Trha006514.1
Basic Information
- Insect
- Troides rhadamantus
- Gene Symbol
- Zmiz1
- Assembly
- GCA_018246435.1
- Location
- DWLU01000871.1:5320-14817[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.31 3.2e+03 0.1 0.9 4 24 459 479 456 484 0.88 2 2 2.9e-25 3e-21 77.1 4.6 1 50 542 591 542 591 0.98
Sequence Information
- Coding Sequence
- ATGTCAGTGACGTCGGTGTCGGCGCTCGCGCTACACGTCTATGATGTTTCGGTAAATACAAATTCGTACTCGACGGCGAACTCTGCTAATACGGCTGGGTACGCGGGGAACAATATAACATACGCGGGAGCACAGGCTCCCGATACTGGCAAACACAACCCTCTACAAGGGACCATAGGATACAGAGTAAACGCGCATAGTGGCTATGGGTGCGCGGGCGGTTCGGGCGCGATGAGCGGCGGGGGCGAGAACGCGCAGTTCGGCGCCACCGCCGCGATGGTTGCCGCGGCCACCACGGCCGCGATGCAGGACTCGCAGCCCTTCTCACAGATGCAAAACATGACGATGGGTAATCCCCAATATGGTGCAATGAACGGCTACGGTCAACAACGCAGCCACAACCCTGCTCTGACAGGCATGGGCATGGGGGGAAACGGAGGCATGAATGGTATGACTGGCATCGGCCAAATGGGCAACGCCGCTATGAACGGCATGAATCCGATGGCACAAATGGCAAACATGGGAATGCACGCAAACATGATGTCCTCACAAATGGGACCTGGTCAAATGGCCTCGACAGGAAAAATGACACAGGGATATCAGAGACGCCATGCGCCTTATCCGTCAGGAACAATGCTTATGGGCCAACGAAAACCTCAATACATGGGTGGACAGGCCGGATTTGGGCCGCAATATCCTACTGGATATGGCGGACGGCCAGGTTTTCAAACTCAATACCCACCTCAACAGGCCCTAGGTCCGACTGGTAATTTTGGCGCTGCTATGAGAGGAAATATGAGGCAATCCACGCCGCCATACTCGAACCAAGGGCAGTATTTCAATGGTGGCGTACCTAACCAATTTCCTCAACACCAAACTGCAAATGCACAATACGCTGGGCAATATAGCGGGCAATTCGCGCAAGAAGTCGCGATGCGGACAAGCATGTCTTACCAGCACAGTCCTGTACCTGGGAACCCGACACCTCCGCTTACACCAGCCAGCAGTATGCCACCGTATATCAGTCCAAATGCTGATGTAAAACCACACTTTAACGAGCTCAAACCTACGATGAGCATGCAAAacgACGAGCTTCGGCTAACATTCCCTGTAAGAGATGGTATTATTTTACCACCTTTTAGATTAGAACATAATTTAGCAGTTAGCAACCATGTATTCCAATTAAAACCTACTGTTCATTCAACTTTAATTTGgagATCGGACCTTGAATTACAACTTAAATGCTTTCATCACGAAGATCGCCAAATGAACACTAACTGGCCAGCAAGTGTTCAAGTGTCAGTTAACGCAACGCCATTAGTCATAGATAGAGGCGAGAACAAAACATCACACAAACCATTGTACCTGAAGGAAGTGTGCCAGCCCGGGAGAAATACGATACAGATCACAGTGTCCGCGTGTTGTTGTTCGCATCTGTTCGTACTTCAATTAGTCCACCGACCGAGTGTACGCAGTGTTTTGCAAGGGCTACTGCGGAAGCGGCTGCTCACAGCGGATCACTGTATTGCTAAGATCAAAATGAATTTCAATCAATCACCTGTTAACAACAACGGATCCAACACCGGCAACGATAGGGACAGCGTGGAGCAGACTGCTCTGAAAGTGTCTTTAAAATGTCCAATCACCTTCAAAAAGATTACATTACCGGCGCGTGGGCACGAATGCAAACATATACAGTGCTTTGACTTGGAATCTTATTTACAACTCAATTGTGAACGAGGGTCATGGAGGTGTCCGGTGTGCAACAAACCGGCGCAATTGGAAGGCCTCGAAGTTGATCAGTACATGTGGGGTATTCTCAACACACTTAATGGATCAGATGTTGATGAAGTAACGATCGATAGCGGAGCAAATTGGAAGGCAGCTAAAAGTCCGACCAACCCGggaattaaaCAAGAAGACGACAGTAATGACAATAGTGTAGGAAAACGAGGCAAAGCAGTTTCTCCCGGGTCTATGAACATGCCTACTATGAACAATTGGGATATGAATCAAGCTCTTTCCCCATACCTGCCGCCAGATATGAACACAATTGCTAGTGGTTCTATGATCTCATCTTACAATCAAAGCGCGCAGAATAGAAACCCTAACGCAAATAGCCAGAACTATGACTTTGGCATGAATAACGGCCCCGGCAGCAATGAATTTGCTGGCAATGGGCCTCTTTCACATTTAAATGACAGTGTCAACTCCTTGGACCCACTCAATGCTATGGAGAAGAGTCTAAATGAAcagATGCCGCACACGCCTCACACACCGCACACACCGGGCTCGGCGCACACGCCAGGCGGTGGCGGAGCGCACACTCCGGGCTCCAGCCACACGCCAGGCCCGCCGTCCGTCGGGCACCCGCTCAGTGAAGTCGACATACCAGCGGACCTTAACTTCGACCCCGCTGCAGTCATTGACGGCGAAGGCACTGATAACCTAAATTTGCTTCCTGAAACTAACGTGGACCCAATGGAACTTTTATCTTATTTGGATGCACCGGCGCTTGGTGAACTTCTAGCGACTCCGccatcttcgtcatcatcagcaggtTCACACCCTCCACGAGCACCTTCTTCGGACGATCTGTTAGCATTGTTTGAATGA
- Protein Sequence
- MSVTSVSALALHVYDVSVNTNSYSTANSANTAGYAGNNITYAGAQAPDTGKHNPLQGTIGYRVNAHSGYGCAGGSGAMSGGGENAQFGATAAMVAAATTAAMQDSQPFSQMQNMTMGNPQYGAMNGYGQQRSHNPALTGMGMGGNGGMNGMTGIGQMGNAAMNGMNPMAQMANMGMHANMMSSQMGPGQMASTGKMTQGYQRRHAPYPSGTMLMGQRKPQYMGGQAGFGPQYPTGYGGRPGFQTQYPPQQALGPTGNFGAAMRGNMRQSTPPYSNQGQYFNGGVPNQFPQHQTANAQYAGQYSGQFAQEVAMRTSMSYQHSPVPGNPTPPLTPASSMPPYISPNADVKPHFNELKPTMSMQNDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVHSTLIWRSDLELQLKCFHHEDRQMNTNWPASVQVSVNATPLVIDRGENKTSHKPLYLKEVCQPGRNTIQITVSACCCSHLFVLQLVHRPSVRSVLQGLLRKRLLTADHCIAKIKMNFNQSPVNNNGSNTGNDRDSVEQTALKVSLKCPITFKKITLPARGHECKHIQCFDLESYLQLNCERGSWRCPVCNKPAQLEGLEVDQYMWGILNTLNGSDVDEVTIDSGANWKAAKSPTNPGIKQEDDSNDNSVGKRGKAVSPGSMNMPTMNNWDMNQALSPYLPPDMNTIASGSMISSYNQSAQNRNPNANSQNYDFGMNNGPGSNEFAGNGPLSHLNDSVNSLDPLNAMEKSLNEQMPHTPHTPHTPGSAHTPGGGGAHTPGSSHTPGPPSVGHPLSEVDIPADLNFDPAAVIDGEGTDNLNLLPETNVDPMELLSYLDAPALGELLATPPSSSSSAGSHPPRAPSSDDLLALFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00112199;
- 90% Identity
- iTF_01142097;
- 80% Identity
- -