Basic Information

Gene Symbol
ARID5B
Assembly
GCA_963989405.1
Location
OZ022490.1:28434726-28444235[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.9e-23 1.1e-19 70.7 0.0 2 89 266 351 265 351 0.95

Sequence Information

Coding Sequence
ATGAAAGCAACTGCGAAGCGTAACAGTGGCTCCCAAACCAAAAAGTGTATTATATCACGTAGTACAAATGGATCGGTTGCCAAACCCAGGCAACATGAATTGGCAGACAAAGCAGACGAAGTGCTGACGATATCGGAAAAGGTAGTCGTGCGCGTCCACGACCTGGTGACATGGTTATCGCCAAGCCTATCATGGTCATGGGGTCGCGAAGTCTTATATCCACGAACACCTTCGTCATCCCCGGAGAACAGTCCCCTGAGATACGAGATGCCACAGCCACAGGTGCTCACGGATCCTGGTATCGACTTTTCCGATGTGGAAAAGCAACAAAAGGAGTTCGAAAACACATTGAACGGCTCGAGACGCACGGAACCAGTGTCTCAGACGAAGGTCGTGGTTCTTTCTTATCCGAGGTATTGTCGATATCGAGCACTCTTGCGAAGGCTCGAAGGCGCCGAACCGTCCTGGCTTTGCTCGTCCATAGCCGCAGCTCTTGGTGGATTCACTGCTACCCCCGGTACTCGGGTACTCTTCTGCAGAGACACCTTCGACTATCCTGACCTCGAGACTCACGAACTGCTTTGTAATCATCTTGCACCAAAATTAAAGGGACGACCAAGGCGGAAACGTAAAAAGCGAAGTGCATCACCGGGCGAGTCGAGTAACGAAAGCGAAGCTTCCGTAGCGTCGACGTCAAAGAGCATACCAACGAGCACCTGCGTAGTGTCAACGAGCGTCGGCAGACCACCCGCTTCTTGCGTAGTTCGTCGCAGCGAGCGGAAGACCAGCgtcgaggaaaagaaatttctcatCGATGTGCAGAATTTCATGACCTCACGGGGCACTCCCGTGGGGAAGATGCCCTTGCTTGGCTATAGACAAATTGATCTCTTCCTATTCTATACGAAAGTCCAAGTTCTTGGTGGCTACGATTCTGTTAGTGCCAGCCGTCTTTGGAAGTCGGTTTACGACGACATAGGGGGCAATACAGGATCGACCAGTGCTGCAACTATTACGCGGCGACATTACGAAAGATTGTTATTACCTTACGAGAGGTATCAAAAGGGGGACGAAAATAAAGTGAGATTGACGCATGGGAGACGTTCAAAAAGCAACAGCGTGTCGGAAGATTCTGAGGATATTAAACAGGAACCGAATGAACCTTCCGAAACTCCTCCCCCACTTGGAGACACAAATCCAACCACAACAACTCCACCATTAGAATCAATTATATCGACAGCGCCATCGCTTTCGAGTGATAAACCAAAAGCAGAGACTGGCAAGACATCTTCCTTGCGTAGCGTTAGAGTCAAGCCAGAACGTTTGAAATCACTGAACACAATGATTGCCAATAACAACACATCACCACCTAGCCAGCAACAACCAACCAGTCAACTGCCAAGTCCACCACCCTCTTCTAATACGTCAATTTCGACACCGAGTAGTACACCTTCGACAACGCCTACGAACGGCACTGCTAATCAGAGTGTCTTGGAAAGACAATTGAACAGTCCTCTGATATCGCAACAAGTACCACCATCGTGTTCGCCGCCGATAATACCTGTAACCACTGTAGCAACGAATGCCTCGACAGTGGTAACGTTAACGCCGCCACCGGAAAAGGATATGAAGGAGATCAAGTTAGATCCTAAACAAACGACCCTATTGGCACAAGGAAAAGAGAATATCCCATTGTTTCGTGAAAAAGCGATGTTCACGGAGAAAGCGATCGTACCACCCGCATCTCCGGAAGTGATCGATCTCGAATCGGAGAGCGATACGAGTAGGGATAAAATAATCATTCCTAGCTTCAAGAAACGTAAACTTGAAATTCTTCGCGAGGGTGGTCTCGAAGTCACTGCCGTTGACCTGGACGCTCGACCAAGCGTGATACAAAGCAGCATCACACCACCAACGCCAGCTACAATGAAATCCGAGGAGAAACCGCCTATATCCTATCCACTTCCAGTTACGCCAAATTCCATTCCTAAACTGATATCCGTCACGGTAACGCCAGACATTGGACACATGTTGCCATCGCCACAAGAGCATCAACACCACGCCCATACGGCGGCACGTTCCCAACCAACGAGTAAACCGCAGCTGATTCATCATAACAACAATAACATCACtacaaataacaataatatggTGAATAGTCGTGTGATCAATCTCGGTACCTCGAACAACTCGGCATTGTTGCAACTCTACGCAAATGCTAATGTCCCACCGCCGCCGCCTacgtcgtcgtcctcgtcgtcgtcgtcatcgtcgtcgacATTATCCCATGGAAGTCATCGTTTTGTGCCGCCACCTGTACCTAACGGTAGGATACTACCACCAAGAGTAACCCAATCAAGATCAATTTTCGCACACAACGAAAAGACGGTTTATGGTAATCCAAAGGATATTCTCGTGCCCCCAAAATATCGTCCATCGATGCAGCGTTTACCACCGCAGCATATAAGTTGCGCTGCTACCGAACCATTGCAGCCGGGAGTTTTGGACTTGACGCATAAATCGAGTGAGAGATCGACGTTTCCTAGGCCGAGTCTAGAAATAGTGAAAGTACCTGTAGTGCCGAGGCCTAATCCGTTAAACTTGGAAATGAGAAATTCGAGCGTAAATCGGGATAAACCAACCGACTGTTCGAAACGAAGTTTTCCCGGTTATCAGACGGTCTTGGACAGCCGGACAATGGCTTCGAACAATCTTGAGATTACTCTTGTCAATCCAAAACAAAAGGGTGCTTCGCCACACGTGCAGATACCTAGTCCTACCAATAGGACTAATCCAACGACCGCGCCGCGCAGACCTCAGCCGAATGGGAAGTACGCGGCGCGGAGTGAACCAATCTCACCGTATACACCAAGAAAACCGAGTAGTCACCCTGTTATACCTAATGTACCTAATTTAAATCACCTAAACAGTGGAAATAACTATCCGAGAATGCCAACGATGCCACAACCGACGGGTATCGATAGGCGAAAAAGTGTCGAGTCTATCAGGGAGCAGCAGCATCAACGTAGGATTAGCGAGGGCGACAAATCCTTGATCGCGCAGCAGcaccaacaacaacaacagcagcagcagcagcagcagcagcaacaacagcaacaacaacaccAGGAACTAAGGCAGAACGAGGTTGGGAGGCGGCACAGTGTACCGAGTATACCTTCGGGCTTCGTACCCCAAGTGCCACAGAATAATTCAGCCTTTCTTCCACAACTGCCAAACTCGCCCGGCAAGTTCCTACCGATTTTAGATCCTATGTACTATTCCGCATTCTACAACGGCTTATTCCCCCCGCCAATTCCGCCCACGGCTGCCACGTCGTTTTTACCACCGGAATTCAGCGCGTATTATAAAGAATTACTTGCTTCCTCGCAACCAAGACTGGCGATGACGGGACAGCAACCGACTGCCCCTACGTCTAAATAG
Protein Sequence
MKATAKRNSGSQTKKCIISRSTNGSVAKPRQHELADKADEVLTISEKVVVRVHDLVTWLSPSLSWSWGREVLYPRTPSSSPENSPLRYEMPQPQVLTDPGIDFSDVEKQQKEFENTLNGSRRTEPVSQTKVVVLSYPRYCRYRALLRRLEGAEPSWLCSSIAAALGGFTATPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSASPGESSNESEASVASTSKSIPTSTCVVSTSVGRPPASCVVRRSERKTSVEEKKFLIDVQNFMTSRGTPVGKMPLLGYRQIDLFLFYTKVQVLGGYDSVSASRLWKSVYDDIGGNTGSTSAATITRRHYERLLLPYERYQKGDENKVRLTHGRRSKSNSVSEDSEDIKQEPNEPSETPPPLGDTNPTTTTPPLESIISTAPSLSSDKPKAETGKTSSLRSVRVKPERLKSLNTMIANNNTSPPSQQQPTSQLPSPPPSSNTSISTPSSTPSTTPTNGTANQSVLERQLNSPLISQQVPPSCSPPIIPVTTVATNASTVVTLTPPPEKDMKEIKLDPKQTTLLAQGKENIPLFREKAMFTEKAIVPPASPEVIDLESESDTSRDKIIIPSFKKRKLEILREGGLEVTAVDLDARPSVIQSSITPPTPATMKSEEKPPISYPLPVTPNSIPKLISVTVTPDIGHMLPSPQEHQHHAHTAARSQPTSKPQLIHHNNNNITTNNNNMVNSRVINLGTSNNSALLQLYANANVPPPPPTSSSSSSSSSSSTLSHGSHRFVPPPVPNGRILPPRVTQSRSIFAHNEKTVYGNPKDILVPPKYRPSMQRLPPQHISCAATEPLQPGVLDLTHKSSERSTFPRPSLEIVKVPVVPRPNPLNLEMRNSSVNRDKPTDCSKRSFPGYQTVLDSRTMASNNLEITLVNPKQKGASPHVQIPSPTNRTNPTTAPRRPQPNGKYAARSEPISPYTPRKPSSHPVIPNVPNLNHLNSGNNYPRMPTMPQPTGIDRRKSVESIREQQHQRRISEGDKSLIAQQHQQQQQQQQQQQQQQQQQQHQELRQNEVGRRHSVPSIPSGFVPQVPQNNSAFLPQLPNSPGKFLPILDPMYYSAFYNGLFPPPIPPTAATSFLPPEFSAYYKELLASSQPRLAMTGQQPTAPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00391079; iTF_00633415;
90% Identity
-
80% Identity
-