Basic Information

Insect: Trypoxylus dichotomus
Gene Symbol: -
Assembly: GCA_014905495.1
Location: BNES01000033.1:485932-514264[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 0.00029 0.026 15.4 0.8 2 23 134 155 133 155 0.96

2 31 0.00016 0.014 16.2 1.8 1 23 161 183 161 183 0.96

3 31 0.00045 0.04 14.8 1.8 1 23 188 210 188 210 0.98

4 31 0.00025 0.023 15.6 0.8 1 23 216 239 216 239 0.96

5 31 0.0077 0.68 11.0 0.4 1 23 244 266 244 266 0.98

6 31 0.00042 0.037 14.9 1.5 1 23 274 296 274 296 0.96

7 31 0.0052 0.47 11.5 1.1 1 23 301 323 301 323 0.96

8 31 3.5e-07 3.1e-05 24.6 0.3 1 23 329 352 329 352 0.98

9 31 0.0032 0.28 12.2 5.8 1 23 357 379 357 379 0.99

10 31 0.0022 0.2 12.7 0.4 1 23 386 409 386 409 0.97

11 31 2.5e-05 0.0023 18.8 3.1 1 23 671 693 671 693 0.98

12 31 0.02 1.8 9.6 6.1 1 21 699 719 699 721 0.93

13 31 2.5e-06 0.00022 21.9 5.7 1 23 726 748 726 748 0.99

14 31 0.0051 0.45 11.5 0.3 3 23 756 777 754 777 0.96

15 31 0.0013 0.11 13.4 0.2 1 23 782 804 782 804 0.96

16 31 0.02 1.8 9.6 4.1 1 23 814 836 814 836 0.97

17 31 3.3e-09 3e-07 31.0 2.2 1 23 842 864 842 864 0.98

18 31 1.1e-07 9.7e-06 26.2 0.7 1 23 870 892 870 892 0.98

19 31 6.8e-06 0.00061 20.6 0.2 1 21 898 918 898 919 0.96

20 31 0.0075 0.67 11.0 0.2 2 22 1001 1021 1000 1022 0.85

21 31 0.32 28 5.9 4.6 1 23 1028 1050 1028 1050 0.97

22 31 0.0068 0.61 11.1 2.6 1 23 1056 1078 1056 1078 0.90

23 31 0.00031 0.028 15.3 3.4 1 23 1084 1107 1084 1107 0.98

24 31 6.6e-05 0.0059 17.5 3.7 1 23 1119 1142 1119 1142 0.96

25 31 1 90 4.3 0.4 3 23 1154 1174 1153 1174 0.94

26 31 0.0012 0.1 13.5 0.3 1 23 1180 1202 1180 1202 0.97

27 31 1.9e-06 0.00017 22.3 0.8 1 23 1208 1230 1208 1230 0.99

28 31 0.0014 0.12 13.3 0.5 3 23 1345 1365 1344 1365 0.99

29 31 1.7e-05 0.0015 19.3 0.6 1 23 1371 1393 1371 1393 0.98

30 31 0.00012 0.01 16.7 1.1 1 23 1399 1421 1399 1421 0.98

31 31 0.0064 0.57 11.2 0.3 1 21 1427 1447 1427 1448 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	0.00029	0.026	15.4	0.8	2	23	134	155	133	155	0.96
2	31	0.00016	0.014	16.2	1.8	1	23	161	183	161	183	0.96
3	31	0.00045	0.04	14.8	1.8	1	23	188	210	188	210	0.98
4	31	0.00025	0.023	15.6	0.8	1	23	216	239	216	239	0.96
5	31	0.0077	0.68	11.0	0.4	1	23	244	266	244	266	0.98
6	31	0.00042	0.037	14.9	1.5	1	23	274	296	274	296	0.96
7	31	0.0052	0.47	11.5	1.1	1	23	301	323	301	323	0.96
8	31	3.5e-07	3.1e-05	24.6	0.3	1	23	329	352	329	352	0.98
9	31	0.0032	0.28	12.2	5.8	1	23	357	379	357	379	0.99
10	31	0.0022	0.2	12.7	0.4	1	23	386	409	386	409	0.97
11	31	2.5e-05	0.0023	18.8	3.1	1	23	671	693	671	693	0.98
12	31	0.02	1.8	9.6	6.1	1	21	699	719	699	721	0.93
13	31	2.5e-06	0.00022	21.9	5.7	1	23	726	748	726	748	0.99
14	31	0.0051	0.45	11.5	0.3	3	23	756	777	754	777	0.96
15	31	0.0013	0.11	13.4	0.2	1	23	782	804	782	804	0.96
16	31	0.02	1.8	9.6	4.1	1	23	814	836	814	836	0.97
17	31	3.3e-09	3e-07	31.0	2.2	1	23	842	864	842	864	0.98
18	31	1.1e-07	9.7e-06	26.2	0.7	1	23	870	892	870	892	0.98
19	31	6.8e-06	0.00061	20.6	0.2	1	21	898	918	898	919	0.96
20	31	0.0075	0.67	11.0	0.2	2	22	1001	1021	1000	1022	0.85
21	31	0.32	28	5.9	4.6	1	23	1028	1050	1028	1050	0.97
22	31	0.0068	0.61	11.1	2.6	1	23	1056	1078	1056	1078	0.90
23	31	0.00031	0.028	15.3	3.4	1	23	1084	1107	1084	1107	0.98
24	31	6.6e-05	0.0059	17.5	3.7	1	23	1119	1142	1119	1142	0.96
25	31	1	90	4.3	0.4	3	23	1154	1174	1153	1174	0.94
26	31	0.0012	0.1	13.5	0.3	1	23	1180	1202	1180	1202	0.97
27	31	1.9e-06	0.00017	22.3	0.8	1	23	1208	1230	1208	1230	0.99
28	31	0.0014	0.12	13.3	0.5	3	23	1345	1365	1344	1365	0.99
29	31	1.7e-05	0.0015	19.3	0.6	1	23	1371	1393	1371	1393	0.98
30	31	0.00012	0.01	16.7	1.1	1	23	1399	1421	1399	1421	0.98
31	31	0.0064	0.57	11.2	0.3	1	21	1427	1447	1427	1448	0.95

Sequence Information

Coding Sequence: ATGAGAGATATTCAATATAATAGTAGGTGCAACGAGCCCTCAAACGATACAAGTCTGTATCCGAATATCGATACGACGATAGCCGACAACACAATCACGTTGATCGCCCAGACACCCAGTGGAAATTCCAAGAAATTAGTCGTCAAACTTTCGCAACTTACCCTCATCAAAAAGGAGGAATTTGAAGCGTCACTAACCGAGATCAAACAGGAGAGTTTCGTCCCGTTAATCCCTCCGATACCGTGCGAAGAAGATTCGAAAACTGGTGTCGATTTGAAAGTAACGAAAACTGAGAATAAAAATTTCGAATTCGACaggaaatatataattttagatCCATGCTTTAAGGAGCAAATCAAGGAGAAATACACGGAGGATAAAGAAACCGACACGACTTTGACGTGCGAGATTTGCTCGAAGCAATTTATAACGCTTTCGAGGTTCCAGAAACACATAATCTCGCATACCAACGATGACCAGCATACTTGTACTTTGTGCGGGAAAATATTTAGAAGCTCTTTGATGCTTCAAAAGCACGAAGTGACGCATAAGGTGACTAGATTTGTTTGCGAATATTGTAATAAAGAGTTAGCTTCCAAACACCAATTGGACATCCACACCAGACGGCATAAAGGGGAATATACCCATAAATGCGGCGAATGCGGTAAGGAATATTATAACATGAAAGCGCTTAGGCAACATATCGAATCGGAACATAAAGGAATTAGATACACTTGCTTAATTTGCGGATCGGTTCTTAAAAGTAGAAGATATTGGAGAGATCATATGGCCAAACACACTGATACCAATGTTAAAAGGTACCTATGCCAAGTCTGCAATAAATTCTACAGCAGCAAGCCCTCTTTAAACAGTCATAAGAAGATCCATACCGAAGAACGCTACGAGTGCAACGTTTGTGGGAAAAAGTCGACGCAGAAGTCCGCCCATCTGGTGCACGTGAGGCTGCACACCGGCGAAAAGAATTTCGTATGCGAGATCTGCGGAAAGAACTTCGCGAGGAAAGATATGTTGCAGATCCACAGAAGGAGGGTTCACGAACTGTCGAAATACCAATGCGATTATTGTCAGCAGCAATTCGAAACCGAACACCAACTCTTAACCCACTACCATACGCACGAGGAGGTCCAGAAGAACTTCCCGTGCGAATTTTGCCCGAAAAAATTCATCGATATCAACTTCCTCCGAAGCCACGTCAACAAGATCCACGTCGAAAACAAGACGGATGATTTGACCGGTCTACGGTCTCGAAGGTTTCGGAAACGCGACGAGAAAATTAGATGCTTGAGTTGCGATGAATTCCTGTTAAAATCGCAAGTGAAATCGCATTCTTGCGCCGGTAAAATGGAAGCGATTGAACACAAGGCCCTGATTGACTATAGCTTCGAAAAGTTCGAAGACGTCGTACCCTTCGAATATAACACGCACAATGAAATCAGTAATTGCGTGGTTGATGGGGATATCATGTACGAATTTAAGGATGACGTTATCAATACCGATGGAATGGTAGAAGTTTGCATTGCCAATGATGGTGTGGATGGTTTTGGGGATGTTGCTAAAGTATTGTATCAAGAAAACGTATACACAGACTTCAACTACCAACAAGGAGACATTGTTTCCCAAGTTGAAGATCCGATTCAATCGAAATATTACCTAATGATGAAGAACGCTCCCGATTTACCCGACAATAACTTGCTAGAGAACGCCGTAGCTCAACTGAACGATCCTGATGCGGATCTATTGAACCTTCTAGTCGCAGAGGACGATATCTTGCGAGACATAACGGAAAACGAGCAATTCGAGCAATTAATTAACAACACCGTCATAGGTAATGGAACTGAGTATAGTATGGAAGGTGGGGTTTTACCAGAAAACATTGGGGAATTGataaaaatcaaagaaaacgatATATCCGAGATCTGCGATGAAGTTACGAGCGTGAAGACGATACAAGAGTTTAGCGTGTCGAAGCAAATTGAAGATTCGAACGAATTCAAGTGTAATTATTGCGAGAAAGTATGTCCGACGAAGAAGCTACTAAAGAACCACTTAATGATCCATACGGGTTCAAGACCTTTCTCCTGCGATGTTTGTAAGAAGACTTTCAGGCATAACTATGAGGTTACCGTTCATAAGAAGTGCCATAATCAACCTTCATTCCAATGTGATATCTGCTCCAAGATGTTTATCCATAAATCGCATCTCACAGCTCATAGGAGGAAGCATCTCGGTGACTTCGCTGTGATATGCGATCTTTGCGACAAGGGTTTCTTAACGCAATCGAGTTACAGTCAGCATATTAAGGTTAAACACGACAAGGTAATGCATGTTTGCGAGATTTGCGGTGCTAAATTAAGCACTTTATCTGCACTGAAAGAGCATAAACTAATACATCAACCGGATTACCACGAAAAACGAAGCCACGTCTGCGAGTTTTGCGGAAAAAGTTATTTAAGCGTAAGACATCTGCGCAGTCATCTCAAATCTCATACGGAAAGCAACGATTTCTCTTGCAATATTTGCGGGAAGAGCTTTACGACCAAATCGAATTTACGCAAGCATATTACTACTCATAATGACGGTAAAGCTTTCGAATGTAATTACTGCGGAAAAGGGTTTAGTTCTAAGGAAAATTTAATGGTCCATAAGAGGATTCATACTGGGGATAAACCTTTTAGCTGCAGCATTTGTGGTAAGGCGTTTTCGCAAAAAATATCGTTAACTGTTCACACGAGATTAAGACGCGGCAGGCGGAAACAGAAGACGAACACGTTAGAATCGTACACTAGCAATAGCAATTCCACGAACGACCTCGATGTTGAAATAAAATGCGAACCCGTGGAGGATTGTAGGAATACGGACGAGGACGATGAGGTTACGTTGAAAAATAACGATCCCGAGGATGACGAGAATCTACTGACGAGATTGCAACGTTTACGGGACAAAGAGAAAGCGACCAAGATGAAATCCACCGAAGCTATCCAATGCGAAGTCTGCGATAAGACGTTTAAGAATAGCCTTGATTTCGGAATGCATTCGATAGCCCATAGTACCGACAAGAAGTACCATTGTTTCATGTGTAAGTATAGTAGTGGATCCTTGTACCATTTCGAGATGCATATCAGAGCCCACCAGGGGAATACTAAATATAAATGCAAGATTTGCAACAAAGCGTTCACTGTTAGTACTCACGCCGCGGAACATAAATACTTCCATACGGGAGAGAAGCCGTTTCAATGCGAGATTTGCGGGAAACACTTCATGTTCTCGTGGTTCCTAACCTCGCATCGGAGATCGCAGCATTGGGAGATAATGACCGGCACTCCTTTGGTCAAATACGATTGCACCGTGTGCAACAAACATTATACCTCATCTTCCGGCCTAAAACGACACCAAACCAGCAAGCATTTCGGCGCGGAGAAGACCGAGGTGTCTGTCTTGTGTGACGTCTGCGGGAAAAGGCTCGCAAGCATGGAGAAGTTAAAATTCCACAATCGGATTCATACTGGTTATAAGCCTTTCGCCTGTGCCTTCTGCGCGAAGGCCTTTTCACGGAAGGAACAGGTTAAGGAGCACGAGAGGGTGCACACCGGCGAGAAGCCCTACGTTTGCAAATTTTGTGGGAAGGGTTTCACGCAGAGGAGTCCTTTGAGGATACATGAAAGGACCCATACGGGTGAAAGACCTTATACGTGCAGGTTCTACGCTCGACGTTCCAAACCAACACCAAAATCCAAAGAAACGCAAGCTGCTTTCATTTCACCTTTCCAGATTAAAGGATATAAAGGAAATACCCCGTTCAAAAACGAAGCTCATTATAAAgcgaataatactgaagaaaCAGATCCGCTTCAGATTAAAATCGAAGTAGTAGACGTTGAACCTACTGAGGTTATAATGGAACCGTTGGAGGTGCCCACGTctagaaggaagaagaaaagcAACCCGCCGACTAAAGCCCCGAAAAAGCCACCAATCTCTAACGAACAATACCTGGTGGATATTAGTCCGCTGTGCGATATCTGCGGGAAAAGACTTGCCAGTTTGGAGAGACTAAAGCTGCATCGTAGGACTCATACCGGTGATAAGCCTTATGTTTGTACCTTTTGCGCTAAGGCCTTTTCCAGAAGAGAGCAGCTAAAGGAGCATGAAAGGGTGCATACAGGCGAGAAACCTTATATTTGCAGTTTTTGCGGGAAAGGTTTCTCTCAGCGGACGCCGATGAGGACCCACGAAAGGACCCATACAGGTGAAAAACCTTACGCATGCAGGATATGCAGTAAACAGTTTATATCCAAAGGCACAATGGACAATCATATGAAAAGTTGTGACGGATAG
Protein Sequence: MRDIQYNSRCNEPSNDTSLYPNIDTTIADNTITLIAQTPSGNSKKLVVKLSQLTLIKKEEFEASLTEIKQESFVPLIPPIPCEEDSKTGVDLKVTKTENKNFEFDRKYIILDPCFKEQIKEKYTEDKETDTTLTCEICSKQFITLSRFQKHIISHTNDDQHTCTLCGKIFRSSLMLQKHEVTHKVTRFVCEYCNKELASKHQLDIHTRRHKGEYTHKCGECGKEYYNMKALRQHIESEHKGIRYTCLICGSVLKSRRYWRDHMAKHTDTNVKRYLCQVCNKFYSSKPSLNSHKKIHTEERYECNVCGKKSTQKSAHLVHVRLHTGEKNFVCEICGKNFARKDMLQIHRRRVHELSKYQCDYCQQQFETEHQLLTHYHTHEEVQKNFPCEFCPKKFIDINFLRSHVNKIHVENKTDDLTGLRSRRFRKRDEKIRCLSCDEFLLKSQVKSHSCAGKMEAIEHKALIDYSFEKFEDVVPFEYNTHNEISNCVVDGDIMYEFKDDVINTDGMVEVCIANDGVDGFGDVAKVLYQENVYTDFNYQQGDIVSQVEDPIQSKYYLMMKNAPDLPDNNLLENAVAQLNDPDADLLNLLVAEDDILRDITENEQFEQLINNTVIGNGTEYSMEGGVLPENIGELIKIKENDISEICDEVTSVKTIQEFSVSKQIEDSNEFKCNYCEKVCPTKKLLKNHLMIHTGSRPFSCDVCKKTFRHNYEVTVHKKCHNQPSFQCDICSKMFIHKSHLTAHRRKHLGDFAVICDLCDKGFLTQSSYSQHIKVKHDKVMHVCEICGAKLSTLSALKEHKLIHQPDYHEKRSHVCEFCGKSYLSVRHLRSHLKSHTESNDFSCNICGKSFTTKSNLRKHITTHNDGKAFECNYCGKGFSSKENLMVHKRIHTGDKPFSCSICGKAFSQKISLTVHTRLRRGRRKQKTNTLESYTSNSNSTNDLDVEIKCEPVEDCRNTDEDDEVTLKNNDPEDDENLLTRLQRLRDKEKATKMKSTEAIQCEVCDKTFKNSLDFGMHSIAHSTDKKYHCFMCKYSSGSLYHFEMHIRAHQGNTKYKCKICNKAFTVSTHAAEHKYFHTGEKPFQCEICGKHFMFSWFLTSHRRSQHWEIMTGTPLVKYDCTVCNKHYTSSSGLKRHQTSKHFGAEKTEVSVLCDVCGKRLASMEKLKFHNRIHTGYKPFACAFCAKAFSRKEQVKEHERVHTGEKPYVCKFCGKGFTQRSPLRIHERTHTGERPYTCRFYARRSKPTPKSKETQAAFISPFQIKGYKGNTPFKNEAHYKANNTEETDPLQIKIEVVDVEPTEVIMEPLEVPTSRRKKKSNPPTKAPKKPPISNEQYLVDISPLCDICGKRLASLERLKLHRRTHTGDKPYVCTFCAKAFSRREQLKEHERVHTGEKPYICSFCGKGFSQRTPMRTHERTHTGEKPYACRICSKQFISKGTMDNHMKSCDG*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -