Tdic020186.1
Basic Information
- Insect
- Trypoxylus dichotomus
- Gene Symbol
- SMARCC2
- Assembly
- GCA_014905495.1
- Location
- BNES01000116.1:3377112-3381191[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-14 1.2e-11 44.9 0.1 3 44 595 636 593 638 0.95
Sequence Information
- Coding Sequence
- atgatcgCTTATGGACCTAAAAAGGATGGTAGTCcgaatacgaaatattttgaatcaCCAGAAACACTAAACTCACTTGAAACAGTAAAACAATGGTTGCAAAAGACAGTAAAGAAGtacataCAATCAGATCCTCCCACAAACAAAAGTTTATCGTCATTAATCATtcaattattacaatttcaagAAGACAGCCtcggaaaaaatattcaaaaaccaCCGATGACAAGAATACCTGTCCGTTTCTTTATGGACATGAAAGCTAATGGTGCCTTGTGCCACATGCTTGCGACAGCTTACAAATATAAGTTTGAGCAGGGATGGAAAAAATTTGAAACGCAAGTAGCTAAAaaCGTAGCCCGACTAGACAGAATTGTGGAGATGTTCCAGGCCATGGAAAAATCCCTAGTACAAAACAAACTGTACACATTACCAATAATCTATGTAAAATCTGAAGTTGACAGAAATCTAGCGATAAAACTAAAGGAGATCATACGCAAACGAAATGGACAAGTTGTCGACTCAGAAGAGCTAGCGACACATATTTTGTATCCACATTGTGATCCTCTTGAGGAAGAATATGCTAGACCATGGCTGAGGCGCGAAAAAATGATCATGATGCATTGGTATTACTTTCCCGACTCTTATGATACTTATGTAAGCGTTGAAGGGACACTTGAAGGCCTCCAGGTTGAACCCAGTTCACCGCATTCGGGGCCTTGGAGGGTCTCTTCGACTTGGCTATTAGATTCAGATCAATATAATGAGTGGATGACAGAGGAGGATTATGAAGTTGACGATATGGGGCAAAAAAAAGTGCATAGGATGAGAATGTCTGTTGAAGATTTAATGAATCCATCAGGGGATCTTGATAGAAAgaaaaagaacaaaaggaaACGTTCACCAAGTCCGCCATTAAAAAATACTGGTAAACGTAAAAGCGGAAGGAGCCCTGCTACTTGTAAAAAATCTCGTCCGGAAGATGCTGAATCTGAAGATCTAACTAAAGACATGGAGGAACCTACAGTAGAACCTAATATCACCGAAGTAAGTCCCGCAACACCGATCCCTGCAGGTCAACCCACCAAAAAGGACCACGAACTGCAACCGTTGAAAGGCGGCTCAATAACCGACTTAGATGAAACCGAGGAACGGGGCGAAGACTCCCAAACGGGCAAAAATAGCGACAGCAACACTCAGGAGGATGGCCAAGAGGATAACGTTACGGAACAGACCCACCACATCATTGTCCCATCGTACTCCTCGTGGTTCGATTACAATTCGATCCACGAGATTGAAAAGCGCGCTCTAGCAGAATTCTTTAATGGTAGGAACAAATCGAAGACACCAGAAATTTATTTAGCATATAGGAACTTCATGGTGGACACCTACCGTTTAAATCCCACGGAATACATCACAAGCACGGCTTGTCGTAGAAATCTAGCGGGGGATGTTTGTGCGATTATGCGCGTTCATGCGTTTTTAGAACAATGGGGTTTAATTAATTACCAAGTTGATACAGATTCGCGTCCGACACCGATCGGGCCGCCCCCAACGTCACATTTCCATATCCTGTGCGATACGCCTTCGGGTTTGCAGCCCATCAACCCGCCTAAAACATCACAGCCAAGCGCTGCTaagacattattagatttaGATCGTGTCCAAGATATCAAGAAGGCCGAGGGACCGGAACCGATTTCAGGTTTTGGTTTGAAATTAGATCAGTATGCTAAGAAACCGGCCGCTTTACGTAACAAGAGCGCCGCTTCCTTGACCAGAGATTGGACCGAGCAAGAGACCCTACTCCTATTGGAAGGGTTAGAAATGTACAAGGATGACTGGAATAAAGTGTGCGAACACGTCGGTTCGCGAACTCAAGACGAATGTATTTTGCATTTCTTGAGATTACCAATCGAAGATCCATATTTGGAAGATCCTGAAGCTGGCGGCGCTTTAGGTCCCTTAGCATATCAACCTATACCATTTAGTAAAGCAGGTAACCCGATAATGTCTACAGTAGCTTTTTTGGCATCCATTGTCGATCCTAGAGTCGCGGCTGCTGCAGCTAAATCGGCAATGAACGAATTTGCGAGTATAAAAGATGAGGTACCAACATCTATTATGGACGCACATCTTAAAAATGTCGAAGCTTCATCGACCGATGGTAAATTTGACCCTTCAGCCGGTCTCGCTTTATCGGGAATTGCAGGAACCGTACCCGAAAAGGAAGAAGAGGATAAAGTTAAAAAGGAAGTAGATAAAGACGATGATAAGTCTCACGACTCATCGGATTCGAAGAAGAACGGAATAGAGGGTACTGACGATAAGTCCATGGATAAAACGGCGATGAAAGCCGAACCAATGGATACCGATAAAGACGAGAAGATGGACACATCTGAGATAAAAGCTGATAAAGTAATTAGGGATAGCGAGATGCAAAGCGCTGCCGCTGCTGCTCTAGCAGCAGCGGCAGTTAAGGCAAAACATTTGGCCGCTGTAGAAGAGCGGAAAATTAAATCCCTGGTTGCTTTGTTAGTTGAGACTCAGATGAAAAAGTTGGAAATTAAATTGAGGCATTTTGAAGAGTTAGAGACTACCATGGAAAGAGAAAGGGAAGGTTTGGAATATCAAAGGCAACAATTGATAACTGAAAGACAACAATTCCATTTAGAACAGTTGAAAGCTGCTGAATTTCGCGCCCGTCAGCAAGCCCATCAGCGATTGCAAGCCGAGCAGGGCCAGTGGGCTCAACAGCAATCGTTAGTTTCGCACTCAACGGCCTCTACTGAGAGTGGTCCTAGCACTACGCCCACTCCTCCATCCCCACAAGCTTCAGCTGTCGCGTCGCCCGCTTCGTCTCACCATATTTGA
- Protein Sequence
- MIAYGPKKDGSPNTKYFESPETLNSLETVKQWLQKTVKKYIQSDPPTNKSLSSLIIQLLQFQEDSLGKNIQKPPMTRIPVRFFMDMKANGALCHMLATAYKYKFEQGWKKFETQVAKNVARLDRIVEMFQAMEKSLVQNKLYTLPIIYVKSEVDRNLAIKLKEIIRKRNGQVVDSEELATHILYPHCDPLEEEYARPWLRREKMIMMHWYYFPDSYDTYVSVEGTLEGLQVEPSSPHSGPWRVSSTWLLDSDQYNEWMTEEDYEVDDMGQKKVHRMRMSVEDLMNPSGDLDRKKKNKRKRSPSPPLKNTGKRKSGRSPATCKKSRPEDAESEDLTKDMEEPTVEPNITEVSPATPIPAGQPTKKDHELQPLKGGSITDLDETEERGEDSQTGKNSDSNTQEDGQEDNVTEQTHHIIVPSYSSWFDYNSIHEIEKRALAEFFNGRNKSKTPEIYLAYRNFMVDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDTDSRPTPIGPPPTSHFHILCDTPSGLQPINPPKTSQPSAAKTLLDLDRVQDIKKAEGPEPISGFGLKLDQYAKKPAALRNKSAASLTRDWTEQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDPEAGGALGPLAYQPIPFSKAGNPIMSTVAFLASIVDPRVAAAAAKSAMNEFASIKDEVPTSIMDAHLKNVEASSTDGKFDPSAGLALSGIAGTVPEKEEEDKVKKEVDKDDDKSHDSSDSKKNGIEGTDDKSMDKTAMKAEPMDTDKDEKMDTSEIKADKVIRDSEMQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLQAEQGQWAQQQSLVSHSTASTESGPSTTPTPPSPQASAVASPASSHHI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00399040;
- 90% Identity
- iTF_01120803; iTF_01123658; iTF_00307822; iTF_00956240; iTF_00627128; iTF_01252768; iTF_00067949; iTF_00434000;
- 80% Identity
- -