Tlin008647.1
Basic Information
- Insect
- Tromatobia lineatoria
- Gene Symbol
- Xbp1
- Assembly
- GCA_949699805.1
- Location
- OX453038.1:723659-726584[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.7e-15 3.6e-12 46.9 12.3 2 61 88 147 88 151 0.95 2 3 4.5e-05 0.06 14.2 1.3 28 61 128 161 127 165 0.91 3 3 3.7 4.8e+03 -1.6 0.2 35 48 216 229 213 232 0.72
Sequence Information
- Coding Sequence
- ATGAGTGCTTTGAAGAGCGTCATTATAACATTGCCTAAGAGCCTAACGAAGGCTCCAGGCTGCGTTAACTCCGGCGAACTCAGAACTAGCAACACTAACGTAAACTTCACAACGTCCATTCTCTCCGCGAGAAGTAACAATAAAATGGAGCGGAAACCAACGATGAAGGATATCGAGGACACGATAACCAGAGATGCCGAAATCACAAAACCCGACATGTGGCTCAGAGGAAAGAAACGAAGATTGGATCACTTGACCTGGGaagaaaaattacaaagaaAaAAATTGAAGAACCGAGTCGCAGCACAAACTTCTCGGGATAGGAAAAAGGCAAAATTGGACGAACTGGAGGACACAGTGAAGGCATTGAGAGATAGCAACGATTTGCTGAGTCAAGAGTGCGCGATGCTGAGATCAGAGAATGAGAGTTTGGTAACAGAATCAAAGAGACTGAGGAGAGAACGAGACGAGGCGAAAGCGACAACGATTGCGAGGACGGACGAGCGTTTCTGCTCGGGGTGGGGCAGCTCAGCCGGCACCGTCCCCGACATCCCTCAGCCCAAACGCCTCGATAATCCTCAAGATCATGACGCTCTACCTCCTCTCGAGGAACTCTTCGGCGAACTCCAAGGCGACGACTACATCGAACGACTCGAGGAACTCGCCGAGAGCCTTCTGCGAGAAGTTACCGCAGAAGTGGAAGCAAGTTCTTGTAAACCAAATGACCAGATCTCGGTCAAGCAAGATACCATTGAAGAATCTAACGATACAGAAGGAATGGTGGGGCAGACATCAGAAAATGTGGAAGCCGGTGCAGCCGTTGAAAGTGTGAATTTCCAGCGAAATTTCGTGGTCGCTTCGCCAGCGAGGACGACGACGAATTTGCCGATTAATTGCACGAGAACAAAGACTGTCGCGAACGTTTTAAGCGGCGCTCCACGAAATAACGGGCAGATCGTCGCCGAGGGTGTTGAAAGTTCAAAACTTTCTTTGAAACGCGAGGTCCAAGTCAAGGAAGAACCGACGACCGATATGGATACAGTTTATGGGACTTACGACGAGGCCACTAATTGCATTACGATTATTTATCCAGGCGAGGATGACGACGTTAGGATACAGGAATGCGTTCAGGAAATTAGTAGCAGCAATACGACCACCAGTGAAAATTCCACCTTCGACGAGTCGCCCACCTACAAACAGGCGCAATTCCTCGCTTCTAAAAATTCTATACACAGCAATTATCTCTTATCTCCCGCTTACACATTTACGGACTCAATATCGTCACCCTCGAGCATACATTCGGAAGATTCGGACGCAGGAATGGCAAACGCTTACAAATTGGATTCGAATCTTTCGGACTGTGGTTACGAGTCTCACGATTCGCCAATTCAAACACACGCCAATGAGAAAAGCTCAACAGTGAGAAATGGAAACGTAAACGCCATAAACGGCGCTGCTCTTACCGATCTTTGGCACGAAAGTTTCTCCGAATTGTTTCCAAGCCTTGCGTGA
- Protein Sequence
- MSALKSVIITLPKSLTKAPGCVNSGELRTSNTNVNFTTSILSARSNNKMERKPTMKDIEDTITRDAEITKPDMWLRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEDTVKALRDSNDLLSQECAMLRSENESLVTESKRLRRERDEAKATTIARTDERFCSGWGSSAGTVPDIPQPKRLDNPQDHDALPPLEELFGELQGDDYIERLEELAESLLREVTAEVEASSCKPNDQISVKQDTIEESNDTEGMVGQTSENVEAGAAVESVNFQRNFVVASPARTTTNLPINCTRTKTVANVLSGAPRNNGQIVAEGVESSKLSLKREVQVKEEPTTDMDTVYGTYDEATNCITIIYPGEDDDVRIQECVQEISSSNTTTSENSTFDESPTYKQAQFLASKNSIHSNYLLSPAYTFTDSISSPSSIHSEDSDAGMANAYKLDSNLSDCGYESHDSPIQTHANEKSSTVRNGNVNAINGAALTDLWHESFSELFPSLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00342900;
- 90% Identity
- -
- 80% Identity
- -