Tatt001467.1
Basic Information
- Insect
- Trypoxylon attenuatum
- Gene Symbol
- pnr
- Assembly
- GCA_963989405.1
- Location
- OZ022488.1:13848498-13852260[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-18 1.4e-14 53.5 3.2 1 34 255 287 255 289 0.97 2 2 9.4e-19 2.1e-15 56.2 6.2 1 35 314 347 314 348 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGGGGTGGAAGCAGTGGGTACGGTGCAGCTTCCGAGTACCAACAACAGTctcaacaacagcagcagcaacagcagcaacagcaacagcagcaacaacaacagcagcagcagcagcagcagcagcaacagcagcagcacggACAACAGCTGCAGACCCCGGTTTACGTTCCTTCCTCGAGACCGGCGATTCCGTCCGCAACCACGGCCGCCCAGTATCATTCCTTCCCCGGTTCCGCTTCGCCCGTGTGGGAGAAGAGCACCGCATCTTGGCAGCATGGTGTCGAGACGTACGCGGCTCATCACGCACTCGCGGGCCACGCGACAGGATccgcggcagcagcagcagcagctgcgGCAGCCGCTGCGGCGATACCACCGCATACCGCGGCACACGCGACCCATGGTCATCCGCATACGCACCCTCACTCTCACCCACATCCCCATAGCCATGCACATCCCCATACGCACAGCCATACTCATCCCCATAGCCATGGACACGCACACGGCCATGGTCATGGACATGGACACGGCCACGGACACGCGCATGCCCATCCGCACCCTCACGCGGCTCATCCGCACACCGCTCATCCGCACTCGAGCTTGGcagccgcggccgcagccgCCGCTGCTCCCTTCTACGCTGCTCAAAACGTCGCAATGATGTCGTCCTGGCGAGCCTACGACAGCGCTGGATTTCAGCGAGCATCCCCTTACGACACGGCGATGGACTTTCAATTTGGTGAGGGCCGCGAGTGCGTCAACTGCGGCGCCATATCGACGCCACTTTGGCGACGAGACGGAACGGGGCATTACCTTTGCAATGCCTGCGGTCTCTACCACAAGATGAACGGAATGAACCGACCACTGATCAAGCCGTCGAAACGCCTGATTTCCGAATTTCAGACGGCAACCAGACGGCTTGGACTTTGCTGCACGAATTGTGGTACTCGTACCACCACCCTTTGGAGGCGCAACAACGAGGGTGAGCCCGTCTGCAATGCTTGCGGCCTCTACTTCAAGCTTCACGGCGTTAACCGGCCCTTGGCGATGCGAAAGGACGGAATACAAACGCGCAAGCGAAAACCGAAGAAAACGCCGGAACCGAGCCAGAGCAGACCCGCCACGGCCCACGATCACGAGAGTACCCCCTCGACCGCCTCCTCTCCCTCAGCAGATCTGAAGAACAGTCAGTCGTCGCAGTctcagcagcaacagcagcagcagccacaacaacagcagcaacagcaacagcagcagcagcaacaaatCGAGGGATCAAAATCATCCTCGAACCCTACGTCGTCGGGAGATCGGCCAGTCTACCTGGGGCACACGTCTCTATTGGCGAGTGGCAGCATGACCACCGTGAAAACGGAACCTCGAAGCTGCGACGGGATCCTCTCGCAAGGCTACTCCGCTTACTATCAACATCCGCATCAGATCGGCACGTCGAATAGCGAGCACCAACAGCAGGCCTACTACTCGAGTCAGGAGGCACCTTACCATCATCAGCATCACGTAACCGCCGCAGCAAAATTGCTCGCTTCCTCCTAA
- Protein Sequence
- MFHGGGSSGYGAASEYQQQSQQQQQQQQQQQQQQQQQQQQQQQQQQQQHGQQLQTPVYVPSSRPAIPSATTAAQYHSFPGSASPVWEKSTASWQHGVETYAAHHALAGHATGSAAAAAAAAAAAAAIPPHTAAHATHGHPHTHPHSHPHPHSHAHPHTHSHTHPHSHGHAHGHGHGHGHGHGHAHAHPHPHAAHPHTAHPHSSLAAAAAAAAAPFYAAQNVAMMSSWRAYDSAGFQRASPYDTAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLISEFQTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEPSQSRPATAHDHESTPSTASSPSADLKNSQSSQSQQQQQQQPQQQQQQQQQQQQQIEGSKSSSNPTSSGDRPVYLGHTSLLASGSMTTVKTEPRSCDGILSQGYSAYYQHPHQIGTSNSEHQQQAYYSSQEAPYHHQHHVTAAAKLLASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -