Tlin012644.1
Basic Information
- Insect
- Tromatobia lineatoria
- Gene Symbol
- CAMTA2
- Assembly
- GCA_949699805.1
- Location
- OX453040.1:2708004-2721541[+]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7e-45 2.1e-40 137.8 0.3 9 116 3 108 1 108 0.98 2 2 1 3.2e+04 -4.6 2.1 20 24 277 281 254 307 0.53
Sequence Information
- Coding Sequence
- ATGTGTCCGCAGGAAATCGCCGCGATCCTGATAAGCTTTCAGAGGCACGGAGAATGGCAGAGTCGCGAGGTGAAGGTCAGACCTCGAAGCGGTTCGATGCTTCTCTACTCACGGAAGAAGGTACGCTACCGGCGCGATGGTTACTGCTGGAAGAAGCGAAAAGATGGCAAAACTACGCGGGAAGATCACATGAAACTAAAGGTTCAGGGCGTCGAGTGTATTTACGGTTGTTACGTACACTCGGCGATACTACCGACGTTTCATCGGCGATGTTACTGGCTTCTTCAGAATCCAGATGTCGTCCTCGTCCATTATTTGAACGTTCCTTATCCAGACGGAGATGCCAAATTGGCAGCGTTACCGCCATGTCTAGCTCTGCCACCTGACAAGAAGGAATGGACGCGAGACGAGCTCGCATCTCAACTCAGGCCAATGTTCCTCGGCGGCGATGACGATCCGAACAATCCTCATCTCACTCAACACTCGAGTCATCCCGTCGACATGATAGTCTCGCAGTTGCTGGACAGGCAAAGGGCCTCCACAACAAATTCAACGACAGGTGCTCAGCTTGCACCACGAAGGCTCACACCCGACAATCAGGTTACTTCGACGACCGGGGGTCAGCAGCCCTCGTCGACGGCCGCTACTGCACCCCGCGTATACTCAAGACATTCCCACTCGACGCAGAGTCAACAGCCGGCTCCTCTAGTTTTAAGTCTACAGCAGATACAAGGCGGAGGCGGCCTCTTAATACTCAACAGTCAGCCATATCATcatcagcaacaacagcagcagcagcagcaacaacaacagcagcagcaacagcaacagcagcagcaacagcaacagcaacagcagcagcaacagcaacaacaacagggTCAACAGGTAGAAATGCAGCAGGTCAACGATCAACAGCAGATCGTTCAGCAAACGAGCGTAGATCGTGAACAACAGACTCATCAAGAAATAGACGCTCAGGAAAGCGTCGTTGAGAGATCGGGCGTTCAAACGATCACCAATTCCGCTGGTAATGCCACTGGAGTCGCTGATTTTGCTGAAACTCTGGATCTAAGTCAGGAGGACATACAAAGAACCTTGTCAGCGAATATGGTGCCACCTTCGCCGTCCCCGTCTCCCGCCGACAACCACATTATCAATCCTATGGACTTCATCGACTCGTCCgatgattttcatgtaaatctTGACGCATTTGATGTTTTCGGTGACCTGCCCGAGCTTCACGACTTTGATACCGAACACACGAAGCCCGATGACAGATCCGGAGGCCAAAACGACGCGGGATGTCATCCTGGGGCTACTGTACATATTGCTGAGTACAGTCCGGAGTGGAGTTACACAGAGGGAGGAGTTAAGGTTTTGGTAGCTGGTCCTTGGACCGGCGGCAGTGGCTCGCAATCTTATTCAGTGCTGTTTGACGCTGAGCCAGTCGAGGCTTGCCTTGTACAACCTGGAGTGTTGCGCTGTCGGTGTCCCGCACACGCTCCTGGCATTGCGTCCTTACAAGTTGCCTGTGATGGTTTCGTGGTGTCCGATAGCGTCGCTTTCGAGTATCGCAGGGCACCCGCAACCGAACCCAGTTCCGAAAGGGCACTCCTCGATCGTCTTGCTGACGTGGAAGCTCGTCTTCAGGGTCCCGGACCTCCGTCGCCTGCGGCTCATCTTGAAGAGCGTCTCGTAGCTTACTGTCAGGATGCCGTTGTCCGTCCTTGGCGTGCCGGAGCCGAACCCCTACAATCGGGAGGTCCTACACTCCTTCATTTAGCAGCGGGCTTAGGATATTCCAGGTTGGCTTGTGCGCTGCTTCACTGGAGAGCAGAAAATCCTAGCAGTGTTCTCGACGCGGAAGTCGATGCCCTGAGGCAGGACGCAGCTGGACTGACGCCACTCGCCTGGGCCTGTGCTGCTGGCCATGCAGATACTGCGACAATCCTCTATAGGTGGAACGCGATGGCACTGCGCGTACGAGATTGTCAGAACAGAACGGCGACCGAATTGGCGGCGGAGAATGGTCACACGGGAATATCCGAAGAGTTGAATCGTTTGGAAGCGAGACGACAGGACGAGAGACTTTTCTTGAGACCGGCGAGCCCGAGTCCGAGACGGCCCTCCCAAGACAGCGGTCTCGATTTGGCGCTGTGTGGTTCTCCGCTCCTGGACAACATGGAGTTGTTGCAAGAGGATGAATCGTCGTTAGGCCTCGGTCAGCAGGGAATGGAGAGTTCTACGACCCCCCAATCGTCCGTAGGGGAGGAAGACGCACGGGTCCTCACATTGGCCGAGCAAATTATCGCCGCACTTCCCGAGAGGATCAAGAGAGGAGAGGGTGATCCTTCGTCCCCGTCTCTGCCGCCCTCACCGCCACCACCGTTAACGCCACTCGAGGATGCTCTCATGGAGCAGATGCCTCTGGATTCCGGGGAGCTGTTCGACTCGTACCGAGACTGCACAGGAGGCGCGGCATCGGTATCGGACGTCGACGCCGATGCGAGTCCATCGAGTCCGTCAAGCAGTTGTCTCACCCCCGACTCGCCGTCCCCACCGCCAACGACCGCCGACTTCTGCGAGTTTCTTCAGCTCCAACTGCAGCTCGACGGTGGCAACGCTCATAACAATAATTACGGGTACGCCAACGGCGAGCGAGGTGGCATCGGTATCGGCGGTGCGGGTAACGGAGATGGGAGCGAGGCTGACTTGAGCAGGCTCACGCTGTCGGACAGGGAGCAGAGAGAGCTTTATCAGGCCGCAAGGATGATTCAGAAGGCCTACAGGAGTTACAAAGGACGCCAGAGACAAGAGGAGGCTGAGAGACACGCGGCGGTTCTCATACAGCAGTACTATAGACGTCACAAGCAGTACGCTTATTACAGACAAGCCACGAAGGCCGCGGTGGTGATTCAGAGCAACTACCGTAGTTACCGTGCACGACCCGGCTCCACGAGCTCGAGACAGCAATCCGTTCATCAACAAGCCGCCCATCAGGCTGCTAGGAAGATCCAACAGTTCATGCGACAATCCAAGATCAAaCTGCAGAACGCCAGGGCCGTCGCAAGCGGGAGCGGGAGGCCGCAGGTGCTCACTTCACGGGGGGCTGTTGTCCCCCAAAGCTCGCCCTCATCTAGCCCAGGGGCCAGCCTAGTAGCCGCCAGCCCAGAGACCACTTAA
- Protein Sequence
- MCPQEIAAILISFQRHGEWQSREVKVRPRSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGVECIYGCYVHSAILPTFHRRCYWLLQNPDVVLVHYLNVPYPDGDAKLAALPPCLALPPDKKEWTRDELASQLRPMFLGGDDDPNNPHLTQHSSHPVDMIVSQLLDRQRASTTNSTTGAQLAPRRLTPDNQVTSTTGGQQPSSTAATAPRVYSRHSHSTQSQQPAPLVLSLQQIQGGGGLLILNSQPYHHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQGQQVEMQQVNDQQQIVQQTSVDREQQTHQEIDAQESVVERSGVQTITNSAGNATGVADFAETLDLSQEDIQRTLSANMVPPSPSPSPADNHIINPMDFIDSSDDFHVNLDAFDVFGDLPELHDFDTEHTKPDDRSGGQNDAGCHPGATVHIAEYSPEWSYTEGGVKVLVAGPWTGGSGSQSYSVLFDAEPVEACLVQPGVLRCRCPAHAPGIASLQVACDGFVVSDSVAFEYRRAPATEPSSERALLDRLADVEARLQGPGPPSPAAHLEERLVAYCQDAVVRPWRAGAEPLQSGGPTLLHLAAGLGYSRLACALLHWRAENPSSVLDAEVDALRQDAAGLTPLAWACAAGHADTATILYRWNAMALRVRDCQNRTATELAAENGHTGISEELNRLEARRQDERLFLRPASPSPRRPSQDSGLDLALCGSPLLDNMELLQEDESSLGLGQQGMESSTTPQSSVGEEDARVLTLAEQIIAALPERIKRGEGDPSSPSLPPSPPPPLTPLEDALMEQMPLDSGELFDSYRDCTGGAASVSDVDADASPSSPSSSCLTPDSPSPPPTTADFCEFLQLQLQLDGGNAHNNNYGYANGERGGIGIGGAGNGDGSEADLSRLTLSDREQRELYQAARMIQKAYRSYKGRQRQEEAERHAAVLIQQYYRRHKQYAYYRQATKAAVVIQSNYRSYRARPGSTSSRQQSVHQQAAHQAARKIQQFMRQSKIKLQNARAVASGSGRPQVLTSRGAVVPQSSPSSSPGASLVAASPETT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00393592;
- 90% Identity
- iTF_00841066;
- 80% Identity
- -