Basic Information

Insect: Trypoxylon attenuatum
Gene Symbol: -
Assembly: GCA_963989405.1
Location: OZ022488.1:13753774-13759392[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.035 3.3 8.5 2.0 1 23 499 521 499 521 0.97

2 18 0.097 9.1 7.1 1.1 2 23 557 578 556 578 0.96

3 18 6.6e-05 0.0062 17.1 1.3 2 23 761 782 760 782 0.96

4 18 0.005 0.47 11.1 1.4 2 23 786 807 785 807 0.96

5 18 0.11 9.9 7.0 4.8 1 23 917 939 917 939 0.96

6 18 0.0099 0.93 10.2 0.3 1 21 949 969 949 973 0.92

7 18 0.016 1.5 9.5 3.0 2 21 1057 1076 1056 1080 0.90

8 18 0.00024 0.022 15.3 5.4 1 23 1197 1219 1197 1219 0.97

9 18 0.0013 0.12 13.0 0.8 1 20 1224 1243 1224 1245 0.94

10 18 0.035 3.3 8.5 1.3 2 23 1256 1277 1256 1277 0.97

11 18 1.6e-05 0.0015 19.0 0.7 2 23 1316 1337 1315 1337 0.97

12 18 3.2e-05 0.003 18.1 1.6 1 23 1342 1364 1342 1364 0.95

13 18 0.00016 0.015 15.8 2.9 1 23 1370 1392 1370 1392 0.98

14 18 5.6e-06 0.00053 20.4 0.4 1 23 1408 1430 1408 1430 0.95

15 18 4.6e-07 4.3e-05 23.8 0.6 1 23 1436 1458 1436 1458 0.99

16 18 5e-05 0.0047 17.4 0.2 1 23 1464 1486 1464 1486 0.97

17 18 0.00018 0.017 15.7 4.1 1 23 1492 1514 1492 1514 0.96

18 18 0.0052 0.49 11.1 0.4 1 21 1520 1540 1520 1541 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.035	3.3	8.5	2.0	1	23	499	521	499	521	0.97
2	18	0.097	9.1	7.1	1.1	2	23	557	578	556	578	0.96
3	18	6.6e-05	0.0062	17.1	1.3	2	23	761	782	760	782	0.96
4	18	0.005	0.47	11.1	1.4	2	23	786	807	785	807	0.96
5	18	0.11	9.9	7.0	4.8	1	23	917	939	917	939	0.96
6	18	0.0099	0.93	10.2	0.3	1	21	949	969	949	973	0.92
7	18	0.016	1.5	9.5	3.0	2	21	1057	1076	1056	1080	0.90
8	18	0.00024	0.022	15.3	5.4	1	23	1197	1219	1197	1219	0.97
9	18	0.0013	0.12	13.0	0.8	1	20	1224	1243	1224	1245	0.94
10	18	0.035	3.3	8.5	1.3	2	23	1256	1277	1256	1277	0.97
11	18	1.6e-05	0.0015	19.0	0.7	2	23	1316	1337	1315	1337	0.97
12	18	3.2e-05	0.003	18.1	1.6	1	23	1342	1364	1342	1364	0.95
13	18	0.00016	0.015	15.8	2.9	1	23	1370	1392	1370	1392	0.98
14	18	5.6e-06	0.00053	20.4	0.4	1	23	1408	1430	1408	1430	0.95
15	18	4.6e-07	4.3e-05	23.8	0.6	1	23	1436	1458	1436	1458	0.99
16	18	5e-05	0.0047	17.4	0.2	1	23	1464	1486	1464	1486	0.97
17	18	0.00018	0.017	15.7	4.1	1	23	1492	1514	1492	1514	0.96
18	18	0.0052	0.49	11.1	0.4	1	21	1520	1540	1520	1541	0.92

Sequence Information

Coding Sequence: ATGGACGCTGTAGAAATAAATACTACGGACAATTCACACGACAGTGGAAGCGTCGTGCCAATGGTTGAAATATGTCGCGTATGCCTTTCGGATAATTTGGTAATGCGTGATTTATTCCCCACGAATGATGTTTCATCGCTGTCAGCAAAAGCGATGAGCTTTGCCAACGTCAAGATGGTGCCGGACGATGGATTACCCGGGCGCATATGTTGTCTATGCGCGGAAAAATTAGAATCTGCGTACGAGTTTAAACTCCAAGTGGAACAGGCAGATGCAATACTCAGAGAAAGATTCCCACCTATGAACATGAAGGAAGAATTGTTTTACAATGAAGTCGAGGTACACGTCAAGTCCGAAGGAGCCGAGCAACGGGATGACACGCACGTAGAGACTCATTACCAGACCATTGCAGATACTTTGTCATCGGCAATGACGAACGATGATGATTCGTGCATTACAATGAAAGATCCCAATGTAGCACTCGTATCGATCGAAAGGTTGAACGAAGAAGCAACTGTAACAATGGCAACCACGGAGATGACTTTAGTGACTGCCACTACTATTACTGCTAGCAATACCACCGACTCTAGTAGCACCGCTCCTGCTACTATTGCCATTCCTACTACTACCGATACTGCTCCTCCTATTCCTACTACTACTGTTCCTGCTACCATTGTTGCAATTGCTGCCACCACGATTACTACTACTGCGACTAcgactactgctactactaccactactactaataataataatgcagACACTACTTCTTCTGTTGCTGCTATGACTACGAGTACGACTGCGACTAGTAGTACCACCGACAATGACGTGACAACGTCAATGGTAGTGGAAGAGGTGGCGCATGTTCCTGTTACGGCAGAACAGGAGAGCGGTTGGATCGAGAGCAATGACGATAGGAATGATATTGAACAAATGGACTTTGAGGAAACCGAAATTACATGCCCTGAAGCGTCAGCGAAAGAATGTCTCGATGAGACTACTGAAGTGATGTGCAAGGACGAGGGGCTGTTAAAGTGCGAAACCGTAAGCGGAGACTTTGGAAGCGCCACGATCGAGCACGACTATATTTTACAGGAGACCTATGGAATATCGTCCGACGAGCGCAGATTCGACAGTGATGATCATGAGTCCGGCATGGTTAAGGTCGAATCGGAATGCTGCCCTCATCGCAGCCCTGCACCGTCATCGAGCCAAGTTACCCAGTTTGAAGACAAACGAGCTGACGATGCAAAAGCGGGTGATGCGCCAGTTACAGAGGTGTCCGAGATTATTCGCGAAAGTTGCATGAAACTCGGAGCGGTTGCGGAGGTCGCCGCTCCTTATCACACTGAGACCCGCAGGAGCAAACGCAGAGTTCTTCTGCGTAAGCGTTGTGCCACGGATCGAGATTCCGACGAAGAAAAttactttgaaaatttaaacCTCAGTTCTCGGTTAAGAAAAGTTCAAGCAGAGCGGAGCGAGAAAGTTCTTTTCGCGTGCTATTTATGCGATAAACAGTTTCTTTCAAAGGACGTGTTGAAGGAGCACATGCACTCCCACGAGGAAGTAAGGAAGACGTTGTCCCACAAGCGAACAGTGGAAAGGACGCCAAAGCAGCCGGATGATGTGCCAGAGAAAATGCCACCATCCGGTCGAAAAGCGAATAAGTGTTCGTACTGCGGCAAGGAGTATCTCTACATTATTTCCTTCCAGAAACACCTTAAACAACATGAGAGAGATgaacgagagagggagggatcGGACAACGATATGGCAGCATCATTTGAAGATTCGGGTAACGATAACGGACGGACGTGGGATTGTCGAAGACGAAAGACAAGGGACACGGAAGCTAACAGCAGTGACGTCGAAAGGGATGAAGATGTGGAAGAAGAGGGGGATATGGAGCGGTTGGAAGACCacgaggacgacgaagacgTTATTGGGGAGGCTGCGTGTGATCCTGTCTCTGAAATTGTGGAGGAAGAGCAGGGAGGTCAGGACGCAGCCGAAATTCGGGATAGTAGAACTGAAAATGAACACGGCATTTGCGAAACTACCAGCGTCTACGAGGTCGAATCTGTCGAAATGGATGCCGAAAGCAGAGCAAACGTTGACAAGGCAGGAATCGTGCGCAGAGCACGCAGAGCAACCGGTCAAACTTCGAAGAAGAATGGTAGTACGGACATCGCGGACGCAGCGCAACGCGAACTTGAAAGTCGCGGTAAAAACGGCAGACATCGACGAAAGCGGGTCCGAGCTGTTGACTTTGGTGTTTCGTGTGAAAAGTGCTCCAAACGGTTTCGCACCAGGAAGGACTTGCGGGAACACGCGATTACGCACGTAAGCTTAAAGTGCAGTGTGTGTACCGAACAGTTTGAGTCGTTggagaaattgcgaaaccATCGTACAAGGCACGTGCTCGAAGGAGTGTTGACGGAACAAGATCTAGAGGAAAATGCGGGACTCTGTAAGCTCGCGGAGTATCTCGACATTGGCAAAAGAGCCATGGGCAGTAGCGACGAGCAGCAAGGTATCGAGAAGACTGAAAGGAACGACGGCCAAGAAGATGCGGAATATTCTGAGAACGAAAACTGTGAGATCAGTACGAAAACAGGCATTGACAGTTCTGAACGCGTTGAGAACCTGTCGGCTACCACGGGACCTAGAAGCGCGAGAAGGCACCTGACCGGTGATGGCGATGTTGAGGTCGATGCCGAGGTAGATGCCGATGTTGACGGCGGGTACAGTTGCAAGCTTTGCTGCGAGCGTTTCTCCAGTAAAGATCGACTACAGAAACACACGGAACAGCACAAGGAACAGCACAACCGTGGCAGATCGTACAAATGTACACAGTGCAATAAGCTCTTCGGCAATGAGCTCGCGTTGCGAAATCATCTGATAGCGAGTAATCACAAGACGTTCCTTCATGGTCAAGAATACGATCCGAATAAACGTATAAAACGGGTTGCCGCGAGGGCGGCGCAGAGGATTATCGACAAGATCCGAACGGAGGATGGGTTGGGGGATTTCGATGAGGATTCTGGTGAAAATTCGGACGGTGGAATCGGCGGTGGGATTGATTCGGAGGCAGATCTCGGCACGTATGGACGTCGTCGTGAAATCAACCAGCAAAAGCGAGGCTACGCTCGAAGAGAACATCTCGTGTGTCCGAATTGCAATCGAAAGTGTAGTTCGAAACAAGCTCTTGCAAAGCACACGGAGCAATGTCCACATGCGAAGGAACAAAAGAGCGTCAAATCCGAGAAGACAAAAAAGAACACGACCGGGAAGGAGAATACGACGAGCACGACAAGTACGACGAGTACAACGAGTATGACAAGTACGACGAATATGGCGACGAATATTACGAGGAATATCGGTAGCGGTGGTACCGATATTGGCAGCGGTAGTCTGTCAGTGTCGTCGGTAGGGATCGGCGGAAACGGCAGAAATGGCAGTGCCAACAATTTTCTCGTGGGTTCGAATGCTGGCACGACCAGTGGATTTGGATTGCGCGTGGCTGCCGATGAACCCGATGACGATTCCGACTTCGAGAGTGGCCTTGACTGGCCCATGGACAATCATGAGTGCAAAACGTGCAAGAAAAGATACAGTACGAAAAAATCCCTGTTACGGCATCAGTTACTTCACGAGGAACCAAACTTCGAGTGTGACATTTGCAGAGTGAAATTTTACCGGAAAGACAAACTGAAAGCCCATTACGACAAGTGTTCGGAGAAGAATCCTGATCAAGTGAGGAAGTGTAACATTTGCGGTGACAGTTTCGAGAACAATCAGATCCTTCGGAAGCATAGGTCGAAACACGTGACTGAAGGTATCTTGACGGAGGAGGACCTGCGCGATACGGAGCCCCGACCGGAAGAAAAGAGGCAAGGAGAAAGAATAGGCAGGAAAAGGCGAACCGACATCGTAGGGCTCGAGTGCACCGAATGCAATAAAAGATACACCTCTCGAAAGGGCCTTTTACGACATATTCAAGTTCACGAAGGCAAAAAGTACCTTTGTGACATCTGCCCGAAGAAGTTTTACAGGCGAGAACACCTCAAAATCCACGTAGCCAAACACAACATGATCAAGCCGTACAAGTGTACGCGCTGTACGAAACGGTTCATCAAGGAGGACCAGCTAACGAGCCACTTGTCGAAACACGACCGCGCGTTCAGAAAGAGCAAAGAGACCGATAGTACAAAACGGTTTCTCTGCGAGATTTGCTCCAAGAGTTTCACTCAATCGACTACGCTGATCGCTCATTTACGCGCACACAACGGCATAAAACCATATGTTTGCGAGGTTTGCTCGCGGCCATTTACGACAAACGCTTACCTCAAGATGCATATGCGAACGCATACTCAGGAGCGTCCTTATATATGTCAATACTGTTCACGCGCGTTCGCAAGAGCAGACACGCTTGCGAATCATCTCACCTCTCACACTGGTGAGGCAAAGTACCATTGCAAGTACTGTCCGAAGAATTTTCGCCGGTTGAAGTCTCTCAAGGAGCACGTTTTCATCCATACCGGTCAACGGCCGTATGCCTGTCCGACCTGCGATCGGAGGTTTAACAATAATGGAAGCCGTTACGCTCACACCAAGCGATGCAAGCAAAACTTTATGCAGAATCAAAACCGGGCTACTCAAGGTATCGCCACGGCGACAGTGCAATCGATCACTCCTCATCATACCCAGCAGAGGCTCCAGCCGCAAACACTCATTCCACAGGGATCGCATCGCGATTCCTATCATCCGGCGGGACAGCAGACCTCCGCGCAAACAATATCGGCAACTCCTGCTCAAATCGTTAAAGCGCAAAACATTAAAACTATCACGATCACGAGGCCATCCGACTCGGTCTCGGTTTCGGCACAGCAAGTTATGCAACATCAAGAGATCTTGATGCCCTTGATTCTACCTCTTACCGTTACCCTCACCGACGTGGGTGAAGAGGTCATATTACCCGAGGGTACAAAAATATTTACTACGACTTAA
Protein Sequence: MDAVEINTTDNSHDSGSVVPMVEICRVCLSDNLVMRDLFPTNDVSSLSAKAMSFANVKMVPDDGLPGRICCLCAEKLESAYEFKLQVEQADAILRERFPPMNMKEELFYNEVEVHVKSEGAEQRDDTHVETHYQTIADTLSSAMTNDDDSCITMKDPNVALVSIERLNEEATVTMATTEMTLVTATTITASNTTDSSSTAPATIAIPTTTDTAPPIPTTTVPATIVAIAATTITTTATTTTATTTTTTNNNNADTTSSVAAMTTSTTATSSTTDNDVTTSMVVEEVAHVPVTAEQESGWIESNDDRNDIEQMDFEETEITCPEASAKECLDETTEVMCKDEGLLKCETVSGDFGSATIEHDYILQETYGISSDERRFDSDDHESGMVKVESECCPHRSPAPSSSQVTQFEDKRADDAKAGDAPVTEVSEIIRESCMKLGAVAEVAAPYHTETRRSKRRVLLRKRCATDRDSDEENYFENLNLSSRLRKVQAERSEKVLFACYLCDKQFLSKDVLKEHMHSHEEVRKTLSHKRTVERTPKQPDDVPEKMPPSGRKANKCSYCGKEYLYIISFQKHLKQHERDEREREGSDNDMAASFEDSGNDNGRTWDCRRRKTRDTEANSSDVERDEDVEEEGDMERLEDHEDDEDVIGEAACDPVSEIVEEEQGGQDAAEIRDSRTENEHGICETTSVYEVESVEMDAESRANVDKAGIVRRARRATGQTSKKNGSTDIADAAQRELESRGKNGRHRRKRVRAVDFGVSCEKCSKRFRTRKDLREHAITHVSLKCSVCTEQFESLEKLRNHRTRHVLEGVLTEQDLEENAGLCKLAEYLDIGKRAMGSSDEQQGIEKTERNDGQEDAEYSENENCEISTKTGIDSSERVENLSATTGPRSARRHLTGDGDVEVDAEVDADVDGGYSCKLCCERFSSKDRLQKHTEQHKEQHNRGRSYKCTQCNKLFGNELALRNHLIASNHKTFLHGQEYDPNKRIKRVAARAAQRIIDKIRTEDGLGDFDEDSGENSDGGIGGGIDSEADLGTYGRRREINQQKRGYARREHLVCPNCNRKCSSKQALAKHTEQCPHAKEQKSVKSEKTKKNTTGKENTTSTTSTTSTTSMTSTTNMATNITRNIGSGGTDIGSGSLSVSSVGIGGNGRNGSANNFLVGSNAGTTSGFGLRVAADEPDDDSDFESGLDWPMDNHECKTCKKRYSTKKSLLRHQLLHEEPNFECDICRVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNQILRKHRSKHVTEGILTEEDLRDTEPRPEEKRQGERIGRKRRTDIVGLECTECNKRYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEDQLTSHLSKHDRAFRKSKETDSTKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHTKRCKQNFMQNQNRATQGIATATVQSITPHHTQQRLQPQTLIPQGSHRDSYHPAGQQTSAQTISATPAQIVKAQNIKTITITRPSDSVSVSAQQVMQHQEILMPLILPLTVTLTDVGEEVILPEGTKIFTTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -