Tlin002165.1
Basic Information
- Insect
- Tromatobia lineatoria
- Gene Symbol
- kn_1
- Assembly
- GCA_949699805.1
- Location
- OX453034.1:21253029-21270892[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-139 1.6e-135 453.5 8.7 173 564 24 411 14 422 0.85
Sequence Information
- Coding Sequence
- ATGGAAGACGACGAGGACGAAGATGACGACGATGCGGTTGCCGGAACGAAGGCTAAGGAGCAGAGGAGTAGAGGAAGCGACCAAGTGAGATGGAAACTattttttctcaaattcttcCTCAAGTGCAATCAAAACTGTTTGAAGAACGCTGGAAATCCGAGGGACATGAGACGATTTCAGGTCATCATATCGACGCAAGTCTGCGTGGAAGGACCTCACCTTGCAATATCAGACAATATGTTCGTCCACAACAACAGCAAACACGGCCGCAGAGCAAAAAGATTGGACCCGAGTGATCACGGAGAGTACAACAGTCTTTATCCAGCACTGCCCCTTCAAACACCCTGTATAAAAGCGATATCCCCGAGCGAGGGTTGGACGACCGGTGGATCGACGGTAATAATCATAGGCGAACACTTTTTCGATGGGCTTCAAGTGGTATTCGGAACGATGCTAGTGTGGAGTGAGTTAATAACGGATCACGCCATAAGGGTGCAAACACCACCGAGGCAGATACCTGGTGTAGTTGAAGTCACGTTGTCTTATAAAAGCAAACAATTCTGCAAGGGTTCCCCTGGACGATTTGTCTATGTCTCCCTGAACGAGCCAACGATCGACTACGGTTTCCAGAGGTTACAAAAGTTGGTACCTCGACGTCCGGCGGATCCGGAAAAGCTACCAAAAGAAATAATACTACAGAGAGCAGCGGATCTTGCGGAAATGTTGTACAGCATGCCTAGAAGAGATAACACAGCAATTACGGGTGCGCCGGGTAGTCCTGGCTCGGGTCATCCCCCGGCGCCCCCTACGTCGAGTTCGACGACAGCCTTCAACTCGTACACTGGTCAACTGGCGGTGACCGTGCAGGAAAACGGCAGCGCGGCCAAGTGGACCGACGACGGGAGCTCCGTGACAACGGGCGGTGGAGGAGGTGGTGGAGGAGGCGGAAGCGTCGGTGGTACGGGTAGTGTCGGTGGCAACAACGACGTCTACAGGCAAAGCAGTAGCGCCAGTCCACGAGGGGTTGTAAGCGGGGGTGGTTACTGCGGAAGTTCGGCAAGCACGCCGCACAGTCACAGCACCAGCGGAAGTTATTCCGTCGCGAATCCATATACCGGGAGCCCTACACTCTATACATCACCGCACGAACAATATGGCATTTTCTATACGTCCGGGGACGGGAGTGCGTTCGCCCCAGTAGTCCGACCACCGACCACCTCAGTCCCACCGCACTGGTCCACACAGCACCACCTCGCTACAGCTGCCCAGTAA
- Protein Sequence
- MEDDEDEDDDDAVAGTKAKEQRSRGSDQVRWKLFFLKFFLKCNQNCLKNAGNPRDMRRFQVIISTQVCVEGPHLAISDNMFVHNNSKHGRRAKRLDPSDHGEYNSLYPALPLQTPCIKAISPSEGWTTGGSTVIIIGEHFFDGLQVVFGTMLVWSELITDHAIRVQTPPRQIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLVPRRPADPEKLPKEIILQRAADLAEMLYSMPRRDNTAITGAPGSPGSGHPPAPPTSSSTTAFNSYTGQLAVTVQENGSAAKWTDDGSSVTTGGGGGGGGGGSVGGTGSVGGNNDVYRQSSSASPRGVVSGGGYCGSSASTPHSHSTSGSYSVANPYTGSPTLYTSPHEQYGIFYTSGDGSAFAPVVRPPTTSVPPHWSTQHHLATAAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01417498;
- 90% Identity
- iTF_00798364;
- 80% Identity
- iTF_00342932;