Basic Information

Insect: Trypoxylon attenuatum
Gene Symbol: -
Assembly: GCA_963989405.1
Location: OZ022491.1:3165575-3173070[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.8 1.7e+02 3.1 0.2 1 23 167 192 167 192 0.94

2 16 2.1 2e+02 2.9 1.6 3 23 206 226 205 227 0.86

3 16 5.1 4.8e+02 1.7 3.7 1 23 233 255 233 255 0.97

4 16 0.032 3 8.6 0.5 2 23 261 282 260 282 0.97

5 16 0.0023 0.22 12.2 2.3 2 21 562 581 561 581 0.95

6 16 2.1 2e+02 2.9 1.0 1 23 650 672 650 672 0.82

7 16 3.8 3.6e+02 2.1 0.2 3 23 896 916 894 916 0.93

8 16 0.0043 0.4 11.4 0.3 1 23 924 946 924 946 0.98

9 16 0.07 6.6 7.5 2.4 2 23 1050 1071 1049 1071 0.96

10 16 0.19 18 6.2 0.8 3 23 1083 1103 1081 1103 0.95

11 16 0.00087 0.082 13.5 0.4 1 23 1180 1202 1180 1202 0.98

12 16 0.033 3.1 8.5 0.3 1 23 1279 1301 1279 1301 0.97

13 16 4.8e-05 0.0045 17.5 0.6 1 23 1307 1329 1307 1329 0.97

14 16 0.005 0.47 11.2 2.6 1 23 1379 1401 1379 1401 0.97

15 16 0.00081 0.076 13.6 1.7 1 23 1407 1429 1407 1429 0.99

16 16 0.21 19 6.1 2.3 2 23 1527 1548 1526 1548 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.8	1.7e+02	3.1	0.2	1	23	167	192	167	192	0.94
2	16	2.1	2e+02	2.9	1.6	3	23	206	226	205	227	0.86
3	16	5.1	4.8e+02	1.7	3.7	1	23	233	255	233	255	0.97
4	16	0.032	3	8.6	0.5	2	23	261	282	260	282	0.97
5	16	0.0023	0.22	12.2	2.3	2	21	562	581	561	581	0.95
6	16	2.1	2e+02	2.9	1.0	1	23	650	672	650	672	0.82
7	16	3.8	3.6e+02	2.1	0.2	3	23	896	916	894	916	0.93
8	16	0.0043	0.4	11.4	0.3	1	23	924	946	924	946	0.98
9	16	0.07	6.6	7.5	2.4	2	23	1050	1071	1049	1071	0.96
10	16	0.19	18	6.2	0.8	3	23	1083	1103	1081	1103	0.95
11	16	0.00087	0.082	13.5	0.4	1	23	1180	1202	1180	1202	0.98
12	16	0.033	3.1	8.5	0.3	1	23	1279	1301	1279	1301	0.97
13	16	4.8e-05	0.0045	17.5	0.6	1	23	1307	1329	1307	1329	0.97
14	16	0.005	0.47	11.2	2.6	1	23	1379	1401	1379	1401	0.97
15	16	0.00081	0.076	13.6	1.7	1	23	1407	1429	1407	1429	0.99
16	16	0.21	19	6.1	2.3	2	23	1527	1548	1526	1548	0.97

Sequence Information

Coding Sequence: ATGTCAGGAAGGATACCCCGCTTGCGGGCACTTCGTCCCCGggcgcagcagcagcagcagataCAACAGCATCAGCAGCAACCGCGCCTCAGAGCAGACGTGCCGCACAAAGAAGGTAACCTTAAAGAGAATCAGGAGGTCGCACTGGTTATGAAGGCCTACGAAGATGGTGATGACGATgctgacgacgatgacgacaaGAACGATAACAATGATCACGATGACGCAAACCCCGACGAGAACGAAAACGAAAACGAAAACACGAACGAAAACGCGAACGAGGACGAGAATGAGAACGACAACGCGAACGAGAATGAGAACgcgaacgagaacgagaacggaAACGGAAACGcaggaaacgaggaaaatgagagaaatgaGGGAGTGTGCGATGATATTAAGAGGAAGACAGTCGCTGTTCGCGCGAGGTCCGCGACTGGGAAACCAAATCTTGAGAATGACGCGGACGATGTCAGGATTCCCGAGAGCACCCCAAATTATCAGTGCAAAACGTGCAAACCTCCGAAACCTCTGGCAAATCTCAAGGCGTACCTCGAGCACCTCAAGAAGGAACACAAGCAAAAGGGTAAATTCATGAGGAACGGTGGAAAGCATTGCCCTGCCTGTACGTACGTGGCGCTTAATTCCAGAGACTTAGAGACTCATCAGCGAGTACATCATCTGAAGAGGAGGTTCTTCAGGTGCGCCAAGTGTTCCTATGTCACTCATGTACGGGCACGGTATACAAAACACGTTAAATATCATTCCATGCCAATGATCAAATGCGATGCCTGTGATTTTCGTACTCCCTACAAGTGGAACTTAGATAGACATACCCGAAATCACGGTGGTGGAGGAATATTTCAGTGTTGTGCATGTAGTTTCACTGCTGATATCCGGCAGAGTATGACAGTGCACGAGACGAATCACCACGAGCCACCTGTAAGTCAGGGAAATCGTAAGGGTAGTGCCCCATTCGAGCGTAAGCCACGAAACAGTCCGAAACGTTACAATCAGGTAGGAGCGAGCGATTTTCGGGATACATTGAATATGTCTGGAAGTAGTACCGCGTCCGCCAGTACCGGTGACGCCTTCCTCTCGGACCAGTCGATGGACGAGAAGAGGAGCGCGATCGCTAACGCCGAGTGTATAGCCCTCAAGTGCGAGGAGAAGGGTTGCCAATTTATTACTGCCTGGGATTCGGAGATGCAACGGCACCTGGCCGAATGTCACGCACCTCTAACACCGAACAAATCTCGCAAACCACTGCCGATGCTAATTCCCCTAAGTCCGATGGGCCTCAAGCGAAAGAACAATTCGTATAGTAGTCCCCCGGCGACGTTACTCAAAGTTCCGCGCGTTCGGGTACGCCCGGAACTTGCACAGATCGCGCGAGATACGGAACTGGCGAAACTCTACGGCAGTAAAGAAGGTAGCACTGGCTCGCGGAAGGATCTGACTAATGCGGCCGGcatattcgagaaaaaaaatgccTCCTTCTTTGACAAATTGAAGGAAAAGCTTACGACAGCAACGTCGATTAGAAATGGAATGCCGGAGGTAGCAGTAAGTAGCGACAACCATCTGAAATGCTGGTGTACGTTTAAAGCTAGTAGCATGGAAGAGTTGGTTTGTCATAAACAAACGCATCACACGGCTCTGAGTGTGTCTGTGGGGGCGACGCGATGCCCGAAATGCAGGAGGCGTTGCAAAAGTTCGACAGATCTACAAGTACATATGCAATGTTGTCCCGCAAGTAGCAACAATCCATCTGCAGACAGTAGTTTAGAGAGAGTAACGAATTTTTCGGAGCTACGCATGAGCTCGTACCGTGGTGAATATGCATTCCCGTCGCACATGGATTGGGATATAAATGTCACTGGACTGAACTCCTCCTCCGGATCATCGGTTGATGGTGGCCCGACGCATCCGAGCGGCCGGAGGGTTTTTAAATGCCCGCATTGCCCATTTTGGGCATCCACGGCAAGCCGCTTTCATGTTCATATTGTCGGTCATTTAAATCGGAAGCCTTTCGAGTGTTCCCTGTGCGCGTACCGCTCTAACTGGCGATGGGACATCACAAAACATATTAAACTTAAAGCAGCCAAAGATCCAGTTCATATGACTGCAAGGGTACTTATGACGGATGAAACGGGTCGGCGGAATTATTCCAAGTATAACAAATATCTTGCACAGGTCGAGCATCAATCCTGGGAGGAACATAACACGGAGGAGCATAACGAGAGAGAACATATTAGTAATACCGAAGCGAATAAGATCGAAGAACTTTCGAGTAAACTGCTAATCGTAAATAACAAAGAGTACTCTCATACACCAGAGTTGACCGTGGCCCCAGTTTCGGTTTTGTCCTCGAGTGACGAGAACCGTAACGGCGGAGCCATAAATATTGGAGGGCTTAGGTCTCCGCCGCCATTGAAAGCGGCCTCTAGGAGCCGTGGTCAGTCGTTGCTGAAAAATAGCCCTGTGTCCTCTTATGCTTCCTCGAGCAGCACGATTTCGAACAGTTCTCTCTCTGTCACCGCCATGGACGATAGTAAACGTACACTGTGGAAGTGCAAACGGTGCAATTTCCGCGACGCTAATAAAGAAACTGTTGTGTTGCACGTCAAGTCTCATTACGAGTCAACCGAACAAGCTCAATCGCCAGCGAAGAATCTATTTGGCTGTGGCGATTGTCCATTTTCCGCTCCCGATGCAACGACCCTGTCTATGCATAGGGTGCATCATCGACCAAACTTGGAAGCCATCTTCAAGTGTTACCTATGTCCATACTACGTTAGCACAAAGGCCGATCTCTTGGATCATGTCCGCTTGCACGGAGAGGAGCTCGCGGTAGTACATCAACAAAATTCAGAACACTACGTTACTCCCCCGAAAGCAGGGACTCACGCTGACAGTAGTGCAAGTCGGTTGAAAGAAGAGAATGTATTGGAACAAGTGATTCATATAACAACCCCAAGCGGAGGATCAACTAGGTGTAGTACGCCAAAGGGTCAAACCGACCCGCCACCTCCTCCCCCGTCTCagcctcctcctccacccccaTTGCTCTTGGATACCCGAGCTCTTCCGGAAGCCCCATTAGTTTGGGTATCAAAACCAGATGGCACTCTAGGAAAAATGCTGAAATGTCGTCACTGTCCATTCGTCTGTTCCCGACGGGCGGAAGTACGCGATCACGAAATTATGCACGTCGATGCTCCGAGCCAAGGGCCAGTGATCGCTTGTACGGACTGTAGTTTCACGTGTACCCGACGCGAGGTGATGATTGCACACACGGATATGCACGCAGGATCCCTAGGCAACGTACATTGTCTAGTTGACGATACAAGACCAGACGCCCAGCAATTGACGGATTTGACTACGCTGTTAGGTTTGAGCCAACCTCCAGTGCTAGCAGCCGATCCCGATCTGCGTGACTCGCGGTTGGTGCACTGTTGCGCAAAGTGCCCTGCGCGATTCCTTTGCGAGAAGGAACTTCGGATTCATCTGCGTTACCATTCGACGGAACTAGCTTATTCCTGCCAATGGTGTTCCTATGCTGCTCGCCAGCCGTCTCATCTCTTGGCTCATCAGAAAGCTCACTCAATGGAGTATCAGGAACGAACGAAACATTTGCTCTCGGTATACGGTCATTCGCAGAGATATCCTCCGCCGGCGACCGCTTGCGTGGAGGCAGCTAATCAAGACTCGGATGAATCTTCCATGCCAAGGGTCGCTTGGATCGTAGTTGAAGTTTCCGAAAGTTCGAGCCACACGTTCGGCGGTTCGATGAATCACTCGACAAACCGACAACCCACGACGAATCAAGTATTCACTTGTGCCAAATGCCCGGCACGATACTTCAAGTTAGACGCATTGGAATATCACATGACCCTACACGGATCTAACAACAGATTCAAGTGCACCGAATGCGATTATTCGTCAAAGACTGCTCAAAACCTGGTAAAGCATCAAGTCGTGCATCGTAGGCAGCCAGATTCTACGGACACGGAAATCACAGTGTCGAATGTCACTTCGACACCGGATCCACAATTTGGATTGTTTATGCGAGGAAATCCAAACTTTGTTTATCCGGGATATCTGAGAAACGGTCGATTAAAGGAGAAACGGTACAAGTGCCACAAGTGTCCGTCCGCCTTCGAGAAACGCGAGCAGTACCGGGTTCATCTGACGCTTCACGGTGCTAAGCAACGGTATCGTTGCGATACGTGCGATTACTCGGTTAAGTATTACGCGAATTATATTCAACATCTGAAAAAGCACCAGGCAAACGCGGAGGCACAGGCACAGCGAAGACAGTACGAGGACGATACCATCACGATTGATAGCGATACCATGGTCTCAGATGCCGGTCCAGTTGCCGTGACGACGCGCACAGGCAAGACCCTCAAATCGGCAAATGGTATGTCGAACACAATTGGACTGACGAATAACAGCGCAGGGGCCCTAAATTATGTCAGCGGTGCGCAAGCTTCCAATCAAGACAAACAATCGATGCTGCTGATGCAGAAGAAGGGATTGATACGCTCGCCTAGCGAGGAAGTCGAAACTCTGCGCTGTCAGAATTGTCCGTTTACGACGTGCGACAAGGAGGCAATGGACGTTCATAAGCGTCGCCACGGAATCGAGAGGATGACTCCATCTTGCCCTCACTGCGATTATATCCCGAGGAAAGATGAAAACGTAGGGGAACACATAAAACTCCACTTTACTAGACTATACAAACCTGATTCCTACTTGATAATAGAGCTGCTCACTTTGACCATGCGGAAGATCAGTGGGAataagaaagaggaaaaacagAAGCCTGAGGTGTTGTTTAAAGAGTATGCCGAAGGCCGGTTTCTTCCTCAGGCAGATACAAAGTCAGTGTCGTGCAGCATAAGTTCGTACAAAGAGAAAGTGATAGTGGATCCGAACACTGGAGAACCGAAGCAGCATGTTAAAGTGTGA
Protein Sequence: MSGRIPRLRALRPRAQQQQQIQQHQQQPRLRADVPHKEGNLKENQEVALVMKAYEDGDDDADDDDDKNDNNDHDDANPDENENENENTNENANEDENENDNANENENANENENGNGNAGNEENERNEGVCDDIKRKTVAVRARSATGKPNLENDADDVRIPESTPNYQCKTCKPPKPLANLKAYLEHLKKEHKQKGKFMRNGGKHCPACTYVALNSRDLETHQRVHHLKRRFFRCAKCSYVTHVRARYTKHVKYHSMPMIKCDACDFRTPYKWNLDRHTRNHGGGGIFQCCACSFTADIRQSMTVHETNHHEPPVSQGNRKGSAPFERKPRNSPKRYNQVGASDFRDTLNMSGSSTASASTGDAFLSDQSMDEKRSAIANAECIALKCEEKGCQFITAWDSEMQRHLAECHAPLTPNKSRKPLPMLIPLSPMGLKRKNNSYSSPPATLLKVPRVRVRPELAQIARDTELAKLYGSKEGSTGSRKDLTNAAGIFEKKNASFFDKLKEKLTTATSIRNGMPEVAVSSDNHLKCWCTFKASSMEELVCHKQTHHTALSVSVGATRCPKCRRRCKSSTDLQVHMQCCPASSNNPSADSSLERVTNFSELRMSSYRGEYAFPSHMDWDINVTGLNSSSGSSVDGGPTHPSGRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIKLKAAKDPVHMTARVLMTDETGRRNYSKYNKYLAQVEHQSWEEHNTEEHNEREHISNTEANKIEELSSKLLIVNNKEYSHTPELTVAPVSVLSSSDENRNGGAINIGGLRSPPPLKAASRSRGQSLLKNSPVSSYASSSSTISNSSLSVTAMDDSKRTLWKCKRCNFRDANKETVVLHVKSHYESTEQAQSPAKNLFGCGDCPFSAPDATTLSMHRVHHRPNLEAIFKCYLCPYYVSTKADLLDHVRLHGEELAVVHQQNSEHYVTPPKAGTHADSSASRLKEENVLEQVIHITTPSGGSTRCSTPKGQTDPPPPPPSQPPPPPPLLLDTRALPEAPLVWVSKPDGTLGKMLKCRHCPFVCSRRAEVRDHEIMHVDAPSQGPVIACTDCSFTCTRREVMIAHTDMHAGSLGNVHCLVDDTRPDAQQLTDLTTLLGLSQPPVLAADPDLRDSRLVHCCAKCPARFLCEKELRIHLRYHSTELAYSCQWCSYAARQPSHLLAHQKAHSMEYQERTKHLLSVYGHSQRYPPPATACVEAANQDSDESSMPRVAWIVVEVSESSSHTFGGSMNHSTNRQPTTNQVFTCAKCPARYFKLDALEYHMTLHGSNNRFKCTECDYSSKTAQNLVKHQVVHRRQPDSTDTEITVSNVTSTPDPQFGLFMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCDTCDYSVKYYANYIQHLKKHQANAEAQAQRRQYEDDTITIDSDTMVSDAGPVAVTTRTGKTLKSANGMSNTIGLTNNSAGALNYVSGAQASNQDKQSMLLMQKKGLIRSPSEEVETLRCQNCPFTTCDKEAMDVHKRRHGIERMTPSCPHCDYIPRKDENVGEHIKLHFTRLYKPDSYLIIELLTLTMRKISGNKKEEKQKPEVLFKEYAEGRFLPQADTKSVSCSISSYKEKVIVDPNTGEPKQHVKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -