Tlin006908.1
Basic Information
- Insect
- Tromatobia lineatoria
- Gene Symbol
- CSRNP3
- Assembly
- GCA_949699805.1
- Location
- OX453037.1:5115509-5125663[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-100 4.5e-96 321.8 7.8 2 218 738 947 737 947 0.91
Sequence Information
- Coding Sequence
- ATGGAATCGTCTTCGGCACAGGATCTTCCTCCCGTCGAGGCCCAAGAGGATTCCAGCTCAGTTGACGAAAACCCAACGTCAGAGCCTCTGAAATCTTCACCGGGGCCGACGAAGGAAGCTGAAGAAGTTGTCCTTGAGGAAAAGGATGAAAATCCGGTGCGGGAAAACTCACTGAGCCTGGAAATCGCTTCGAGGCTGTGCTGTGACGATTCGTCGATCGAAACGAAGCCCGAGGATATTCCTGGATGTTCCGAGGATTCTGCGAGCCTCCGAAAGCCTCTTCTAGTACTGCTCCCTGGACAACCGGAAAACCCTGGATCTTCTTCGAGTCTAGAGAGCGATTTGGTGATAAAAGAGGAAACCGATTTATACAACGTCGATAAAATCTACGaagacaactttttttccgatgaATTGCGAGCCACTTCTTCCAGTGAGTCAACACCTTCTAGAAAACGATCTGCCCCTGAATTTCTGCCTATCAACGCCGAGATCAAGAGAATCGGCGTTGAAATATCCGAGGAACATGCCAAGCAGCTGAAGAATGACATCAGAAGGCTATCGCCTGTTTTGGTTAGCCTTCGTGAACGAACCttgggcgaaatttcattgacttCGGATTCAGGACTCTTCGAGGATGATAATCAGTCGATTAAGGTCGAAATAAAAGAAGAGCCTATGGAAGATCCtcttaaaacttcgcatttagATGGTCACAGTTCTGGTGCAGTTTTTAAGGATTCCAGCCTGACAAGAGGCAATTTCTCTTGCAAGGAACTTAGCGCAATCGTTGACTGTCAACAGGATTCCTCGGAAGGTTCAAATTCTTCGGGAAACACGGTTAAAAGTGACAGCGAGTTGACAGTGAATTCAGAAGCGAATGAAGAGTCTAAAACTCCAGACAGTTGCGAATCTAGGCTCGGGAATGACgttaaaaacgttgaaaatCTTGGCAGTCCTTCGAGAAGAAGCTGCGATTCCGTCGAAaccgaaaatttttcgtcaaccTCCGAAGAATCGTCCGACGAGAGGCTAAACCGTCAGCGTAAACTCTTGATAGTGTTGTCGCGAGTTGATGACGATAGTGCTGAATCagaaatcattgaatcaacgGCAAAAGAGGATCTGAATGGAAGAAGTGAAAGTAAAGGTGCTGAGGTTGAGAGCATCGAAGAGAGAACTGTCTTAGTTTGTGGAGTCGACGAGAAAACTGACAGTGTTTTGAAGAATGATGAAAGGTTCGTCGATAAAACTGGCCAAGTTTTGCAGGAAAACGAAGAGATAGTAATTGAGTGCAGTGAGAAGAACAATTTGGTGCTTGGTGGGGATTTTTGTCTGTCACCGAAGTACCTTAAAAATGATCAGTTGTCTCGGAAGAGCCCGAAAGTCGTGATCGAGAGAACGCTCGAAAGTGTTTCTGCGTCACCGGTGAAAAGTTCTGCCGATGATAATGTCCCAGGGATCGAAGCTTCGAACAATCTTGATGGTGTTCGGAGAACTTTGGCAGACAGCTTGAACGAATCTAATGACGAAGATGCTGAAGATGCCGCTACGAGTGATCTTTCGGCCAATGAAGAAGATCCTCTGCGGCTGGAATCACCTGATGTAGTCGCTGAGCCGTCGAATGAACTCCAAGAACCTGGAGACACCGAAACTGAAACGGAAACCGGTTCGGACAGCTCGGAACTCAATTCCATGACGTCCATCAATCTCAGCGATTGCGTAGAACCGGTAAACAGTGCCTCTTCCTGTCCAGAGACAGATTCTGTCGTGTCCGATGAAGTCCCATCCGAAATAATAACGAGACTCGAACCTGAAAGACCCGAGGCCTTCACCGAAGACTCCGCTGAGAGTCTCGCTCTTGCAACTGGTGCTAGAGACGAAGTCAGGTCCGATGGGAGCGATTCTGGACTCGGAAGCGAAATTCCTGGGGATCCTGGACCTGCTCCTGCTCCTGAAAGCGATTCTGAAACTTCGTTTCTCGACAGAATTCCTGATGATATTCTTTCTGATAAAGATAAAGCAGTAAATCCACTGGAAGCCTTTGTCCCGGACGCCGGTACGTCGGGAACTCAGccgcaacagcaacaacagcagatACCGCTACCAACTTTCCCAAGTCCTCCAAAAAGCAGCCTCAAACGAAGGCTCACCGATTGCATGGAAGGCGAACCGAGTCCCAAGAGAATTAACACTGAGGATCCCATGAGGAAGAAACGAAACATTCAGTTTGACGCTGTCACTGTTTATTACTTCCCCAGGTCTCAGGGATTTACTTGTGTGCCTTCTCAGgGTGGCAGTACACTTGGAATGAGCGCAACGCACACGCACGCTGAACGGTTTTCTTTGGCAGAGCATGCAACAGAGCAGAGGCGGATTCATCGCGCAAGACTAGCTCAGTTGAGGTCGGAAAGGGCGGCTAATTGCGTGACGGAAGCGGCCTCGAGCTCCGAGGATCCGAGCGATGACACCGACGAGGAACCCAGCGATATCGAGGAGCTTGACATCGACAGCTATTACTTTCTTCAACCAGTTCCGACGTGGCAACGAAGGGCACTGCTTAGGGCTGCAGGAGTCAGAAGGATAGACGCTGTTGAGAAGGACGAGTGTCGGGATATCCGAGCAAGCAGAGAACACTGCGGATGTGGGTGCAAGGGTTACTGCGATCCCGAGAGCTGTCCGTGCTCGAGAGCCAACGTTAAATGTCAGGTCGATCGAGCGGGATTCCCTTGCGGTTGTTCCCGCGACGGTTGTGCAAACAGTTCAGGCCGAATAGAGTTCAACCCGGTGCGTGTGCGAACGCACTTCATCCACACATTGATGCGTCTCCAGTTGGAAAAGAAGCAACGAGACGAGGATCGTACGGATCACGAATTATTGGTGAACAATCAAACGGGTCGTGGTCCAATGCGAGAAGTCCCCGTGATGTTGCCCAGCGGTTTGGGCCCAATGGACCATCCAAACGTAATTACAGGTGACCCGGTATCCTGTATAAACGCCGGAGGATTCACGACTCTTCATTACGACAGCCACGAGACAAGCGCCGCTTCCTGCCAGCCAATCGTTCATGGAGGCCGAGAGGATAGTCTCGACCTTTACGCTATCAGAGACGATTGTTATCCCGCGGATAGCGAGGCCGTTGTCGTCGACACCGCTCAAAATTCCCAACGTAAGCTTCATCCAGAATTCGGACAGGCTTTTCAGTCGTTTCCGGGCCAACAGCCCGCAGTAACTTTTCCTCAAGGTGCTTATCAAGACTATCAAGGCTATCAGAATCTCGCGTCGACCTCCAGATCACAATTTCAACCCCAATTTCAAGCGATACCTCCTCCAGCCAATTCAGGATTTTCGCATTATGCCTACGGACAGGATCCCAATGTAATGCAATCCGCTTGTCAACCTCACGCGGCGCCTTCTCATCATCACACGGTCTACGAAACGCCTTTTCCGCAAGAAGATCCAACCGCTACGCAGCAACAATACACCAATTTAAATTCCGTTCAACCGATGAACGCTGTCGTTCAACAAATGGGAAAATTGGAACCTTTTTCCGAACTTCTAGCCGGAAGATATTCTTACTACGGCGAAGTTGAGCCTCAGCCAATCGGCGTTTATCACAGCAATGGCAGCGCCAAAATTGAGCCTGAAAAGAGTCCAAACGTTGTTCAACAACCCGCTGAAACTGGGAGCGAAGATTGCGACGAAAATTTTGGGGAAATCATCAAGAAATCTATGGTTGAGACTGTTTCAGCTTGA
- Protein Sequence
- MESSSAQDLPPVEAQEDSSSVDENPTSEPLKSSPGPTKEAEEVVLEEKDENPVRENSLSLEIASRLCCDDSSIETKPEDIPGCSEDSASLRKPLLVLLPGQPENPGSSSSLESDLVIKEETDLYNVDKIYEDNFFSDELRATSSSESTPSRKRSAPEFLPINAEIKRIGVEISEEHAKQLKNDIRRLSPVLVSLRERTLGEISLTSDSGLFEDDNQSIKVEIKEEPMEDPLKTSHLDGHSSGAVFKDSSLTRGNFSCKELSAIVDCQQDSSEGSNSSGNTVKSDSELTVNSEANEESKTPDSCESRLGNDVKNVENLGSPSRRSCDSVETENFSSTSEESSDERLNRQRKLLIVLSRVDDDSAESEIIESTAKEDLNGRSESKGAEVESIEERTVLVCGVDEKTDSVLKNDERFVDKTGQVLQENEEIVIECSEKNNLVLGGDFCLSPKYLKNDQLSRKSPKVVIERTLESVSASPVKSSADDNVPGIEASNNLDGVRRTLADSLNESNDEDAEDAATSDLSANEEDPLRLESPDVVAEPSNELQEPGDTETETETGSDSSELNSMTSINLSDCVEPVNSASSCPETDSVVSDEVPSEIITRLEPERPEAFTEDSAESLALATGARDEVRSDGSDSGLGSEIPGDPGPAPAPESDSETSFLDRIPDDILSDKDKAVNPLEAFVPDAGTSGTQPQQQQQQIPLPTFPSPPKSSLKRRLTDCMEGEPSPKRINTEDPMRKKRNIQFDAVTVYYFPRSQGFTCVPSQGGSTLGMSATHTHAERFSLAEHATEQRRIHRARLAQLRSERAANCVTEAASSSEDPSDDTDEEPSDIEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCSRDGCANSSGRIEFNPVRVRTHFIHTLMRLQLEKKQRDEDRTDHELLVNNQTGRGPMREVPVMLPSGLGPMDHPNVITGDPVSCINAGGFTTLHYDSHETSAASCQPIVHGGREDSLDLYAIRDDCYPADSEAVVVDTAQNSQRKLHPEFGQAFQSFPGQQPAVTFPQGAYQDYQGYQNLASTSRSQFQPQFQAIPPPANSGFSHYAYGQDPNVMQSACQPHAAPSHHHTVYETPFPQEDPTATQQQYTNLNSVQPMNAVVQQMGKLEPFSELLAGRYSYYGEVEPQPIGVYHSNGSAKIEPEKSPNVVQQPAETGSEDCDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00343173;
- 90% Identity
- -
- 80% Identity
- -