPFKCSYCEKCFTKKPILVEHERIHTGERPYDCDYCHKAFSQRSSLVIHIRTHTGEKPYICHVCNKGFVARAMLNIHFKTCKEDELVDHEDVKPNLSEAAHLVKVEDVIIFKEAIDDQVFSNSEDDNHIPQQKLLKKNSSREESIVCSECGKLVRYRHYDKHIKSHRYKCKQCPETFGTERAYEAHVQVHSNNSFTCSTCNIDFGNAVAFSIHNQKHSGFGVYKCPLCPFETSTKTSMKPHIKLMHMKEYKRVCEICGKGFLNNATYTDHKTLHLGEKKYECEFCDKKFVLNRYLDIHKKLNHKDIINGVEEYYACHVCNRTFKFEKSLIRHLSCIHDIGASKRVPCPICNKVIANNYGLKIHMRTHSGEKPYSCELCDAKFARTKYLQRHMAKHMKYELKYSDIISKVTVELNDRKPSRSRLFRNRSKPNSTEKKWPCKKCSERFSTVRQLRKHRKETHPRNVNINRYSFSYNQPEGIYSCNNCAKKSRCQEEMEEHVQTHEPYVCSICDCEFFSLYKFSVHNQSHDSTYFKCPLCDYQTARKTAILRHINTNHLNKYIYNCNICGKGFEDAANFRDHQNRHAGAKAFACIVCQKEFPFNRYLLAHQKRNHMVTIDGVLLPNQCGVCKRILSKPSNLEKHMIQHDAAFLQATHHLCDICGKGFARKDKLRLHYRMHTGIKPYKCSYCTKSFAKREYLIMHERIHSGEKPFGCQYCGKAFNQRTSLKTHIRGHTGERPYVCHICKTGFISKNSLNLHFKACNG*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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