Basic Information

Insect: Trypoxylon attenuatum
Gene Symbol: -
Assembly: GCA_963989405.1
Location: OZ022490.1:32353139-32355974[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 7e-06 0.00066 20.1 2.5 2 23 528 550 527 550 0.94

2 7 4.9e-06 0.00046 20.6 0.3 1 23 561 583 561 583 0.98

3 7 1.8e-05 0.0016 18.9 2.3 1 23 589 611 589 611 0.97

4 7 0.0015 0.14 12.8 0.1 3 23 620 640 618 640 0.92

5 7 1e-05 0.00098 19.6 3.3 1 23 648 670 648 670 0.97

6 7 1.8e-07 1.7e-05 25.2 0.3 1 23 676 698 676 698 0.97

7 7 3.7e-05 0.0034 17.9 0.4 2 23 709 731 708 731 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	7e-06	0.00066	20.1	2.5	2	23	528	550	527	550	0.94
2	7	4.9e-06	0.00046	20.6	0.3	1	23	561	583	561	583	0.98
3	7	1.8e-05	0.0016	18.9	2.3	1	23	589	611	589	611	0.97
4	7	0.0015	0.14	12.8	0.1	3	23	620	640	618	640	0.92
5	7	1e-05	0.00098	19.6	3.3	1	23	648	670	648	670	0.97
6	7	1.8e-07	1.7e-05	25.2	0.3	1	23	676	698	676	698	0.97
7	7	3.7e-05	0.0034	17.9	0.4	2	23	709	731	708	731	0.95

Sequence Information

Coding Sequence: ATGGCTCAATCGTCGGACAGTATGGACATTGGAAGCGAAAAGGTGGTTTTGGAGGTATTGAAGCAAGCTATTGGAGACGAGACAGTCATATTTGACGCAGACGCCGCTGATCATCCAGAAGAGGGTGAAATAGAGGAGATTATAGAGATTATAGAGGAGGTTGAAGAGGTTGAGGAGGATCCTGAGAGGGAGGagcaggaagaagaggaacggCTGCAGGAacaagaggaggaggaacTCGAAGCGCAGGAAGAGGAAGTGGTACAGGAGGTACAAGAGGTAGAGGAGGTGGAAGAGGTGCAGGAAGTGGAAGAGCTAGAGGAGGTAGAGGAGTTAGAGGAGTTGGCAGAGGATGAGTCATCGCAGGACTACGACAGTAGTCCTCCGAACGCAAAGAGGTTGAAGACCACGTCCAACAGTAAGAATGTAGCGAATCCCCAACGAACGTCGCGCATGCTAAGGCAAGGCGTTTATACCATTCAGCACGAAAGCTCATCGCTGAAGGTCGTACGAGGGCACGAACGTGGGAATGGAACAGGTGAAAGGTATCGTCACCGTGACGACTCGGTGGGAACTAAGAGAAAGCAAGTTATAGCTTACGACGTTGACGAGGATTGGCAAGACGAGGAACTCGAACAGGCAGAGGACACTAGACAGGAGGAGGGTGACCTGGATGGAAGCTCCGATATATCGAACCACCAGCGTAACGAGACTTTGGAAGCGCAAGGAATATTGAGTGGAGATACAAAAAAATCCGTAAATAATCAAACAATTACGTATCTTTCGCGCGATAATAGAGTACTAGGGTGTAGAGAGAACGGGAAGCGTAAAGTAAGCcaagaatttggaaaaaatctaAATAACGCTGAGACAGTCGATAATAACGTAGATCAGGAAATTGTGAAAAACGACGAAAACAATTTGTTGTATACTGTTCTCGGATCAAAGAAATCTGCTTCGTCCGCAAGAACAGCACAGTCCGATGCACATTACGTTAAGATGGAACAACTTAACGAGAATACGATACCCATCGAAGGCACGATATATTACGAGAGAGATAACATGGAAACGCTGTACGTGGCACAGTCTGTCGACGAGAACGAAGAGTACCAATACGATAGCGCCTCCATGGAACCGGAGGATCAAACGTGGGAAGGAGTGAATTCGGACGCGACTCAGAAtcaggaagaagaaaactcTCAGGATCAGATATTTTTgcacgaagacgaagacggtCAGTTATACTTTAAGGACGATAACGGAGCTCTCCAACCAGTATATTTGACCGAGGATGGGAATTACGCGATAGCGGAGAACAGCGATGACCAAGATAGCAAAGAGTCGGAGAATCGTGGAAAATCCCAACAGGTCGGCAGATCCTCGGAGAGCAGTTCGATCGCTTTGTCAGATTCAGAATCAAAGTCTCAATCTCACGCTAACAAGCAGAACATCGTGGTCCCGACATCGGCCATCAATGATCTTGATAACGAGGACAACACGGTGACCATATCCCTTATAATTTCGGAGGACGAGCATGGGCAAAAGAGAACCCAAGTGATTATCCCAACGACCGACAACTTGAAATGCGATATTTGCAACAAAAGCTTCAAGACTTCATTTCAGTTGCTGAGGCATAACAGACTGAAGCATGCTCGCGAAGAAGACATCACAACCAGGAACTTTCCCTGCGACCTCTGTCCCAAAAGGTACCCGGATCAGAATTCTTTAGCCCGTCACAGAAAGACTCACACTGGTGACCGACCGTTTCAGTGCCTTGAATGCCATAAAAACTTTCCGACGTCGACCGCTCTGCGTCGGCACTTGACCCTACATAATTCTCAATCACGGCCTCTTCCATGCATTTATTGTGGACGACGTTTCGTCGAAAAAGAGAGCTTGGCCAAGCACGAACAGTCGCATTTGGCTGGTGATCAACGAACTCACACGTGCGACATATGTCACAAATCATTTTCGGATGCGGGCGATCTGAATCTACACAAAAAGTACCACGATGCAGACAGAAAGTTCGATTGCGAAGTTTGTGGACGAGAATTCAATCGATTGAACAATTTGCAAAGGCACATGATGGTTCATCAACAACAAGGGGCGAACGAGGAAATACTTTCTTGCGACGTCTGCGGTATCACGTATAAGTTCATGAGCTCCTTAACGAGGCACATGGTAACCACGCACATGAACCCAGAAAAATTGCGGCAACAAGCCGAAGAGCAgcgaagaaaacgagagaataaCTATCGACGATACTTGGAGAATCGAAAGATGTACGAAACTCAACAATCTGGTGCATATGGTACAAAACGTAGTTATCATCAAACTGCTTGA
Protein Sequence: MAQSSDSMDIGSEKVVLEVLKQAIGDETVIFDADAADHPEEGEIEEIIEIIEEVEEVEEDPEREEQEEEERLQEQEEEELEAQEEEVVQEVQEVEEVEEVQEVEELEEVEELEELAEDESSQDYDSSPPNAKRLKTTSNSKNVANPQRTSRMLRQGVYTIQHESSSLKVVRGHERGNGTGERYRHRDDSVGTKRKQVIAYDVDEDWQDEELEQAEDTRQEEGDLDGSSDISNHQRNETLEAQGILSGDTKKSVNNQTITYLSRDNRVLGCRENGKRKVSQEFGKNLNNAETVDNNVDQEIVKNDENNLLYTVLGSKKSASSARTAQSDAHYVKMEQLNENTIPIEGTIYYERDNMETLYVAQSVDENEEYQYDSASMEPEDQTWEGVNSDATQNQEEENSQDQIFLHEDEDGQLYFKDDNGALQPVYLTEDGNYAIAENSDDQDSKESENRGKSQQVGRSSESSSIALSDSESKSQSHANKQNIVVPTSAINDLDNEDNTVTISLIISEDEHGQKRTQVIIPTTDNLKCDICNKSFKTSFQLLRHNRLKHAREEDITTRNFPCDLCPKRYPDQNSLARHRKTHTGDRPFQCLECHKNFPTSTALRRHLTLHNSQSRPLPCIYCGRRFVEKESLAKHEQSHLAGDQRTHTCDICHKSFSDAGDLNLHKKYHDADRKFDCEVCGREFNRLNNLQRHMMVHQQQGANEEILSCDVCGITYKFMSSLTRHMVTTHMNPEKLRQQAEEQRRKRENNYRRYLENRKMYETQQSGAYGTKRSYHQTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -