Basic Information

Insect: Tromatobia lineatoria
Gene Symbol: Mtf1
Assembly: GCA_949699805.1
Location: OX453043.1:9087143-9094900[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 1e-05 0.0013 19.8 0.6 1 23 125 149 125 149 0.98

2 6 0.0003 0.038 15.2 0.2 1 23 155 179 155 179 0.96

3 6 0.00027 0.035 15.3 1.8 1 23 185 209 185 209 0.97

4 6 1.5e-05 0.002 19.3 1.0 1 23 214 238 214 238 0.96

5 6 4e-05 0.0052 18.0 4.3 1 23 244 268 244 268 0.98

6 6 0.0005 0.064 14.5 4.6 1 23 274 298 274 298 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	1e-05	0.0013	19.8	0.6	1	23	125	149	125	149	0.98
2	6	0.0003	0.038	15.2	0.2	1	23	155	179	155	179	0.96
3	6	0.00027	0.035	15.3	1.8	1	23	185	209	185	209	0.97
4	6	1.5e-05	0.002	19.3	1.0	1	23	214	238	214	238	0.96
5	6	4e-05	0.0052	18.0	4.3	1	23	244	268	244	268	0.98
6	6	0.0005	0.064	14.5	4.6	1	23	274	298	274	298	0.93

Sequence Information

Coding Sequence: ATGGCGACGTGGGAAAGTGAAAAATTCGGTGAGGTTGGAAATGTCGAGGGGATTGAAGCTAACTTCGATGGGATTCTCGTCACTCACGATCTACAAGACTGCCTTGACGACAGTCTCGATCTCTCGAGCTTCGGCAGAGCTTACGAGCAATCGGCGGTATTCGATTATGGAAAATACTCCGACGAGGATAAGCCGTCCACCGTCAAGCTACCCGATGACAGTACGGGGTATATTCATCACACGATCAGTCCGAATGAGATTTATATGCGCATACATCCTGGCCAGGATGACTCTATGCCGGATGATCCTTCGCACGCAACGATCACTATCGAAAGTACAGATCCCGATACCAATCAGAAGCATATCAGCCGTTACGAGTGCGAGTACGATGGATGTTCCCGCACTTACAGTACGGTCGGCAATCTCAGAACTCACATGAAAACGCACAAAGGCGAATATCGATTTAAATGCGCGGAAGCAAGTTGCGGCAAGGCATTTCTCACATCGTACAGCCTAAAGATCCACATTAGGGTACACACAAAAGTAAAACCATTCGAATGCAGTCACAATGGGTGTGAGAAGGCGTTCAATACGCTTTATAGACTGAGAGCTCACCAAAGACTTCACAGTGGTAATACCTTCAACTGCGAGGAAACGGGATGCGTTAAGTTCTTCACTACACTTAGCGATCTCAAGAAACACGTCCGTACCCACACTCAAGAACGACCATACAAGTGCAGGGAGGAGGGCTGTGGCAAAGCGTTCACAGCATCTCATCATTTGAAAACTCACAAACGGACGCATACCGGTGAACGACCTTACATATGCGCACACGAAAATTGTCAGAGATCTTTCACAACTCTTCACAGTTTGAAGAGTCACCTAAAAACACATAAAAGATTAATGGCTAACGGAGAATCGAAGCACAAGATCCCAAGTACCCAGTTAGCAAATGCAGACGACAGTTCGTCAAATCTTGCAAAACACGAATGCGCAGAAATAGCAAATCCTGAAAGAGCAAACGTGCCAACATTTACGATCCTTCCTATGAATTCGTCCGAAGTGCAGAGCAACGAAACTATAACGTACCTTCCGAACGAATCACACAAAATCACAAGCGATTCTTTGGTAAACGCTTTCAGCGGTGAAGTAAGTTTCGACATAGCGCATCCTGAACCGCATCTAATGAGCAGCGGTAGCAGCAGTGCCAAGATATCCCCGGAAGTTCGTACATCCGATGGCATAACTTACCTCACAGTAAACAATATAATAGGGAACGAAACAATCGCCGATTTCAGCAGCACCGAAGATTACGAAAAGCTCAAGATATTCAATCAATTAACCAATGACGACAGAACGGAAAACATGTCCAACATACCAAAGACTACGAACGAACAAATCGAAGACTCGTCTTCGGAATCTGACGGATTGAATTtgcagcaaaaaataatgaaagacgGACTCCAAAAGACAATCGCTCAGTTGTCGGAGGTCAAAGATGTAGTTGAAGATACTGAACGATATAAATCAGTCTCAGTCTCCGATCAAAATGCCTTTGCACATGCCATTGATAACGCTGCGAGTGCTACagagaaaaatgatgaaaatcagtTATTCTCTAATTCAGTACTCGATGCTTTGCCTTTCCAAAACGATACCGCCAACCTGATTAACACAGTGGGCACATCAATTACAGAATCAGTCGTTAACAACGAGCCTTCTGAAGCTGTAGAATTGGCTATAGCGTCAGAGGAAGAGATGCCATCGCCATGGATCGACGTAATGGCACTCGCAACCGCACCAGCTTTGAGAACCCAATCTTGGTCGGAACTCAATGCTTTCCCAACTGCAGTTCATTCGCTCGTTGATCTTGTTGGTCCAGAACCATATCCTCTCCATCTTGAAAATCAGCTTCAAAGCGCAGCGGAAACTCTCGACACAGTGGCACTCGCTGCTTCTAAGCCTATTTGCGATCTGCCGATAATACTTCCGCCGGATAAAGTCGACGAAGAACTTCCGAAAGTTCTGAGCGCAAAGAATAAGAGAGATAGAAATGTCCTGCAAGAAATAACGGCGGATGCTGATATATGCAGGTGTACGGATTGCAAGTGTGATCATCTTAAGAATTGCCAAAATTGCACGAGTCCCCCGGAAACGCCGGtagtaaataataagaaagccgAATCCCAACTACAAATTGTCAGCGAGATTGTCTCGTGTCTGCAAAGCGAATGTCCTTGTGAAGGCGATGGCTCCGGTGGATGCGGCTCTTGTTGCGTTGTCATTTGTCTCAAGACATTGCAACAATTGCAACGAGTATTCAACAATAGAAATTGTTGCAGAGAGGCGAGCAGATCGACGTGCTGCAAGGATAAAACATCCGAACGAGCAAACTCTGCTTTTGGGTTGATCAAGAGCCAAGTGGCTAACAATCAATGA
Protein Sequence: MATWESEKFGEVGNVEGIEANFDGILVTHDLQDCLDDSLDLSSFGRAYEQSAVFDYGKYSDEDKPSTVKLPDDSTGYIHHTISPNEIYMRIHPGQDDSMPDDPSHATITIESTDPDTNQKHISRYECEYDGCSRTYSTVGNLRTHMKTHKGEYRFKCAEASCGKAFLTSYSLKIHIRVHTKVKPFECSHNGCEKAFNTLYRLRAHQRLHSGNTFNCEETGCVKFFTTLSDLKKHVRTHTQERPYKCREEGCGKAFTASHHLKTHKRTHTGERPYICAHENCQRSFTTLHSLKSHLKTHKRLMANGESKHKIPSTQLANADDSSSNLAKHECAEIANPERANVPTFTILPMNSSEVQSNETITYLPNESHKITSDSLVNAFSGEVSFDIAHPEPHLMSSGSSSAKISPEVRTSDGITYLTVNNIIGNETIADFSSTEDYEKLKIFNQLTNDDRTENMSNIPKTTNEQIEDSSSESDGLNLQQKIMKDGLQKTIAQLSEVKDVVEDTERYKSVSVSDQNAFAHAIDNAASATEKNDENQLFSNSVLDALPFQNDTANLINTVGTSITESVVNNEPSEAVELAIASEEEMPSPWIDVMALATAPALRTQSWSELNAFPTAVHSLVDLVGPEPYPLHLENQLQSAAETLDTVALAASKPICDLPIILPPDKVDEELPKVLSAKNKRDRNVLQEITADADICRCTDCKCDHLKNCQNCTSPPETPVVNNKKAESQLQIVSEIVSCLQSECPCEGDGSGGCGSCCVVICLKTLQQLQRVFNNRNCCREASRSTCCKDKTSERANSAFGLIKSQVANNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00343437; iTF_00653135; iTF_01207663; iTF_00414614;
90% Identity: iTF_00343437; iTF_00653135;
80% Identity: -