Basic Information

Gene Symbol
-
Assembly
GCA_014905495.1
Location
BNES01000012.1:27079332-27082886[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.67 6.4e+02 1.0 0.0 3 16 199 212 198 214 0.91
2 6 3.4 3.2e+03 -1.2 0.1 35 46 294 305 280 305 0.85
3 6 7.9e-09 7.6e-06 26.4 0.2 1 44 311 356 311 358 0.90
4 6 4.1e-09 3.9e-06 27.3 0.0 1 45 364 412 364 413 0.95
5 6 1.5e-07 0.00014 22.3 0.0 1 46 420 465 420 465 0.98
6 6 0.00012 0.12 13.0 0.1 2 44 473 516 473 518 0.90

Sequence Information

Coding Sequence
atGGATGAAGAAATTGATGACATTAAAAAGCTAGATGCTATTATAATGGAAGAACATGACCACAACACTTTTAGAGATGAATTTGATGATTTTATAGACCACCCAATAAGCGATGATGAGcaACTAGAGGGTGTTGACGAAGAAGAATTAACTGAAATCGAGGGTGTCGTTGACAATATAGTGAACAAACTAGATAACAACATATACCACaatgttgaaaatttaaattttagtgctGACTTAAATTTGGTAAAGCGTTTCTTAAGCttagaagaaattaaagttATAAATGTTTGTAGAGATATAAAATTGAAGagactattaattttaaatcgtGCCAAACATGTACAACTTCAGAATATAAGATATAAATTATACGAATTACTGAGAGAGTGTAAAATGTCACTGAAAGCTGTTgaaattcaaatagaaaaatctaAAAGGCAAGGAACACAGTCTGCAAAAAGCATAATCCCAAAACTGGGTCAtccatattttaaaacaaaagatttttATTCTTGTGCACCGAATGCTGATActatacgaaaacaaaaaagtaaagaaatttgcATAGACTATTTACCACAATTGTCTAGATGGACTGTGGAGGATCAAGTTATTTTAAGGAGAGCAATAATATTCAACTATAACACCTACTCAATCGACAAACTtgaatcaaatttaaaagttttggaaGCAAGCAAAAAAGTTTCTTCTAGTGTTGAAACTGTGAATGATGTAGAAGCAAAAGTATtgagtattaaagaaaaattggttgatttaaaaacaaattctgATCATGTACCACCCCCATTGGATACTGATGTTGAGATTGATTGGTTAAACATCTCCAAATGTGACTTGGATAatCGGCATTTACCAGAAGCATGCAAGgcattttggaatatttatttgCATCCTTCTATAAATAAAGAAGATTGGACGGAAGCGGAAAACAAGCAAATTGTAAATCTtgcgaaaaaatataattttcaaaattgggAACAGATagcaaaagaattgaataacaaCAGAAGTGGATTTGTTGTCTGTGTACACTATAATACAAGTTTATCTGAGAGAATTAGAAGAGACAAATTTGATCCCGAAGAAGATCGGTTTTTAATAGATGTAGTAAATTCTTGTCGTATAGGAAATTATATTCCATGGTCTAAAGTTAgccattattttcaaaatagatcACGATCACAATTATATCatagatatagatataatcTAGAGTACACAGACATAAAAAAAGGGCCATTTGATCAAGCTGAAGATGTacttctttctcttttggtaCGTAAATTTGGAAGGGATTACTACAGATGTAGTAAATACATACCACATAGAGCCCCAACACAACTAGCGCAtcgatatataaattatttagcatTTGACCACATAGATTTGGGCAGTTACACATTGGAAGATGATGAAATCATTATGGATCACGCTAAACATTATGGTGAAAAGGGATGgtctaaattatttacaatttttagaaGGAAAAATAGGACGCATTTGAGACAAagatatttctatttaaagaaATGGTTAGCCACTCACCCCGAGAAGAAGTTAAAGGATCTTCCGCGAAAATCAAGATATAAAAGAACGTTAGATAATAGATGGGCAGTTAGCTCGTGTATAGACCATTTTTCAACATCACCGGAACTGCCGTCATTGTACGAGATAAATGATTATTTAAGAAAGTTGGATACcaaatcaatttcattaattCGGCATCAACCAGTAACTTACCATCCCCCAAGTGCAAACATTGATAAAAAGCTAATAGAATACTTTCAAAGTACATGTAAAATTAGAACAAGTAAAATGATATCTGGATCGGAGTTGAATCATATCGTTGatattattaaatcattaatggCAGTATTAGATGTCGAGTTTGTTGTACCCAACGTTGAATTGCTACATGAAAATCAAAACTTAGATATTTTAGATGTGGAAATACTTACTTTACTATTTTCGGATGTTTCTAGTAgagaaaataaatgcatattacCATCAACATCTATTAAAACGAGTTCCACTCCATTAGTCCAAACACTTGACTTCGAAGGTCATGAAAAACAGCTTCTCAAATTTTATCAACCTGACGTAATTTCTTATTTACCTCCCAATATAAACTCTTTAGTTGGTATaagaagtttattattattacatcaatCTTATAAGTCAAAATATACAACAAAGAAACAGGTTACAAACTTAAATATAAAAGCAGAAGCAATCGATAGTCTTGATGAGGTGCAAAATGTTGTAACAGACAAGGAAAGATTTTACACaagatttaattcaatttttaaatggTCTGCAGTAATGTCAATAGTAAAGCCAAAAGAAACTTTATTCGTAAATAAGTCTGTTAAAAAAGTAGGTCCTTCTATCGTAGAACCTCCAAAAGTAGGACGGCCAAAAAAAAATTTGATCAAGATAGAACTTATGAATCGAGCAAGAAtgaagaataaaaaattatctagCGCAAAAGCTCCAAAAGTAGGACAGTCAAAAAAGAAACCAGCATCAAATATGCCGCAGACTACTGAAGTCTCTGAAAATACTATACATACATCAACCAATCAGAGTATAATACAAGGCAATAAAAGCGTGGCAAGTGTGAAACCGAGTGATACTGTTAAGCGATCCGTTGACGATGAGATAGAAAGTGTTTGcagtaagaaaataaaaacagaagcTAGTAATGGTAATAATGAATTGACGCAACTACGTGGCGATATAGATAAATTAGACAATGTCTTAAGGATGGAAATGAATAAGCCAGTCACAGTGGTTGAACGTAGTGATATTCTTttgtaa
Protein Sequence
MDEEIDDIKKLDAIIMEEHDHNTFRDEFDDFIDHPISDDEQLEGVDEEELTEIEGVVDNIVNKLDNNIYHNVENLNFSADLNLVKRFLSLEEIKVINVCRDIKLKRLLILNRAKHVQLQNIRYKLYELLRECKMSLKAVEIQIEKSKRQGTQSAKSIIPKLGHPYFKTKDFYSCAPNADTIRKQKSKEICIDYLPQLSRWTVEDQVILRRAIIFNYNTYSIDKLESNLKVLEASKKVSSSVETVNDVEAKVLSIKEKLVDLKTNSDHVPPPLDTDVEIDWLNISKCDLDNRHLPEACKAFWNIYLHPSINKEDWTEAENKQIVNLAKKYNFQNWEQIAKELNNNRSGFVVCVHYNTSLSERIRRDKFDPEEDRFLIDVVNSCRIGNYIPWSKVSHYFQNRSRSQLYHRYRYNLEYTDIKKGPFDQAEDVLLSLLVRKFGRDYYRCSKYIPHRAPTQLAHRYINYLAFDHIDLGSYTLEDDEIIMDHAKHYGEKGWSKLFTIFRRKNRTHLRQRYFYLKKWLATHPEKKLKDLPRKSRYKRTLDNRWAVSSCIDHFSTSPELPSLYEINDYLRKLDTKSISLIRHQPVTYHPPSANIDKKLIEYFQSTCKIRTSKMISGSELNHIVDIIKSLMAVLDVEFVVPNVELLHENQNLDILDVEILTLLFSDVSSRENKCILPSTSIKTSSTPLVQTLDFEGHEKQLLKFYQPDVISYLPPNINSLVGIRSLLLLHQSYKSKYTTKKQVTNLNIKAEAIDSLDEVQNVVTDKERFYTRFNSIFKWSAVMSIVKPKETLFVNKSVKKVGPSIVEPPKVGRPKKNLIKIELMNRARMKNKKLSSAKAPKVGQSKKKPASNMPQTTEVSENTIHTSTNQSIIQGNKSVASVKPSDTVKRSVDDEIESVCSKKIKTEASNGNNELTQLRGDIDKLDNVLRMEMNKPVTVVERSDILL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-