Tatt011222.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trypoxylon attenuatum
Gene Symbol
-
Assembly
GCA_963989405.1
Location
OZ022491.1:26437902-26443021[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.0046 0.43 11.3 0.3 2 23 120 142 120 142 0.96
2 26 0.0098 0.92 10.2 1.6 1 23 146 168 146 168 0.98
3 26 0.25 23 5.8 0.9 1 23 174 197 174 197 0.96
4 26 0.00033 0.031 14.9 3.0 1 23 204 227 204 227 0.97
5 26 4.6 4.3e+02 1.8 0.2 2 11 238 247 238 249 0.82
6 26 0.0032 0.3 11.7 4.9 1 23 267 289 267 289 0.97
7 26 6.5e-05 0.0061 17.1 0.5 2 23 294 316 293 316 0.97
8 26 2.3 2.1e+02 2.8 0.2 2 12 323 332 322 343 0.71
9 26 2.2e-05 0.0021 18.5 1.6 1 23 349 371 349 371 0.98
10 26 0.0095 0.89 10.3 1.1 2 23 511 533 510 533 0.90
11 26 0.006 0.56 10.9 1.6 1 23 537 559 537 559 0.97
12 26 0.0011 0.1 13.2 0.4 2 23 566 588 565 588 0.95
13 26 0.00011 0.01 16.4 2.5 1 23 595 618 595 618 0.97
14 26 0.0015 0.14 12.8 6.3 1 23 653 675 653 675 0.98
15 26 0.0028 0.26 11.9 1.8 1 23 679 702 679 702 0.96
16 26 0.00061 0.057 14.0 0.5 1 23 708 730 708 730 0.98
17 26 5.8e-07 5.5e-05 23.5 1.3 1 23 736 758 736 758 0.99
18 26 0.00018 0.017 15.7 6.6 1 23 927 949 927 949 0.98
19 26 9.9e-07 9.3e-05 22.8 1.8 1 23 955 977 955 977 0.98
20 26 0.39 36 5.2 1.1 1 23 984 1007 984 1007 0.91
21 26 8e-06 0.00075 19.9 1.4 1 23 1013 1035 1013 1035 0.98
22 26 4.9 4.6e+02 1.7 4.6 2 19 1041 1058 1040 1063 0.79
23 26 6.3e-05 0.0059 17.1 3.7 1 23 1070 1092 1070 1092 0.94
24 26 2.2e-06 0.00021 21.7 1.2 1 23 1096 1118 1096 1118 0.99
25 26 0.0066 0.62 10.8 1.6 1 23 1124 1146 1124 1146 0.95
26 26 6.3e-06 0.00059 20.3 0.6 1 23 1152 1174 1152 1174 0.99

Sequence Information

Coding Sequence
ATGGCTTGCGAAGAAGATCTCTTTTTATCCGTTCCCGTAAAGTGTCGTCGCAAAGGAGTGATAGTGCAAGACAGTAACGGGAGATTGCGACTTGTGCTCATACGATCACAAGAATCTAATCAAGTCGCAGGAAAAATCACAACCCTTAATGGATCACAGCAAGTTCAAACTATCGAGAATGCTGCACCATTAGTTAGAGGTGTTGAGGAATTAGCTACACCAACGCCGATATCGCCCATTAGAAAAACTCCAGCCAAATTGATGAAAGAGGTGGAGAATTCTTCGAAGAAGGCCACGCGACGCACATTAGAAACCGAAGGGGATGAGGTAGATACGATTCTGAGTTCTCTGCAAAATACATGTCCATTCTGTCAAAAAGTATTCGACGatatcgaaaaagtgcaaacCCACGTCAAGAGAATTCATCGAATTCCTTATAAATGCGATAAATGCTTCCAAGGGTTCCATACCGAAGAGGGTCTGGAGCTTCATAGAGCGAAGCATCAAGAGAAACGAGTGTACGAATGTGACATTTGTCACCTGAAGTGGGTGCAGGAAAAGTCACTGATGATTCACAAGCTTCGTTATCACAGCACTCAAACCGCGGAGTACATTTGCGAACACTGTGGGAAAACTTTCCATGTGGAGAGAGATTTGGACTATCATATAAGGAGAAATCATCTAAAAGAATCGGATGAACCTGCTTTTGAAGTATGCCAGTACTGTGGTAAGCAAGTGAAAAGTATACGCGGTCACGAGTCGTTACACTACAAGGAAATAATCAAAGAGAAGAAGCGGTTCCCTTGTCATTTGTGTAAAAAAAGATTTTGCGATCAAGTTAGACTGGATCGTCACCTAGTTCGTCATAGTAGTGGAATTAAATGCGAAGAGTGTGGAAAAGAGTATCCGGGACGACAAGAATTGAGAAATCATCGGCGACGAAGGCACGGTCAGGGTACATATCTTACGTGTGTCGTCTGTCAGAAAACTTTTGCTATTggatattattatttgcatGTCCTCACGCATGCTGGGATACGACCATACAAATGCGATATTTGCGAAGAAAATTTCACTCAAAGAACGACTTTGTTGAGGCACCGGAACCAACACCCGGGACCATTGCCTCCGGAACCACCCAGTAATCCACATATTGTTTATCTGGCAAAGAAATACTTGCAAGAGCTACGGGAGAGCCAAATAGACGAAGATTCAGTCGCGAACGAACACCTTGAAATAATCACCGAATGGCACGTACCGGTCCAAGACAAATCAGGATCATACCGCATTGTAATCGTGGGGGCATGCGAAACTATCAAAGAAGAAAAGCATATAATAGCAGAGAGCAAGAAGAAGCCAAAGCGAAGAAGAGTCGAGGAAACGGATGATTACACGGAATCGGTACTAATGAAGTCAGAGATACTAGAAGAAGTTGAGGAAGAAGTTGTAGGCGATAAAGTGGAAATGGTCGAATTCGAATCGGTAACCGAGAAGGACGAAGCTGACCTTATATTGGACGATGTTCGAACTGTGTGCCCAGTGTGCGATAAGCGTTTCAATAATCCAAAGAAAGTGGAGTGCCACGTAAGGAACGTCCATAGAAAGGCCTTCCCGTGTGATCAATGCAAGAGAGCCTATCACTCGCTTGACCGTCTGGAAAAGCATCGGATAATGCATAATCCAGATTTCTATTTGGAATGTGAAATTTGCAAGTCGAAATATAAAAGCGAAGATGGACTTAAGAGGCACCAGATCCGCGTTCACAGCGACGAAGCGTTGGCATTCGTTTGCGAACACTGCGGTAAAGGATTCAAGTTGCACATTGACTTGACTTATCACATCAAGAGAATACATACACCCGAAGTGAAGGTCTGCAGATTCTGCGGAAAAGCAGTCAAAGACGTGCGGGGTCACGAGTGGAGGCATCTCAAACGGAATGGTTTGATCGAATCAAACTACTCCTGTCATTTCtgtcaaaagaaatttcatgaCCCAAATAGATTGGAAAGACACATTAAGCAGCACGAAAAAGGTTTCAAGTGTCCAGAGTGCGGTAAAGAGTGTCAGACTGGCCGAGAGCTTTCGGATCACAAGCGACTAAAGCATTACGAAAACAAGGTGTTTAAGTGTGCACTTTGCCAAAAGGTCATTCCCAATAGCAGTAACTTCTATCAGCATGTCCTTACGCATGCCGGGATAAGACCATACAAATGTGACATATGCGACGAGGATTTCACTCAGCGATCGAGCTTACTGAGGCACAGAAGACAACATGCCGGCCCACTTCCGGCTTATTCTTTGGAGCATCCGCAAATTGCTGATCTCGCAAGGAATTTTCTCAAGAAGTTTGAGAACAATGAGGTCGATAAGACCATGGTGCACAATACtaaatcGTACGGCCTAGACCCACTCGCGCCGACATTTCTGATAGTAAAGGTAGAGGATGATTACTTTCGGATACCAAAGTCACTGAGCGTCTTCATGATGAAAGAATCAATGTCCGGTGAAAAAGATCAGAAGACATCCTCCAAAGAGGAAACACCCACGGAAGAGAAACCCGTAGCCGAAGAGAAGACGAGCGAAGAACCGAACCAAGAATCGAACCAAGAATCGAACCAAGAACAGGACGAAGAACCGAGCAAACCCTCGAACGACGACAACGACTTCGACGACCTCGACGATGCACCGTTGGACTTTAGAAAAAGGCAACAGGAGGAAGAACTCGCCGAGGCAAAGCGGAACTCTTCCGCTTCCGAGGAATGTGCAGCGATAAAGAGACACAAGTGTGAAATTTGTAACGCGTGTTTCGCAAACAGAAGCAAATTCACAAGACACATGTTCAAGCATAGTAATTCCAGGCCACACAAATGTACAATCTGCACGAAAGCATTCAAGACCAGCGCATACTTGGCACGGCACATTGAGACTCACGATGAACCGACAAATCTCTTTGCCTGCGACCTTTGTGATTTTAAAGCACGCGCAAAAGCATACCTCAAGATACACCACATTCGGAAACACACTGACGATTACAATTATAGCTGCGAGCGATGTGGCAGGATGTTCAAAGTCCAGTCCGATTACACGACACACATGAAGGACCACGATACGGAATCGTGTGTCTGCGACATCTGCGGATCATCCTACCCCAGCAAAAGTTCGTTCTACTTCCACAAACATTATAAACACAAGACTCAAGTGAAAGAATTCGAGTGTCAGACTTGTCACAAGAAATTTAAGACGCAGAAGAATCTCGAGACTCACGGTGAATTACATAAGATAAAGTATGTTTGTGAACAGTGCGGCATGGAATTCAAGTTCAGATATGGCCTCACGAAACACCTTCGCACGCATTCCGGTGAGAAATCGTATCTATGCGCAATCTGCGGAAAGACTTTCAGTTGCTTGAGTTCGCAAAAGATTCATCTGCTCACTCACGTGGGAGAAAGACCTTACGTTTGTGACATTTGCGGTCAGAGCTTTACGCAAAGATCACCAATGATGCTCCACAGGCGAAAGCATCCTGGAGTACATCCCACGCCACCGCCTATTAAAATTACAGATTTGCTGCACGGGGTCCAAGATAAAATTATCGTCAACAAGAAGAGCAAGTAA
Protein Sequence
MACEEDLFLSVPVKCRRKGVIVQDSNGRLRLVLIRSQESNQVAGKITTLNGSQQVQTIENAAPLVRGVEELATPTPISPIRKTPAKLMKEVENSSKKATRRTLETEGDEVDTILSSLQNTCPFCQKVFDDIEKVQTHVKRIHRIPYKCDKCFQGFHTEEGLELHRAKHQEKRVYECDICHLKWVQEKSLMIHKLRYHSTQTAEYICEHCGKTFHVERDLDYHIRRNHLKESDEPAFEVCQYCGKQVKSIRGHESLHYKEIIKEKKRFPCHLCKKRFCDQVRLDRHLVRHSSGIKCEECGKEYPGRQELRNHRRRRHGQGTYLTCVVCQKTFAIGYYYLHVLTHAGIRPYKCDICEENFTQRTTLLRHRNQHPGPLPPEPPSNPHIVYLAKKYLQELRESQIDEDSVANEHLEIITEWHVPVQDKSGSYRIVIVGACETIKEEKHIIAESKKKPKRRRVEETDDYTESVLMKSEILEEVEEEVVGDKVEMVEFESVTEKDEADLILDDVRTVCPVCDKRFNNPKKVECHVRNVHRKAFPCDQCKRAYHSLDRLEKHRIMHNPDFYLECEICKSKYKSEDGLKRHQIRVHSDEALAFVCEHCGKGFKLHIDLTYHIKRIHTPEVKVCRFCGKAVKDVRGHEWRHLKRNGLIESNYSCHFCQKKFHDPNRLERHIKQHEKGFKCPECGKECQTGRELSDHKRLKHYENKVFKCALCQKVIPNSSNFYQHVLTHAGIRPYKCDICDEDFTQRSSLLRHRRQHAGPLPAYSLEHPQIADLARNFLKKFENNEVDKTMVHNTKSYGLDPLAPTFLIVKVEDDYFRIPKSLSVFMMKESMSGEKDQKTSSKEETPTEEKPVAEEKTSEEPNQESNQESNQEQDEEPSKPSNDDNDFDDLDDAPLDFRKRQQEEELAEAKRNSSASEECAAIKRHKCEICNACFANRSKFTRHMFKHSNSRPHKCTICTKAFKTSAYLARHIETHDEPTNLFACDLCDFKARAKAYLKIHHIRKHTDDYNYSCERCGRMFKVQSDYTTHMKDHDTESCVCDICGSSYPSKSSFYFHKHYKHKTQVKEFECQTCHKKFKTQKNLETHGELHKIKYVCEQCGMEFKFRYGLTKHLRTHSGEKSYLCAICGKTFSCLSSQKIHLLTHVGERPYVCDICGQSFTQRSPMMLHRRKHPGVHPTPPPIKITDLLHGVQDKIIVNKKSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-