Tlin015281.1
Basic Information
- Insect
- Tromatobia lineatoria
- Gene Symbol
- cdc5l
- Assembly
- GCA_949699805.1
- Location
- OX453041.1:16061208-16064238[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.4e-13 9.6e-10 39.2 0.2 4 44 11 52 9 54 0.97 2 3 8.5 1.3e+04 -2.8 0.0 23 38 82 95 79 96 0.61 3 3 7.7 1.2e+04 -2.7 0.0 21 26 144 149 141 150 0.77
Sequence Information
- Coding Sequence
- ATGCcacgtgtaaaaataaacggtGTTATTTGGACCAGAGCTCAGGAGAGAATTCTGAAAGTTGGTGTTTTGCGATACGGGCTAAATCAGTGGGAGCGAATAGTTCTACTTCTTCCGGGAAAAACAGTCCAGCAGTGCAAAGATCGATGGGAGAATGGACTGAAAGAAAGCGTCGAAAAGATGAAATCGACTTCGAGTAGATGTGATCGACGCTTGCGCGTTGCTATTACTATGCCAGCGCCATGGCATGAAATAGCTACAACGGAACGAACGGCCGTCAATTGCGTCATCGGATACGATTATTCAACAAGTCAAAAGCAGATGAAGGAGGAACGTGACGATGATGGGCAAGGAGAACTAGACCCAGCGGAAATCCTACCAGGTCAAGTTTACGCAGATCCGCGATACAATTTTGAAGATGGTAGTTACGAAGACTGGAAAAAGGTTCCATGTGGGATTTCCCCAGTGCCCAGCTGCGGAAAATATCCGAGAGACGCAATGTCCGTGAGAAGCGATTGGCTGTTGCTCTTCGCTTTGCCTCTATCCGAAGACGGCGCGAGCGAAGAAGGAAGAATTTGA
- Protein Sequence
- MPRVKINGVIWTRAQERILKVGVLRYGLNQWERIVLLLPGKTVQQCKDRWENGLKESVEKMKSTSSRCDRRLRVAITMPAPWHEIATTERTAVNCVIGYDYSTSQKQMKEERDDDGQGELDPAEILPGQVYADPRYNFEDGSYEDWKKVPCGISPVPSCGKYPRDAMSVRSDWLLLFALPLSEDGASEEGRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -