Basic Information

Insect: Trypoxylon attenuatum
Gene Symbol: -
Assembly: GCA_963989405.1
Location: OZ022489.1:2528908-2534838[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 4.2 3.9e+02 1.9 0.1 1 12 130 141 130 150 0.83

2 22 0.00091 0.085 13.5 2.2 1 21 157 177 157 182 0.95

3 22 0.00043 0.04 14.5 3.4 1 23 189 212 189 212 0.92

4 22 0.00098 0.092 13.4 2.2 1 23 548 571 548 571 0.97

5 22 3.6 3.4e+02 2.1 0.1 5 23 578 597 577 597 0.93

6 22 0.0018 0.17 12.6 1.6 2 23 604 625 603 625 0.96

7 22 2.1 2e+02 2.9 4.6 1 19 652 670 652 673 0.89

8 22 0.0013 0.12 13.0 0.4 1 20 799 818 799 820 0.94

9 22 0.012 1.2 9.9 0.1 2 23 828 850 828 850 0.93

10 22 4.1 3.9e+02 2.0 5.3 1 22 859 880 859 882 0.87

11 22 0.3 28 5.6 0.1 2 19 906 923 905 924 0.93

12 22 0.15 14 6.5 4.5 1 23 933 956 933 956 0.96

13 22 0.0023 0.22 12.2 4.2 1 23 967 990 967 990 0.94

14 22 0.00036 0.034 14.7 0.1 1 19 1030 1048 1030 1050 0.96

15 22 0.29 27 5.6 3.5 1 23 1058 1081 1058 1081 0.90

16 22 1.5 1.4e+02 3.4 3.2 1 23 1090 1113 1090 1113 0.91

17 22 0.23 22 5.9 0.3 2 21 1161 1180 1160 1181 0.92

18 22 0.42 40 5.1 3.6 1 23 1188 1210 1188 1210 0.96

19 22 0.21 19 6.1 4.2 1 23 1220 1243 1220 1243 0.92

20 22 0.0064 0.6 10.8 0.2 2 21 1341 1360 1340 1361 0.93

21 22 3.3 3.1e+02 2.3 4.7 1 23 1368 1390 1368 1390 0.82

22 22 1.3 1.2e+02 3.6 1.9 1 16 1403 1418 1403 1426 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	4.2	3.9e+02	1.9	0.1	1	12	130	141	130	150	0.83
2	22	0.00091	0.085	13.5	2.2	1	21	157	177	157	182	0.95
3	22	0.00043	0.04	14.5	3.4	1	23	189	212	189	212	0.92
4	22	0.00098	0.092	13.4	2.2	1	23	548	571	548	571	0.97
5	22	3.6	3.4e+02	2.1	0.1	5	23	578	597	577	597	0.93
6	22	0.0018	0.17	12.6	1.6	2	23	604	625	603	625	0.96
7	22	2.1	2e+02	2.9	4.6	1	19	652	670	652	673	0.89
8	22	0.0013	0.12	13.0	0.4	1	20	799	818	799	820	0.94
9	22	0.012	1.2	9.9	0.1	2	23	828	850	828	850	0.93
10	22	4.1	3.9e+02	2.0	5.3	1	22	859	880	859	882	0.87
11	22	0.3	28	5.6	0.1	2	19	906	923	905	924	0.93
12	22	0.15	14	6.5	4.5	1	23	933	956	933	956	0.96
13	22	0.0023	0.22	12.2	4.2	1	23	967	990	967	990	0.94
14	22	0.00036	0.034	14.7	0.1	1	19	1030	1048	1030	1050	0.96
15	22	0.29	27	5.6	3.5	1	23	1058	1081	1058	1081	0.90
16	22	1.5	1.4e+02	3.4	3.2	1	23	1090	1113	1090	1113	0.91
17	22	0.23	22	5.9	0.3	2	21	1161	1180	1160	1181	0.92
18	22	0.42	40	5.1	3.6	1	23	1188	1210	1188	1210	0.96
19	22	0.21	19	6.1	4.2	1	23	1220	1243	1220	1243	0.92
20	22	0.0064	0.6	10.8	0.2	2	21	1341	1360	1340	1361	0.93
21	22	3.3	3.1e+02	2.3	4.7	1	23	1368	1390	1368	1390	0.82
22	22	1.3	1.2e+02	3.6	1.9	1	16	1403	1418	1403	1426	0.79

Sequence Information

Coding Sequence: ATGGCCAGAGTTCTAGTGTATGAGCGTTCCTTGGATACAATACAAACCGATCATGCAGCATCGTGCAGTTATACGTTTTCATTAGATAGAGTCAAAGAAGAGCCACCCGATCCAAGCGAAAATGAGGTGGCCGCTTCGTCAACGGTTAACCAAGAGACATCATCAAACCAATCTCCCAATAACcttttaaataataaagaaaatgaatacCTAACGAATAGGAAGCCTAAAAAGGCGAGAAGACGATACGATGAATACAGacgtcgaagaagaagagttaataaaaataaggaaaagaataaaaatttaagaAGTGGAAAAAATGCGAACAGTACACCGGAGAAAGTCATGGCGCGTCGAAAAAAGCAAGCTccgatgaaaatttcataCGAGTGTCCGATATGCTTTTTAGAATTCGATTATTTAACCGAGTCGCTGGAGCATGAACGTCTATATTCTCGTGCCTCGTATCAATGTACCAAGTGTGATGCGGAGTATATTAGGAAGTCCTCAATGCAACGTCACTTAATGTACTGTACAGGTCACCTTAAAAGCAGACATAAATTTGAATGCAATGTTTGTAATCACATGTTCACGACCAAGGCCTATTTGCAAGCTCATGTTTATCACACACATTATAACTTGTTTCGCGCGTCGAGTCCGCCGAAATCTGTCTCAACACCTTCTAAGCTTTCGCCAAACGCGTCTCAGTTCGGAATACCCGAGAAAAAAATACAGTTCGATGCCTCTCTGACTATCGCGACAGATTCTAAAAGCCCCTTCCGCAAAAATTTAACCCCGACACCACATTCACCTAGTAAAAAACTCCGTCAAACAACACTCATGGAATTCCTTCAGATCAGTAACAAGAATGGCGTGGAGGAAAGCTCACCAAAGAAATTGGTTGATCAGTTGGAAACAAAACAAACCAAATACAAATCTAACGAAGACAGTGGATGCTCAACTTCATCGGAATTGAAAGAGACTAATCCATTGGTTACGCCACAGCAAAGCGGAAGCAAGAGCTTAGTTGTGAACCCATCTTTCAGTGGCAGAACTACGCCGTTTGTTCAGATACACGCCGATCCCGAATTAATAATGAAGCTATTGGACATTAGTTCGACTTTGAAAGAGGAACCGCTTGATGATGTTTTACCTTGTGAGGATACGAACGCCCGACAAAACAGTCCCTACAGTCTCCGACCGAAAAGTTTGGCAGATGTGACTTATCATCATTTTCAGCGCGAGAAGAGTCATCGAAAACGGGAACACAGTGTGGTGTTTCCCGATTCTAATAAATCCTGTGATGGCTCACCAACTCAGCGACCAAAGAAGTTACAATTCAAAGAAGAATCAGAAAACTATCATAGTTTGATCAAAGAGTGTTCGGTACCTTTATTTCGATGTGATCACTTACTGAAGCCTCCTGCTAACACAACTGAGTCTCATCGAACGACGACGCCGGTATCTTGGACTAAGGAGGCCGACACATCAGTTGATTTAATAAACAATACCGATGATAATAGAAACCTTGAAAATATGGAGAATCGGTTACCAAAGTTAAATCGTAGTAATGACGAGAAAGTAGAAGCAAGTACCGCGACAGTTAGTAACAACGAATCTGACACTCGGAAAAAGTGCTACAGATGCAAAGTTTGTAGTCAACGATTCCCTCTGAGAAAGAGTTTATCTAAACACTTAAATTCCTATCATTCAATCTATATTTCCAGCATATGTAGCGCCAATTATTCTTCTAGACAGGAATTATTGTATCATTATCTATCGCAGCACACGATATTCAAGCGTACTACTTGCTGCGTATGCggagaaaaattcgagaatCGCTTTGGATTACAACAACACTTGCTGTTACATTGTATCAAGGTACTTTGGACTCAGAATGAGAATGCACCGGTTGACGTAAAAATGAATTGCAACGTTTATAAAAAGCAGCATAAGTGTCATCTATGCAAGAAGCGATTTTGGTTATCATCATGTTTGAAGCTACATTCAAGCGTCTGCTCTACAGGAAAGAAGACCGGAGAGTCCGGTGATCGGTCACGGCAAAAATTTATGTTGCGCAACAAGTCGAGATTATCAAACAGGCTAATAGCCCGTACAACTAAGCGCAAGAAAACAGAAGGTGCCGTTAGCAATATGGCAGCGTTGTCGAAATACAGAAGTCCCAATAAAACTGACCCTTCATCAGGTGGGACGGACCTTGGTATGGAACTTTGCGTCCCGCAAGAAGAAAGTAGAATACGAGATCCCGAAATTGTCTGGTTACCCGAAGCTGGCGATTTTTCCAAATCAAACACTAAATCAGATCTGAATGATTTGAAAGATACAATCACCACCAGTGCCGATAGCCGGGTGAGtgtggaaatgaaaaaatatgagTGTTCACTATGCGGTCGGAGTTTCGAAACAGTCGCTTCGTTCCACCGACATGAACAACTATATTCCAAACCGTTTGCGCGACAATGTGCAATATGTGGCACTGAATTCCCAACTGATCAGTTCTTGAAAGCCCACATCAGTGCGACACATAATCGGTCGCAGAGAAAGTATAGCTTTCAGTGTAAATTTTGCCACCAAGGTTTCGACAAAAAACAACGTTACTTGACACACGAAGCGCACTTGCACAATGATCAAATTGACACGATGCCGGTGCAGACTTGGTTGAATCCGGAACAAGTGTGGAATGTGAACACTATGTGTAGCATTTGTGACTTAATGTTCGGAACGTTCGATCAATTTATTATGCATAACGTGTACTATTATCAGGGTCACGTATTTACCTGTGGATTTTGTCGTGAAACTTTTAGCGGGATGTATATGCTTCATCATCACAGAAAGCTAGTTCATTACCCGGCAGAGACGCGAAAGTCTTATCCTTATGAATGCGACATATGCAAGGAGGGATTCAGTCGTGAGTCCCATTACCATGCGCACAAGTTACACGTCCATGTGAAGGAGTCGACCAAAGGTCATAACTCTGGGATTAATTTAGCTCAAGAAAGCCGGTCGTTGCTAGAAACTGATACCTCCGCGACGACGGAACCGAAACAAATTGCCCTAGGTATTTACGAGTGCACCGTTTGTCAACTGACCTTCACCAACGAGGATGATCTCGCGAGACACGAAACGGAATACAGCCTTCGAGGTCAACACAAATGTGACCAATGCAGTAAAAGTTATCCCACACAGGAGATTCTCTATCAACACCATAGCTTGAGTCATATGGGTCGCGATGTTCCGAATGACTACAAATGTCGGATTTGTGGAGAAATTCTTACCACTAGCATCGCGATGAAGTGTCACTTAAAACATTTCCATTCGTGGGTAATTGATCACACGTACAACAGCCTTCCCCTAGAGTCTACGCAGAAAAGTGTCAGCAGCATATCGAATCAAGATCAATGCAATGCTAAAGGTCTGCACGGATGTGGCAGAATAGAGCTCGTGGGGAATGGTGTCTCGTGTCGAACTTGTAAAACGGTTTTTGACAGTGGCATTAAGTTAAAGAAACATTTGTTACGGTACTCGAACATAGGAGAGCATGTTTGTGCCGTTTGTCATCGACGCTTTGTAGAGAAACAGCGTTTGGATTTACATAAAATGAAACACTCACGATTGAATGTTCTTCTTTCGCAACATCATTGTCCGATATGCCAAGAAGGATTTAAGGCTCTCAGTCACGTCCGGATACATGTGCTACATTATCACGGCTATGAAACCTTTCAGAACATTTTGGACAAACGCGGATGTTTTAAAATTAACCGTTCTTCCAATTGTGCAGGTAATTCTACATTGCAATCCAAACCAGATGTCGCTGCATCGATTTTGATCCTCGATGCTAACACCGCGTGCTATCTTTTTTTAGAAGGTGACAAACAACTAGGTACTTTACCGGTGGCATCGAATACCGGTTATACTGTGATTAAAGATCCAAATGTTTGTAAGGAGAAATTCTCATCTGTCGTTGCGGACGCGGATGAAGGGATTGCCAATAGTGTTTCCTGCCAGGTATGTAATGCGAAATTTAAAAATCGCAAATCTCTGGGTAAACATATCGCAAGGTTCTCAAATGTCGGCGAATATAAATGTAACATTTGTCATATGAGATTCCCATGGGAGAGCGTGTACACGCAACATTGTCGCAAACATATTAGCGTTACATGGAATACTGCTCCGTATTGGAAGTATTCTTGTTACTATTGCAGTGAAAGATTTCGTACCCTGAGAACTGCGCGATTTCATCTACTTCACATTCACAAGAATAATTTACAACAACAGATAATCAATGACACTGCAGAGCTTGGCAATAAGCAAGTTACGCAAGAAGTAAATGGGACACAAGATATCGTCCTGGATGATAAAAATCAGAATAACGTAAATTCAAGCGAACAATTGAACGATGAAACAAGTGCTGAACCTGATAAGTTGATAGCTGAGAATGGAAATGatgttttaattgtaaaagaaaTAGCCAATACGAATATGGCGAAGTATGTAATATTGGAGGGTGGGGGTTCAAAGATGAATAGTGACACTTCGAGCCGGTCACAAAAAGTACTTGATTCAACGAAGGAACCTGCAGCAAATCTTCGAAGATTTCATTGCTCGATCTGCTTGGTACGTTGTGTCGACCTAGAATCGTACTACTTCCACTATAATTCTGTTCACGGTAAAAATGCCAAGCCTTTAGTCGCTGGTACAATTCCAAAGCCGATGGTTATTATTAAGTGTATCATCTGTGACGGATGGTTTATAAATGAGATTACTCTTAAGAAACACGTAACCAAATATCACCCGAAATTCGCAGAAGCGATTGAAGCTGGGAAACAACATTGTGCGGAGAGTTTCTCAGGAACTGATTTTATGGAGATTCAAGCTTTAtag
Protein Sequence: MARVLVYERSLDTIQTDHAASCSYTFSLDRVKEEPPDPSENEVAASSTVNQETSSNQSPNNLLNNKENEYLTNRKPKKARRRYDEYRRRRRRVNKNKEKNKNLRSGKNANSTPEKVMARRKKQAPMKISYECPICFLEFDYLTESLEHERLYSRASYQCTKCDAEYIRKSSMQRHLMYCTGHLKSRHKFECNVCNHMFTTKAYLQAHVYHTHYNLFRASSPPKSVSTPSKLSPNASQFGIPEKKIQFDASLTIATDSKSPFRKNLTPTPHSPSKKLRQTTLMEFLQISNKNGVEESSPKKLVDQLETKQTKYKSNEDSGCSTSSELKETNPLVTPQQSGSKSLVVNPSFSGRTTPFVQIHADPELIMKLLDISSTLKEEPLDDVLPCEDTNARQNSPYSLRPKSLADVTYHHFQREKSHRKREHSVVFPDSNKSCDGSPTQRPKKLQFKEESENYHSLIKECSVPLFRCDHLLKPPANTTESHRTTTPVSWTKEADTSVDLINNTDDNRNLENMENRLPKLNRSNDEKVEASTATVSNNESDTRKKCYRCKVCSQRFPLRKSLSKHLNSYHSIYISSICSANYSSRQELLYHYLSQHTIFKRTTCCVCGEKFENRFGLQQHLLLHCIKVLWTQNENAPVDVKMNCNVYKKQHKCHLCKKRFWLSSCLKLHSSVCSTGKKTGESGDRSRQKFMLRNKSRLSNRLIARTTKRKKTEGAVSNMAALSKYRSPNKTDPSSGGTDLGMELCVPQEESRIRDPEIVWLPEAGDFSKSNTKSDLNDLKDTITTSADSRVSVEMKKYECSLCGRSFETVASFHRHEQLYSKPFARQCAICGTEFPTDQFLKAHISATHNRSQRKYSFQCKFCHQGFDKKQRYLTHEAHLHNDQIDTMPVQTWLNPEQVWNVNTMCSICDLMFGTFDQFIMHNVYYYQGHVFTCGFCRETFSGMYMLHHHRKLVHYPAETRKSYPYECDICKEGFSRESHYHAHKLHVHVKESTKGHNSGINLAQESRSLLETDTSATTEPKQIALGIYECTVCQLTFTNEDDLARHETEYSLRGQHKCDQCSKSYPTQEILYQHHSLSHMGRDVPNDYKCRICGEILTTSIAMKCHLKHFHSWVIDHTYNSLPLESTQKSVSSISNQDQCNAKGLHGCGRIELVGNGVSCRTCKTVFDSGIKLKKHLLRYSNIGEHVCAVCHRRFVEKQRLDLHKMKHSRLNVLLSQHHCPICQEGFKALSHVRIHVLHYHGYETFQNILDKRGCFKINRSSNCAGNSTLQSKPDVAASILILDANTACYLFLEGDKQLGTLPVASNTGYTVIKDPNVCKEKFSSVVADADEGIANSVSCQVCNAKFKNRKSLGKHIARFSNVGEYKCNICHMRFPWESVYTQHCRKHISVTWNTAPYWKYSCYYCSERFRTLRTARFHLLHIHKNNLQQQIINDTAELGNKQVTQEVNGTQDIVLDDKNQNNVNSSEQLNDETSAEPDKLIAENGNDVLIVKEIANTNMAKYVILEGGGSKMNSDTSSRSQKVLDSTKEPAANLRRFHCSICLVRCVDLESYYFHYNSVHGKNAKPLVAGTIPKPMVIIKCIICDGWFINEITLKKHVTKYHPKFAEAIEAGKQHCAESFSGTDFMEIQAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -