Tlin000262.2
Basic Information
- Insect
- Tromatobia lineatoria
- Gene Symbol
- Mblk-1
- Assembly
- GCA_949699805.1
- Location
- OX453034.1:1747096-1760733[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-17 1.3e-14 54.4 0.1 1 45 550 595 550 595 0.96 2 2 2.6e-17 2.7e-14 53.4 0.0 1 43 1024 1067 1024 1069 0.94
Sequence Information
- Coding Sequence
- ATGTGTTTGCATACTGCCCTCGAAGTAAGCGCCTTTCATTGTTACAACGCCCGGCACAGTCTGGAACGGGTAGCGGAAGAGTTGATGGGCCGTAGGAGATGGAAGCAATACCAGGACACCCTGTACAGCAGCACTCGGAGCGAATCAGCGACCCAGCCTCATCATCGGCTGTACCCGGGTCCTGGACTCTCGAACTCGTGCAATCTGGGTGGTGGGAGCCTGGGTCAGGTGGTGGCTCAACGTCCGCCATCGGGAATCTCCGCAATCGGAGGACCGTTGGCCCAGGGAgcatcgacgacgacgacaacgacgacgacgacgtcaacGACGAGTTCAACGACGACATCGTCCTCGAGTACAACGTCGTCATCGAGCGTAGGAACAGccacgacgacgacaacgataACGGGTTCGTCGCTCGATACCTCGACGAGGCTCAATCAGCTTCATCAACAAAATTCGGCACAACTTTTGGTGACGAATCATCGAGCAAGTCACAACAGCAGCAACGGCGGTGCTGGCGACCTCGAGGACGAACTTCAGCCGCGTCTGAGGCCCGAAGACATAAAGCTCGAAATCGAGGAGAGCGAAACGGCTTTACGCTCGGAATCCCTGCAGCAGCTGCACCGGCAAGTCCTCGCATCGTCCGGTCCTACGCAAAAGACCAACAATCAGACACAGAGGACGAGGGCGATAAAGGAAGAAGGACAGGAAGTCGAGGAGAGCGAGAACGGACCGGAGACGGGAGAGACGGGAGAGGCGATCGAGGGAGAAGCACAGAAGAGACTCAAACTTGCCGAGGAATCGACCCTCGTTGGGGTTACCACGCCGAGAAACTCGGTCAGCCCACTCAGGGACAACGAGACGAGGATATCGGCCAGGGAACAGGAGACTGGAACCAACGATCTCGTCGATACGATAGGGACCAAgGAACAGCAGACGGAGAAGCGGATAGAAGTACCGACGCCGGGTCTGCTGAGGGTAAAAAAGGAGGAAGAACTCCAGGAGGTGCCGCGGTCAGTGAGCTGTGGTGTCGATGCGGTAGCCATCGCGAGATTAGGAAATCCAGTGGAGGTCACGAATTCGGGAGCTTGCAAAGAGCCGGAAACGGTTGCGGAATCGAGTTTGCCGTATCTTGTGAATCGACGCGTCAGTCCACCAATCGAGGACTGGAAGCCACTCGACAAGTGTTACTTCTGTCTCGATGGAAAACTTCCCCACGACGAGCAGGCGCCCCTTAGTCCTCAAAGCGAGAGTAGTAGTAGTTCACGATCGGCAGAATCACCGATGTCGGTTCAGGTTGATCCGATGGCGGCTTCGGTGGTGGCTGCCGCCCTTGGCACTTATCCGACCCTACTGCCTCAGTGGTGTCTACAGCCTAGGGAATCGCCCCTTGTTGGCGTCCATGGCCATCAGGATGGTTCCGGAGGGGGCGATCAACCCCTCGACCTCTCGGCCAAGCCGAAAAACTCTCAGGACAACAATATAGCGATGtcgaaacaacaaaaaatacctCTAAGGATGGCAGGGGGCATTGATCCCAAAAGCATCTTCACCTCGTCGTACCGCGCGAAACCGCGAATGACCGGGCCAGTCGGTGTCGGCGGAGTGCCCGTGGTGGGTGCTGGTGGCAGTAGGAGGACCTACACCGAGGACGAACTCCAAGCTGCGTTGAGGGACATCCAGAGTGGCAAGCTCGGCACACGTCGAGCAGCTGTGATCTACGGAATACCAAGGAGCACCCTCCGGAACAAGGTGTACAAGCTCGCGATGGAGCGTGAACGGGACGCAACCCTGAATAGCACCCATTCACACCCCCTCGAGTCCGGCGCCCCAGTCTCCACCACCACCATGACCACCACAACaactacaacaacaacaacaacaacaacatcaacTACAACACCATCACCACCAAATACGACCCAAAATGCCTCCGCAACCACTCCGCCCCCGCAAGTGGATGAGTTTAACACTCGGCCACTTGACGTACGCGAGGTTGCGAGACTCGAGGCGGATGACAAGGAGCTTTCGGGTGCCGAGGAGGAAAAAGAAGTCGAGAAGGCTCTGCTCAGGCCTCTGTTATCCTTGGAGGATCTCGTGAGGTTTTCCGCGTTGGAAGGTAGTGGCAGCGATTCCCTCAGGACTCTGTTGCAACGAGGTCAAGAGACTGGTACCGAATGGCCGGGCTTTGAGCATGCCAATATCGGACCCTACATCCAAAAGATGCTCGCAGCTGCAGCACCCTTTAAGGGCTTAGAGACACCGGATTACAGAATACCGGAAGTGATGAGGCGATTGATGAGCGAGGATAAGAGGTTGAATAAGGACGTTAATGGGGATCATTCGCAGCACCAACATCACCACCAGCTTCATTCGCACCATCCGCATCATCACCAGTCGCCGCATCAGCAAGCTATCCAACAGGCTCAGCAACAACTGAACCAACAGTCGCAgtcccagcagcagcagcagcaacatcaaTCCCAGCAATCTGGACAACATCAGCATAGGGGACCGATGACGAATGACGACTTTAATCCCAGTATCGAGGAGGAAGCAAGCGACAGCGCCCAGGGCAGAGCGATACTCAAGATTCCGTCCTATAAGCCGGCAAGTAGTACGCCGAGTTCGAGCAAAAACAACGGGGAGCCAACTTCCGCGGCGTTTGCACAGAGTTTCGCGTCAGCGGCGACGGCGTCGAGCGCAGCCGGAAGTCCCGGGCTTCTGGAACGTGCGAGTCCCGCCTTTTCGGGTACGAGCAGTCCAACGAATTCACTCGTTGGCAAAGGTGTTGGTGTCAACTTTCGGGATGTTATTGCGAAAAGCATAAGCAACAAATTCCAGGAGGGTCAAGCTGGGCTTGGAGGTCAGGGCGTCGGTGGAGGTATTGTACCGAGTCCCACAGCTATGATGACTGAGAGTAATCCCTTCAAAAGGGGACGATACACGCCACCCCAGCCAACCCAGTCTCAGCAACAACCGAAGCCTCAGGGACAGGACAACAAACCGAAACCTGGCACCGGTGGCAAAGGCACCAGGCCCAAGAGAGGCAAGTACAGGAATTACGATAGAGACAGTCTCGTTGAGGCCGTCAGGGCTGTGCAACGAGGCGAAATGAGCGTACACAGAGCTGGTAGCTTTTACGGCGTGCCACATTCCACCCTCGAGTACAAGGTCAAGGAGAGACATCTCATGAGACCGAGAAAGAGGGACCAAAAGCAGCCCGACGACAAGTCGAAAGAGTCGGCAGCGACGGCAGGTGCGATGCGTTCGAGTCTTGCCGATAAGAAGCCACCGCTCAAGCCCCAGAAGCCGTACGCCTCAGCGCCGGGTGGTATGCCCGGTGGTCCGAACGGTATGAAGATGCCGCCATTCCTCGAGGGTATGACGCACCTTCCGTTTCCGCATCCCTTCAACTTCTGGGGACCCACGCCCTTTATGCCTTCGCCGTTTATCGCCGGTGCTCCAAATGTACCGACTATCTTACCCGAGCAGTATTTCGCGACGCAGAGGATGCGAGGACTGCAGGAGCAACAGAGAAGTGCGATCGTACAACAGGCGCAACGCGATCGTGACGGTATTGCGACCGAGCCAGGTACGTCGAATTCTCGGGGTTCGTCGATGGTTAAATCAACCCGAGAAATAGCCGAGAGTCTGTACGATGGTACGGGTGCGAACGGCAGTTTTCTCGACAATCTCATAAGATCGAGCCTCGAAACAGGGATACCGAGGGAGCAAAGGGCGATGGCCGAGGCGCGAACCAGTCAGCAACAGCACCAACAACAGCAAAGCTCCGCGTCGTCGCAACAACAACGCGAACGAGAGAGGGATCAACGCGAGAGAGAACATCTTCCCGAGGCGATGAGCAGCAAAGCACTCATCGACGAATTGTGTAGAAACTCGAGGAGAACGCCACTGCCTCGTATGACACACGACAGCAGCGAGGACGAAAGTTACAGGGGTACGTCAACCGTGAGGTCCTTACCGGAAAGACCCGAAAGGGTCCCTACCGTCGATCTCAGCCAATCTCCGACCGAAAGAATTAGGCCGGACGACCAGTGCAGCGATCGACTCACCTCGCCACCTACTCCCATGTCGATAACGAGGACCGGAAGCAGAGACGAGGATACCAGGGACTCGATGAGAATCGATCGTGGTAGCAGAGAACGCGAGATTCACAATGGCGGCCAGCAGGACAACCGGGAGCATAGAAAAACAATCAGCAgtctgcagcagcagcaacagcagcagcagctgaaTCACTACCCGGATATACACAACCTCTATGCCGTATCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGActcagcaacaacagcagcaacagcaacaaaagGAGTTTGCGGCCGTAAGCGGGCTTGTCGTCCAACTCCAGAGAGGCTACAACACCGGTTCGAGCAGAACGAACGCCGAGCAAACAACCCAAAACAACGCTCAGTCAAACGCCACCGGTACAATCACGAACGCCCCGCAGGAACAACGACAACCCGCTGTCCTCACCATGGAAGAATCCGTAGAGCAGTAG
- Protein Sequence
- MCLHTALEVSAFHCYNARHSLERVAEELMGRRRWKQYQDTLYSSTRSESATQPHHRLYPGPGLSNSCNLGGGSLGQVVAQRPPSGISAIGGPLAQGASTTTTTTTTTSTTSSTTTSSSSTTSSSSVGTATTTTTITGSSLDTSTRLNQLHQQNSAQLLVTNHRASHNSSNGGAGDLEDELQPRLRPEDIKLEIEESETALRSESLQQLHRQVLASSGPTQKTNNQTQRTRAIKEEGQEVEESENGPETGETGEAIEGEAQKRLKLAEESTLVGVTTPRNSVSPLRDNETRISAREQETGTNDLVDTIGTKEQQTEKRIEVPTPGLLRVKKEEELQEVPRSVSCGVDAVAIARLGNPVEVTNSGACKEPETVAESSLPYLVNRRVSPPIEDWKPLDKCYFCLDGKLPHDEQAPLSPQSESSSSSRSAESPMSVQVDPMAASVVAAALGTYPTLLPQWCLQPRESPLVGVHGHQDGSGGGDQPLDLSAKPKNSQDNNIAMSKQQKIPLRMAGGIDPKSIFTSSYRAKPRMTGPVGVGGVPVVGAGGSRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDATLNSTHSHPLESGAPVSTTTMTTTTTTTTTTTTTSTTTPSPPNTTQNASATTPPPQVDEFNTRPLDVREVARLEADDKELSGAEEEKEVEKALLRPLLSLEDLVRFSALEGSGSDSLRTLLQRGQETGTEWPGFEHANIGPYIQKMLAAAAPFKGLETPDYRIPEVMRRLMSEDKRLNKDVNGDHSQHQHHHQLHSHHPHHHQSPHQQAIQQAQQQLNQQSQSQQQQQQHQSQQSGQHQHRGPMTNDDFNPSIEEEASDSAQGRAILKIPSYKPASSTPSSSKNNGEPTSAAFAQSFASAATASSAAGSPGLLERASPAFSGTSSPTNSLVGKGVGVNFRDVIAKSISNKFQEGQAGLGGQGVGGGIVPSPTAMMTESNPFKRGRYTPPQPTQSQQQPKPQGQDNKPKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKSKESAATAGAMRSSLADKKPPLKPQKPYASAPGGMPGGPNGMKMPPFLEGMTHLPFPHPFNFWGPTPFMPSPFIAGAPNVPTILPEQYFATQRMRGLQEQQRSAIVQQAQRDRDGIATEPGTSNSRGSSMVKSTREIAESLYDGTGANGSFLDNLIRSSLETGIPREQRAMAEARTSQQQHQQQQSSASSQQQRERERDQREREHLPEAMSSKALIDELCRNSRRTPLPRMTHDSSEDESYRGTSTVRSLPERPERVPTVDLSQSPTERIRPDDQCSDRLTSPPTPMSITRTGSRDEDTRDSMRIDRGSREREIHNGGQQDNREHRKTISSLQQQQQQQQLNHYPDIHNLYAVSTDKKSACDSKLIVDHSSQKTQQQQQQQQQKEFAAVSGLVVQLQRGYNTGSSRTNAEQTTQNNAQSNATGTITNAPQEQRQPAVLTMEESVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00397979;
- 90% Identity
- iTF_00414215;
- 80% Identity
- -