Tlin015218.1
Basic Information
- Insect
- Tromatobia lineatoria
- Gene Symbol
- cdc5l
- Assembly
- GCA_949699805.1
- Location
- OX453041.1:15134913-15137456[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-14 4.6e-11 43.4 0.5 3 44 10 52 8 54 0.94 2 2 1.6e-08 2.5e-05 25.1 0.1 1 42 60 100 60 103 0.94
Sequence Information
- Coding Sequence
- ATGCCGcgaataatgataaaatgtaGTACCTGGCAAGACACAGAAGATAGGGTTCTTAAAGCAGCTGTTACggaatatggaaaaaattgcTGGAGTCGTATCGCATCGTTACTGCGTAGGAAATCGGCTAAGCAATGCAAAGCTCGCTGGTTTGACTGTCTCGACCCTAGCATCAAAAAGACAGAATGGAGCGCAGAGGAAAACGAGCAACTTTCTCATTTAGCAAAAATTATGCCTACACTGTGGCGGACAATTGCAGCAATTATCGGACGTACCGCTATGCAATGCATAGAACAATACGAATATTTATCGGCTCAGGCACAGATAAAGGAACAAGGAGATGCTGCGACCGATGATCCCAGAAGACTTAATCCTGGAGGAATTGATCCAAATTCAAAGAGCAATCCGGCTAAACCTGATTCTAAGGACAATCACGGAGATGAACTAGAAATGTTGCCAGGGGCGCGAGTCAGATTCGCTAATACCCAGAGTAAAAAATCGAAGAGTAAAGCTAGGAAAAAGAAGTTCCAGCAAACGTGTCGTTTAGCAGCGTTGCTAAAGCGTCGCGAATTAAGAGCTGCGGGAATCGCAGTCCACTGA
- Protein Sequence
- MPRIMIKCSTWQDTEDRVLKAAVTEYGKNCWSRIASLLRRKSAKQCKARWFDCLDPSIKKTEWSAEENEQLSHLAKIMPTLWRTIAAIIGRTAMQCIEQYEYLSAQAQIKEQGDAATDDPRRLNPGGIDPNSKSNPAKPDSKDNHGDELEMLPGARVRFANTQSKKSKSKARKKKFQQTCRLAALLKRRELRAAGIAVH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -