Tlin025913.1
Basic Information
- Insect
- Tromatobia lineatoria
- Gene Symbol
- Gata3
- Assembly
- GCA_949699805.1
- Location
- OX453050.1:6608335-6620350[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-19 8.4e-16 58.1 4.7 1 35 361 394 361 395 0.98 2 2 0.53 2.1e+03 -0.8 0.2 19 26 550 557 545 558 0.70
Sequence Information
- Coding Sequence
- ATGTCGAGTAGCGGTGTAACGAGTGCACCAGTGAGCCAAGTATGTCGTCCACACTTTCACGGCTCGGTGCTGCATCCTTGGTTATCGGGCACGAGTGGAGACGCGTCGAAACCCTGGGGTTTCCCAGCGACGACGGCGTCGACGGGAGGTGGCGCAGGGGGCGAGGACAAACCTCAGAGTCCATTGGGCTCGTCGCTTCCGCCAACCTCGGGAAGTCTGTCGAGTCACGGCGGAGCCGGTGCTGCCGGCGGTCACCATCTATTCTCCTTTCCACCAACGCCACCCAAGGACGCGACGCCGGATAGCATAACGACAAGCACGTCCTCCAGcgcaaacaacaacaacaacaataacaacaacagtTCTGCCAGCAATAACAACAACAGCTCGAATGGAATGAGCCTGGGAGGCGGTAGCAGCGAGTACCAAGCGGCTGTTGCCGTAATGGGAGCTTTCATGCATCATCAGGACGCTTTGGGAGCGACTTCCGGTGGTTCCTGCGACGTTAAGCCCTCGGTTATGCTGGGACATCATCATGGGGCACCTTCACCGCCACATCAGCACAACGGCGGGAATGGAAGCTCGGGCGGTCAAGTTAAGCAACGCGAAGGTAATAACCAAACGGGCACGGGGAACGGAGCTTCCGGGGGCGCCGGAAACAACTCTGTCAACGGCGGTGGTGGCCAGTCGAGCCAGCAAGCGAACGCCacccagcaacagcagcaggatTACCAGAATCCGGGTGGCGCTACTTCGCCCTCGTGCAGGGATTCCTATCATCCGGCATCCCATCATCACCACCATCATCACGCAACCTCGGGATCCCAGTACGATCCTACCGCGACCGCTTACAACATGTACCAACACCTACAGTATCCCACCCATCACTCTCACAACCCTCACAACGGATCCTCCCTATTCTCCGGTTCGCATCACGCTACCACTGGCGTCACTGGCGTTAGTCCCGAATCAAAACTCCTCGGTTCCTCACACGGCAACACGCCCAATTCGCCCGGTTcccaacaacagcagcagcaaaagccgAGGAACAAGTCCAGAACGTCCGCCGaGGGTCGCGAGTGCGTCAACTGCGGAGCAACGTCAACGCCCCTTTGGCGACGGGACGGCACCGGTCACTACCTCTGCAACGCTTGTGGACTTTACTACAAGATGAACGGACAAAACAGGCCGCTCATCAAGCCCAAGAGACGCCTGCTGAGGATTCTCGCGGCGGATTCAGCGAGCAACGCTAGTTCTCTCTTGATACAGCGTTCGCTGCTTGTGGCAGAcGAGCATTCGATAATCGATTCATCGCGAAGAAGCGCGGAAAAAAGAGAGGAGAAAGAGATTCGTGAACGCCCACAACGTGAGCTGACCGCCGCGCTCGTGTCTAGTGAAATCCAGCAAGGGAGAAGCGGAGACTTCAGCGACAAGACCGTCTGGACGTTATTTACGAGACAGTTGCAAAGAGAGACGAAACGCACACGCGCAAACACTCTTTGCAGCGAGATTCACAGTCTGTCCTTCGCTCCAGCGAAGAGACATGCAGTGTGTCCGTTCACTGACCAAGCTTCTCTCGTGCCAGAGTCGACGAATTCGCGGGAGACTCCCGTCGCGATCGCTGCAAGGCAAAAGAGAGCGCGAGACGCGACTGAATTATGTACCAGATGCAAATAG
- Protein Sequence
- MSSSGVTSAPVSQVCRPHFHGSVLHPWLSGTSGDASKPWGFPATTASTGGGAGGEDKPQSPLGSSLPPTSGSLSSHGGAGAAGGHHLFSFPPTPPKDATPDSITTSTSSSANNNNNNNNNSSASNNNNSSNGMSLGGGSSEYQAAVAVMGAFMHHQDALGATSGGSCDVKPSVMLGHHHGAPSPPHQHNGGNGSSGGQVKQREGNNQTGTGNGASGGAGNNSVNGGGGQSSQQANATQQQQQDYQNPGGATSPSCRDSYHPASHHHHHHHATSGSQYDPTATAYNMYQHLQYPTHHSHNPHNGSSLFSGSHHATTGVTGVSPESKLLGSSHGNTPNSPGSQQQQQQKPRNKSRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLLRILAADSASNASSLLIQRSLLVADEHSIIDSSRRSAEKREEKEIRERPQRELTAALVSSEIQQGRSGDFSDKTVWTLFTRQLQRETKRTRANTLCSEIHSLSFAPAKRHAVCPFTDQASLVPESTNSRETPVAIAARQKRARDATELCTRCK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -