Tlin005458.1
Basic Information
- Insect
- Tromatobia lineatoria
- Gene Symbol
- ATFC
- Assembly
- GCA_949699805.1
- Location
- OX453036.1:11801899-11807873[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.3 7e+03 -2.1 0.0 39 58 117 136 113 140 0.64 2 3 9.9 1.3e+04 -2.9 0.3 5 13 277 285 272 287 0.45 3 3 2.8e-15 3.6e-12 46.9 8.2 2 63 295 356 294 358 0.95
Sequence Information
- Coding Sequence
- ATGTCATCCCGTTTGGATACGTGGGTTTGGAAGGCGGAGCCGGTATCCCCTAGTGGGGCATCGGCGGGGGAGGCGGAGGAAGATTTTCTATATACCGACGATAGCAAGTCACCATCATTATTGAACACCAGCACGAGCGAACCCGAATTATACGATGAGCACGCATCGCCAGCTCAAGTGGCGACGAAGCTTCTGCAGGAATTGGACGAATGGATAAAGGAAGAGCCGTTTTCAGATTGGTTGGAGGAAAAGATCGAGCTACCGATATTCGATGAACTACCGGCGCCAGAATGCGGCCAAAACAAGCCCATCATTTATCCCGGCCTCGGAAAACACCATTTGAACCAGGAAACCACCCAAACGTTGCTGCAAGAGTTCGAGAGCGTGTTGGGAGATGTGGAAGCGTGCCATCAAATTTATCCACCTATTAATTCGGCGTTAACACCACCACAATCACCGCCACCAAATAAATTCGGTGCTTCACTCGATACTCAATTGCTCGTGACGCTTCAGCCGGTAGCGCAGATCCCGCTTTATCCTTGTCACGAAACTGTGCAACAGAAAGTTTCTGACACTCAAAACAATTCTTCTTCCTATCTGGGTCAAATATCCGGCGGATGGAACGCGGAGAATGTGTCTCTGGTGCCGCTACCGGACGTAGCGAGCGAATTGGCAGAGGTTGACGAGTACGTTCGCTCCTGCGCAGAGGATATCGCACCCTCGAGCCCGTGCACTAGTTCCGGCGGCAGTTACTTATCCTCCGAAGATTCTTCGAACCCTGACGATCCTGATTGGAGCAGCGAAGTCGGCGAATCGTTATTAAAACAGCGCACTTCTCGGCTTACGAAAAATCGTCACAAGCCATACTCACGACCAACGGTTGAGGACAAAAAAGTGCGAAAGAAGGAGCAAAACAAAAATGCCGCGACTCGTTATAGGCAGAAGAAAAAACAGGAGATCAAGGAGATTCTCGGCGAGGAACAGGAACTCGCTGATTACAATGACAAACTTCAGGACCAAGTTAAAGAGCTAAATCGCGAAATTGGCTACTTGAAGGGACTGATGCGCGACTTGTTCAAAGCCAAGGGTCTCATCAAATAA
- Protein Sequence
- MSSRLDTWVWKAEPVSPSGASAGEAEEDFLYTDDSKSPSLLNTSTSEPELYDEHASPAQVATKLLQELDEWIKEEPFSDWLEEKIELPIFDELPAPECGQNKPIIYPGLGKHHLNQETTQTLLQEFESVLGDVEACHQIYPPINSALTPPQSPPPNKFGASLDTQLLVTLQPVAQIPLYPCHETVQQKVSDTQNNSSSYLGQISGGWNAENVSLVPLPDVASELAEVDEYVRSCAEDIAPSSPCTSSGGSYLSSEDSSNPDDPDWSSEVGESLLKQRTSRLTKNRHKPYSRPTVEDKKVRKKEQNKNAATRYRQKKKQEIKEILGEEQELADYNDKLQDQVKELNREIGYLKGLMRDLFKAKGLIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00342893; iTF_00652431; iTF_00414049; iTF_01207096;
- 90% Identity
- iTF_00652431;
- 80% Identity
- -