Basic Information

Insect: Trypoxylon attenuatum
Gene Symbol: -
Assembly: GCA_963989405.1
Location: OZ022495.1:9298598-9303004[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.4 37 5.2 5.8 2 23 281 303 280 303 0.96

2 20 1.6 1.5e+02 3.3 2.2 1 23 353 375 353 375 0.97

3 20 0.00057 0.053 14.1 1.2 1 23 424 446 424 446 0.98

4 20 0.01 0.96 10.2 0.1 1 20 505 524 505 526 0.94

5 20 1.1 1e+02 3.8 2.8 1 23 538 561 538 561 0.91

6 20 0.01 0.97 10.2 0.2 2 23 567 588 566 588 0.95

7 20 0.00018 0.017 15.7 1.6 1 23 640 662 640 662 0.97

8 20 0.0001 0.0098 16.4 0.1 1 23 668 690 668 690 0.97

9 20 5.5e-05 0.0052 17.3 3.6 2 23 716 738 716 738 0.93

10 20 2.7e-06 0.00025 21.4 0.1 2 23 765 787 765 787 0.97

11 20 0.0097 0.91 10.2 0.2 2 23 796 817 796 817 0.94

12 20 0.026 2.5 8.9 0.1 1 20 868 887 868 887 0.97

13 20 0.00018 0.017 15.7 0.1 2 23 907 928 906 928 0.96

14 20 0.00016 0.015 15.9 0.8 2 23 943 964 942 964 0.96

15 20 3.5e-05 0.0033 17.9 2.2 1 23 986 1009 986 1009 0.96

16 20 0.13 12 6.7 0.1 2 23 1065 1087 1064 1087 0.95

17 20 0.0038 0.36 11.5 1.1 2 23 1154 1176 1153 1176 0.92

18 20 0.00074 0.07 13.8 0.2 1 23 1182 1206 1182 1206 0.97

19 20 0.0033 0.31 11.7 2.4 1 23 1211 1234 1211 1234 0.96

20 20 0.027 2.6 8.8 1.0 2 23 1264 1286 1263 1286 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.4	37	5.2	5.8	2	23	281	303	280	303	0.96
2	20	1.6	1.5e+02	3.3	2.2	1	23	353	375	353	375	0.97
3	20	0.00057	0.053	14.1	1.2	1	23	424	446	424	446	0.98
4	20	0.01	0.96	10.2	0.1	1	20	505	524	505	526	0.94
5	20	1.1	1e+02	3.8	2.8	1	23	538	561	538	561	0.91
6	20	0.01	0.97	10.2	0.2	2	23	567	588	566	588	0.95
7	20	0.00018	0.017	15.7	1.6	1	23	640	662	640	662	0.97
8	20	0.0001	0.0098	16.4	0.1	1	23	668	690	668	690	0.97
9	20	5.5e-05	0.0052	17.3	3.6	2	23	716	738	716	738	0.93
10	20	2.7e-06	0.00025	21.4	0.1	2	23	765	787	765	787	0.97
11	20	0.0097	0.91	10.2	0.2	2	23	796	817	796	817	0.94
12	20	0.026	2.5	8.9	0.1	1	20	868	887	868	887	0.97
13	20	0.00018	0.017	15.7	0.1	2	23	907	928	906	928	0.96
14	20	0.00016	0.015	15.9	0.8	2	23	943	964	942	964	0.96
15	20	3.5e-05	0.0033	17.9	2.2	1	23	986	1009	986	1009	0.96
16	20	0.13	12	6.7	0.1	2	23	1065	1087	1064	1087	0.95
17	20	0.0038	0.36	11.5	1.1	2	23	1154	1176	1153	1176	0.92
18	20	0.00074	0.07	13.8	0.2	1	23	1182	1206	1182	1206	0.97
19	20	0.0033	0.31	11.7	2.4	1	23	1211	1234	1211	1234	0.96
20	20	0.027	2.6	8.8	1.0	2	23	1264	1286	1263	1286	0.92

Sequence Information

Coding Sequence: ATGGACGAAGTCACCGAGCAGCAAAACTTGGAAAATGTATGCAGACTTTGCCTTTCTTCCGATGGACCTATGTCATCGGTCTTCGAAGGCCAAGATGCTCCAGTGTCTTTGGCCATTAAGATACAAGCCTGCGTCTCGATCCAGATTTCTGCTACGGATCGGCTGAGCACTCAAATTTGTGCGCAATGTGTCAAGAATGTAAATCAATGGCATACGTACAAGGAAACGTGTATGCATTCTCAGACCAAACTTCAGGAATGGTTGGATCAGCGTATATTATCCACTCCTATGGTGGTGACCATAAAGGATGAACCAGTGGATTTGGACTTCTGCGATGACAACGTCGAGGTGTTATCGGACACGCAGACATCGGGGGTCACGTCGGTACTTGTCAATGACGTTGTGTCGAACGATCGAGTGGAAGAGTTAATGGACGACGAAATAGAAGCCATTGAAACTGTGAAGGATTCTGGACCACCTCCATTAGTGACTTTAAGAGACTCCGAGAATGAAGAGCCTCCGGTAATTGTGGAAGAAACAAATAAGAATACGTCCGAGGTAATAAGTGATCAGCCACAAAAGGAAACCACCGAGGTAGAAAAACAAGTATGTGCAGAGCGAATAAAGTCAGAGCCACAAGAAGACGATGACGCGGATCATGCATTGGATACCGATTCTATTACGGGTACTGAACTTAGGTTGAATCTGTTAGCAAAGCGACAAGACGTAGTTATGGAAGCTGATTCAACGCAAAAGATGAATTCTACCGTAGGCAGTCCTAAGAAAAAGATTAAACGCGGCCCACATACACATTACAGAGGTACGCGTATTTTCAAGCAAAAGTGTAAATACTGTCAAATTAATTTGCATTCGAAACATTCTTACGCGAAACATATGGAACGGTTTCATACTTCGGAAAAGCCGAACAATTCTACTATGCCTCAATTACAAGACGAGGTAGAGTCTATCGAAGACATCGAGGATGAATTAGTTAGTATGGAAAACGACTCATCTTTGACTCAGGTTCAACAAAATATCATTGGTCAATTGAAAACATTTTCTTGTTACGCCTGTCAGCAAATCTTCCATGATCGAAGAGCTACTCTCAGTCATATTCGTCAACATATACCTGATTTACGGCCTTACACTTGCATCGCTTGTTTAACACAATTCCCCGATCGTTCTTTATACAAGTTGCATTGCTCTGCGTCATTTGAATGTGCTATGAAAATTGCATTGGTTATACCAAAACATGgcgaagagaaatatttcacgtGTAACATGTGTTCGCGTTCTCTACCTAATAAAAAAGAGTTGCTGAATCATCTTACGAAACATTCGGAGAAACAGTACGAGAAGCTTGTATCATCTCCAATGCGCTCGCCGCCAAAGCTCTCTCCAATGACATCTATACCACCATCTAAAACTAGTACTCCAACGAAGTCTTCTGTAAAAAGTGCTCTGTCCACTGTCATTGACGGTCCTTACAAAAATGGCGATCCTTTGTACAATCATGTATGTGACCTATGTGGCATGATTTACAGATACAAGCCTAACATGATTAAGCACAGAGAATTATGTGCACAATTGACTCCAGAAGCTCGAATTTCCTATAAATGTGTATATTGCAACATGACATTTTTGGTATATAGAAAGTTCCATAGTCACATTTCAGTGGATcacaaaaagaaagaattaatttgtGCTATTTGCAATGCTACGTTCACGGCATCTAGTGAATTTTTAGTTCATCATGCCATGCATCGAAAACTCAAAAGTATGAACAAGAGTGACTCGCAAGAGATAGGAATGGATAATGGTATGATATCGCCTTCTACTTTATCACGATCGGTTCAAGACTGGAATTCATTCGAGGCACAAATGAATTCTGGCAAGGTGGCAAATCTTAATTCACAGTACTGTTGTGCTTTGTGTAATAAGAACTTTGAAACGAGAGCAGAATTAACCGAGCACAGAAATATTCACCTAAAAGTGAAGATATATTCCTGTGTGATTTGTCGTAGCATGTTCAGCAGTGCTAGTGCATTGGAAGCTCATATGAAAGATCATGGTATAGAAGATCCAAATGAAAACTTGAACAGTATGAGTACAAGTACAGTATCGGATCCAGGTGTAAAACCGAACGAATGTCATATATGTCATAAAGTGTATTCGAATCAAGCAAATATGAAAAGACACATTTTCAATAATCACAAACCTGGACAACATACCAAGACCAGAGTTTCGGATATAAAGCCAGTGGAAATTCAGGATAAGAGAAAAAGGATGCGTCAGTGTTCATATTGTCCAAAGAGTTTCGTCTTCCCAGCGAATTTGAATCTCCACATGGCAACAGCCCACGGTCCAGAATCAGTAGGTGGTCGAAAATGTGATTTGTGTGATAAAGTGTTCCCGGAAGAGTTGTCATTAAAGATACACAAGACTTGGCATACGCGTAGCAAAATGCTAGGTAAATCACAATCGCTCGataagaaaccaaatatcatCGAGGGTCAAGTTGTACGGTCGACGAAATCTGACCGACCAGCAAGAGCTAAAAAATCATTTCCTAATGCACCACCTACCCAATCAGGTAACACTTTCCAATGTCAAGTATGCGACGATAAGTTCCCTGACGTAGCCGAACTTAGAAAGCATTTGTGGGATGTCCATTGCGCTAGGAATAAATCGGAGAAAGGTTTATCCGGTGATGAATTACAATGCGAACTTTGCACGAATGTCTTTCCTGATCGTGATACTCTCAAAGTCCACATGCAGTGGCACAAAGCTCATCCGATTCTTAGCGATATTCCCAAAAAGAAACTTCCTTGTGATGTCTGCGGGAAATTGTACAGTTCGAGGAAAACATTGTCCAGACATAAACGTCTTCACAAGCCTAATACTATCGCGTCGATTAAGTTCCAGTCAATAGCAAAGAAGCCAATGGCTAGTCAGTTCATGTGTACAGTATGTCGCAGAGTGTTTAGTAGCAATCAATCGTTACAGCGTCATAGAATGAATTTCCATGGCGATTCCTCTCATCGAACTCAACAGCAACAGCTTATAAATCATAACGCTACACATAAATCATCGCTTGACGAACCTAAACCGAAGAGAGTGAAACTCGAGGAGAATTCAATAAATCAGAAATTATACCTTCCTGTGGATAATAATGCTCGGAAGAAGCCTGTAACATGTTTGCTTTGCAAAACCGTGGTGCCCAACATGAGCTTGCTCTACAGGCATAAGCAGATTGTGCATAAGTTGTTCCTCGATAAGCAGTCTAAAGTGAATAAGTCTTATCAAGAAGTCCCTACGAGCAAACCTCATCAGTCAGTCTCTCTGAACAAGACTGTTGAACAAGTTTCCACGAGCAAGTCGAAGTCATCTTCCAGATTGGGACATGCGAAATCAAAAATCGAAGATGTAAAGCCAATGTTCACATCTGATGGTAGAGTATCATGTAACATCTGTTACAAATCATTTGCAATGGTTACCCATCTACGACAGCATTACGCTTTAAAACATAAGAACGCggataaatatatttgtaataCCGATGGCTGTAAACAATCCTTTGCAAATGCCATGCAACTCAAGGATCATGAATTGACACATACCTCTATGATCTACTGTTGTAACTTGTGTGATCGGCATGTGTTTACTAAAGCCGCATTATCCGAACATATGAGACTGGGACACAAAACTTCTTACGAAGTGACTTCTACCAAAAAGTTCCACAGGGAGACTAATTTACAAAATTACGTTGTTCCGGGAACAAACATGCAACAATGTCCCGTTTGTAACATTAAATATCCTAACAATCGCTCTATGAAGGTTCATTTCTTCAAGTTTCATGATAAATCCGGTTAG
Protein Sequence: MDEVTEQQNLENVCRLCLSSDGPMSSVFEGQDAPVSLAIKIQACVSIQISATDRLSTQICAQCVKNVNQWHTYKETCMHSQTKLQEWLDQRILSTPMVVTIKDEPVDLDFCDDNVEVLSDTQTSGVTSVLVNDVVSNDRVEELMDDEIEAIETVKDSGPPPLVTLRDSENEEPPVIVEETNKNTSEVISDQPQKETTEVEKQVCAERIKSEPQEDDDADHALDTDSITGTELRLNLLAKRQDVVMEADSTQKMNSTVGSPKKKIKRGPHTHYRGTRIFKQKCKYCQINLHSKHSYAKHMERFHTSEKPNNSTMPQLQDEVESIEDIEDELVSMENDSSLTQVQQNIIGQLKTFSCYACQQIFHDRRATLSHIRQHIPDLRPYTCIACLTQFPDRSLYKLHCSASFECAMKIALVIPKHGEEKYFTCNMCSRSLPNKKELLNHLTKHSEKQYEKLVSSPMRSPPKLSPMTSIPPSKTSTPTKSSVKSALSTVIDGPYKNGDPLYNHVCDLCGMIYRYKPNMIKHRELCAQLTPEARISYKCVYCNMTFLVYRKFHSHISVDHKKKELICAICNATFTASSEFLVHHAMHRKLKSMNKSDSQEIGMDNGMISPSTLSRSVQDWNSFEAQMNSGKVANLNSQYCCALCNKNFETRAELTEHRNIHLKVKIYSCVICRSMFSSASALEAHMKDHGIEDPNENLNSMSTSTVSDPGVKPNECHICHKVYSNQANMKRHIFNNHKPGQHTKTRVSDIKPVEIQDKRKRMRQCSYCPKSFVFPANLNLHMATAHGPESVGGRKCDLCDKVFPEELSLKIHKTWHTRSKMLGKSQSLDKKPNIIEGQVVRSTKSDRPARAKKSFPNAPPTQSGNTFQCQVCDDKFPDVAELRKHLWDVHCARNKSEKGLSGDELQCELCTNVFPDRDTLKVHMQWHKAHPILSDIPKKKLPCDVCGKLYSSRKTLSRHKRLHKPNTIASIKFQSIAKKPMASQFMCTVCRRVFSSNQSLQRHRMNFHGDSSHRTQQQQLINHNATHKSSLDEPKPKRVKLEENSINQKLYLPVDNNARKKPVTCLLCKTVVPNMSLLYRHKQIVHKLFLDKQSKVNKSYQEVPTSKPHQSVSLNKTVEQVSTSKSKSSSRLGHAKSKIEDVKPMFTSDGRVSCNICYKSFAMVTHLRQHYALKHKNADKYICNTDGCKQSFANAMQLKDHELTHTSMIYCCNLCDRHVFTKAALSEHMRLGHKTSYEVTSTKKFHRETNLQNYVVPGTNMQQCPVCNIKYPNNRSMKVHFFKFHDKSG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -