Basic Information

Insect: Tromatobia lineatoria
Gene Symbol: stc
Assembly: GCA_949699805.1
Location: OX453052.1:7044138-7053583[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 3.2e+04 -4.3 1.6 15 19 509 513 508 513 0.81

2 15 0.14 2.2e+03 -0.4 0.1 4 10 542 548 541 549 0.94

3 15 2.6e-06 0.042 14.7 11.3 4 18 559 573 557 574 0.94

4 15 7.3e-05 1.1 10.1 14.1 1 18 610 627 610 628 0.94

5 15 0.56 8.8e+03 -2.3 0.6 1 5 637 641 637 646 0.83

6 15 3.9e-08 0.00062 20.5 11.8 1 19 666 684 666 684 0.97

7 15 0.3 4.8e+03 -1.5 1.8 5 10 713 718 713 718 0.96

8 15 0.0046 72 4.3 12.3 4 18 731 745 724 746 0.86

9 15 1.6 2.5e+04 -3.8 2.0 5 10 775 780 775 780 0.93

10 15 0.0075 1.2e+02 3.6 12.4 1 11 786 796 786 808 0.88

11 15 1.9e-07 0.003 18.3 19.5 1 19 813 831 813 831 0.98

12 15 0.36 5.7e+03 -1.7 0.6 5 10 859 864 857 864 0.95

13 15 2 3.2e+04 -5.4 8.6 10 19 878 888 867 888 0.79

14 15 2.1e-06 0.033 15.0 13.7 1 16 924 939 924 950 0.85

15 15 7.8e-06 0.12 13.2 13.6 1 19 956 975 956 975 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	3.2e+04	-4.3	1.6	15	19	509	513	508	513	0.81
2	15	0.14	2.2e+03	-0.4	0.1	4	10	542	548	541	549	0.94
3	15	2.6e-06	0.042	14.7	11.3	4	18	559	573	557	574	0.94
4	15	7.3e-05	1.1	10.1	14.1	1	18	610	627	610	628	0.94
5	15	0.56	8.8e+03	-2.3	0.6	1	5	637	641	637	646	0.83
6	15	3.9e-08	0.00062	20.5	11.8	1	19	666	684	666	684	0.97
7	15	0.3	4.8e+03	-1.5	1.8	5	10	713	718	713	718	0.96
8	15	0.0046	72	4.3	12.3	4	18	731	745	724	746	0.86
9	15	1.6	2.5e+04	-3.8	2.0	5	10	775	780	775	780	0.93
10	15	0.0075	1.2e+02	3.6	12.4	1	11	786	796	786	808	0.88
11	15	1.9e-07	0.003	18.3	19.5	1	19	813	831	813	831	0.98
12	15	0.36	5.7e+03	-1.7	0.6	5	10	859	864	857	864	0.95
13	15	2	3.2e+04	-5.4	8.6	10	19	878	888	867	888	0.79
14	15	2.1e-06	0.033	15.0	13.7	1	16	924	939	924	950	0.85
15	15	7.8e-06	0.12	13.2	13.6	1	19	956	975	956	975	0.97

Sequence Information

Coding Sequence: ATGGCCACTTGGGACGGTTCGGACCAGGCGGGTCCTCCGGACGACCCAAATTTCTACCTCTTTGCGCACGCGACAAACGCAGCCGCTAATCCGCAAACGTGGGACTATTATTCCACTGCAGGAAACGGTGGATATTCCCATGGTTCGATGGGTATTTATGCTCAAAACAATCTTCCGACCGTAACGCAGACTTATCAAGCTCCGTCGTACCAAGAGTCGCTTTTCGCTCCCGTAGTAGAAAATACTTCTGCAGAGCGCGCTTGTTTCTTTGAGAATAACAGACCATTGCAAAAACTCGCTTCCTTCAACTCTCCAAGATATTCAGGACCGAAGCATGATAATCCTCTGAAAACTTTGCACAAACACTCCAATTTACACGCAGGCGCAAGCGAATTTGTTCCTACAtcgaaaaattcgcaaaaaagcTCTTTGACCGCTTCTTACAACGGAACTGACGGTCAGTACAACGACTACACTTCCGGAAATCCTCAGGGATCTTCGCATATCTTTTTCAGCGATAATAGAAATCGTTCTAACGACAGACGCTACGATAATACGAAGAACAGTAATTCTCACAGAGGATCTTACAAACCGCAGCGTTCTCGTGGCTTCGAGCAATCTTACAACGGTCCGCGAGGCAACGATTCGGCTGTTATAGCTCAGGAAGTTCCTCTAGGCAATTCTCAAGCCGAGGACAACGCCTTTAGAGGCTCCAAAGCTCAGAGAGCGAGAAATCACGGTAGATTTCAAAACGATAGATACTCGAATCAAAATCGGCAGCAGTACGAAAAATCCAGGCTGGATAGGAGAAAAAATACGGTGGACACTTGGCAGAATCCTACGGAAATTCCCAAAGATCATTTGGTGGGAAAAGAAGAGGAACAACCGAGAGAAAATGCTAATAATCACAATTCCTACGGCGCCAGAGGAAAGTGGACGAGAAATGATAGAAGATTCACGAATGAGAGATATTTGGGCAGCGGAAAATCACATCCGGGAACCAACGAGTACGAAGAACAATCCTACGAACCTCAAACTCCGAGCAATTCTTCAGTCGCACCGAGAAAAGAGATTTCTCACAATCGTGAAGGTGATAGACTTTATAGAAACGATAGAGTACGAGGAAAACAAAGAGACGGCTCCGCGAACTTTGAGCGTACAGGAAATCATGATTACGATGGACACATTGATGATAGAGATCTTAAATTTGATAGAAACAgagatgaaggaaaaaaatcgacGGATTCGCGCGATGATGAACAGAATTGGAGACAGAAGGACAAAGTCACTCCTAGAGAATTTATGCCTAagaagaattacaaaaaaattgattttgATGACGATGCAAGTCAGAGAGAACGGTTAACTGAACAGTTGAACCAAGGTCGGTTAGAGTGCCTAATTTGCTGTGAGTATATAAGGCAAAACGATCCGGTTTGGTCCTGCAACAATTGCTATCACGTTTTGCATTTGAAGTGCCTGAAGAAATGGGCTCATTCGTCACAAGGCGaaAACGGTTGGCGATGTCCAGCTTGCCAAAATGTTAGTCTGACGGTacccgaaatatatttttgcttctGCGGCAAGGCGAGAGCTCCCGAGTGGAATCGACGCGACGTTGCGCATTCTTGCGGTGAAATTTGCGGCCGTTTGAGGGCTAAAAACAATTGTGTACACAAATGTACGTTGCTTTGCCATCCGGGATCCTGTCCCGAATGCATCGCGATGGTTACGAGACACTGTGGATGCGGAAGAACTTCACAGAGCTTAAAATGCAGCACTACGACGCTTGTCGTCTGCGAAGCCATTTGCGAAAAGAGTCTGAATTGCAATATACATATTTGCGAGAATAAATGCCATCACGGAGAGTGCGGATCTTGCGAAAAAACTTTGCATCAAGAATGTCACTGCGGAAAGCATGAAAGAGACGTTACCTGCACTGCCGATGTACCGCCGACATATAGTTGCGGAGAAATTTGCGACAAGTTACTCGCCTGCGGTAATCATCGGTGCAAAGAGCTGTGCCATCCTGATGATTGCGGCGTGTGTACTTTGCAACCTGCTTCAGTAACGCACTGTTGTTGCGGTCAAACTCCTCTGATCGTTACCAGGGAAAGTTGCCTTGATCCTATCCCCACGTGCGAGAAAGTCTGCGCGAAGAAATTAAAATGCGGCCAACCCAGCGATCCGCATACGTGTAAAATGGACTGCCATCCTGATGATTGTCCGGAGTGCGAACTGACGACGAAAGTCCGATGTCGTTGTGGTAACATGGACCGCGAAATCGCCTGCAAGGAGCTCCGGACTAAGGCGGATGATGCGCGCTGCGAGAAAAAGTGTACTAAAAAAAGATCCTGCGGAAAACACAAATGCAACCAGCCTTGTTGCATCGATATTGAACACATATGTCCTATGCCGTGCTCCAAAACTTTAAGTTGCGGGAGACACCGATGCCAATTGTGTTGCCACAAAGGAAGATGTCAGCCTTGTCAAGAAATGAGCTTCGACGAGTTGCACTGCGAGTGTGGAGCGTCGGTGATTTATCCTCCGGTCGCTTGCGGCACGAGAAGACCAACTTGCAATCGTCCGTGCACTCGACAACACGCGTGCGATCACGAGGTTCTGCACAATTGTCACAGCGACCCGTCGTGTCCGCCTTGTACCGTACTGATGCAAAAATGGTGTTACGGCAAGCACGAGCTCAGGAAAGCTGTGCCTTGTCACGTCAACGAAATTTCGTGCGGATTGCCTTGCAGCAAACCCATTTCCTGTGGACGCCACAAATGCATTACACTGTGCCACTCCGGTGCCTGCGAAAAACCAGGACAGGTTTGCACACAACCGTGCACAGCGCCTCGAGAAATGTGCGGACACATTTGCGCCGCACCGTGTCACGAGGGAAAATGTCCCGACACGCCGTGTAAAGAAATGGTCAAGGTAACTTGCACGTGTGGTCATCGAAGCACTACTAGAGCCTGTGCTGAAAATTCTCGGGACTTCCAGAGAATAGCGAGTGGAATATTAGCGAGTAAGATGGCAGATATGCAGCTCGGGCACTCAGTGGATTTGGAGGAGGTATTTGGCCAAGGCGCGAAGAAACTGAATCAGCTGAAGACTCTAGAGTGCAACGACGAGTGCAAAATCATTGCGAGAAACACGAGAATCGCTTTAGGACTTCAAATCGTCAATCCCGATGTCAGTGGGAAGCTAATGCCGAGATACACCGAATCTATGAAGCAATGGGCGAAAAAAGATCCGCACTTTTGTAAAATGGTTCACGACAGGCTCACTGAACTTGTTCAATTGGCAAAAACTTCCAAACAAAAATCACGTAGCTACTCCTTCGACAGCATGAACAGGGATAAACGTAATTTCATACACGAAATGTGTGAACACTTCGGATGCGAAAGTCAGGCGTACGATAAGGAACCCAAACGCAATGTCGTTGCCACTGCAGTTAAAGATAAGTGTTGGCTGCCAGCTTACAGCTTGTTGGAAATAGTCCAGCGGGAAAACGGTCAACGAAAAGTACCGCGACCAATGCTCAACTCATCGAAACCCAATTCTACTTTACGGCTATCGGAGGTGCTATCTTCAACTGCCAGGGCGAGTCAGAAGCTTCAACCCTCAGCTTCTTCCTCAAAGTCTCCCGAACCTGAAATAGATTATTTCGATTTTCCAATGGGAAAGTCCGGCAAATTCAACCACGTTTAA
Protein Sequence: MATWDGSDQAGPPDDPNFYLFAHATNAAANPQTWDYYSTAGNGGYSHGSMGIYAQNNLPTVTQTYQAPSYQESLFAPVVENTSAERACFFENNRPLQKLASFNSPRYSGPKHDNPLKTLHKHSNLHAGASEFVPTSKNSQKSSLTASYNGTDGQYNDYTSGNPQGSSHIFFSDNRNRSNDRRYDNTKNSNSHRGSYKPQRSRGFEQSYNGPRGNDSAVIAQEVPLGNSQAEDNAFRGSKAQRARNHGRFQNDRYSNQNRQQYEKSRLDRRKNTVDTWQNPTEIPKDHLVGKEEEQPRENANNHNSYGARGKWTRNDRRFTNERYLGSGKSHPGTNEYEEQSYEPQTPSNSSVAPRKEISHNREGDRLYRNDRVRGKQRDGSANFERTGNHDYDGHIDDRDLKFDRNRDEGKKSTDSRDDEQNWRQKDKVTPREFMPKKNYKKIDFDDDASQRERLTEQLNQGRLECLICCEYIRQNDPVWSCNNCYHVLHLKCLKKWAHSSQGENGWRCPACQNVSLTVPEIYFCFCGKARAPEWNRRDVAHSCGEICGRLRAKNNCVHKCTLLCHPGSCPECIAMVTRHCGCGRTSQSLKCSTTTLVVCEAICEKSLNCNIHICENKCHHGECGSCEKTLHQECHCGKHERDVTCTADVPPTYSCGEICDKLLACGNHRCKELCHPDDCGVCTLQPASVTHCCCGQTPLIVTRESCLDPIPTCEKVCAKKLKCGQPSDPHTCKMDCHPDDCPECELTTKVRCRCGNMDREIACKELRTKADDARCEKKCTKKRSCGKHKCNQPCCIDIEHICPMPCSKTLSCGRHRCQLCCHKGRCQPCQEMSFDELHCECGASVIYPPVACGTRRPTCNRPCTRQHACDHEVLHNCHSDPSCPPCTVLMQKWCYGKHELRKAVPCHVNEISCGLPCSKPISCGRHKCITLCHSGACEKPGQVCTQPCTAPREMCGHICAAPCHEGKCPDTPCKEMVKVTCTCGHRSTTRACAENSRDFQRIASGILASKMADMQLGHSVDLEEVFGQGAKKLNQLKTLECNDECKIIARNTRIALGLQIVNPDVSGKLMPRYTESMKQWAKKDPHFCKMVHDRLTELVQLAKTSKQKSRSYSFDSMNRDKRNFIHEMCEHFGCESQAYDKEPKRNVVATAVKDKCWLPAYSLLEIVQRENGQRKVPRPMLNSSKPNSTLRLSEVLSSTARASQKLQPSASSSKSPEPEIDYFDFPMGKSGKFNHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00343553;
90% Identity: iTF_00343553;
80% Identity: -