Trha018085.1
Basic Information
- Insect
- Troides rhadamantus
- Gene Symbol
- pnr
- Assembly
- GCA_018246435.1
- Location
- DWLU01008946.1:4278-6789[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.8e-18 1.9e-14 55.1 6.0 1 34 14 46 14 48 0.98
Sequence Information
- Coding Sequence
- ATGTCCAGTTTAtcggcggcgcggcggcacgGGCAGTGCTGCACCAACTGCGGCTCGCGCAACACCACGCTGTGGCGGCGCAACAACGACGGCGAGCCGGTGTGCAACGCGTGCGGCCTCTACTACAAGCTGCACGGGATCAACAGACCGTTAGCTATGAGGAAGGACGGCATTCAGACCAGGAAGAGGAAGCCGAAGAAGTCAGGCAATGGCGCGAAGCCCGCTCAAGAGACTGCCAAGAAGGATGATCATAGTTCACCAGGAGTAGACGAGAGCAAGCCGAGCGTACCGGAAGCCCTGCCGCTGACCGCCGGCGGGGCGGGCGGCGCCTCAGGCGGCGCGATGCGGTCGCGCGCAGAGACTAGCGCGACGCCCGGCCCGCATgtgcacgcgcacacgcacgcgcacgctcatgcgcacgcgcacgggcACGGGCAGCCGCAGCAGTACGGACTCGGCGTGCCTGCGCCCGCTTTCCTCTCCAACCCGTCGCTGTTCAACATCAAGAGTGAGCCCAACGCGGCGTCGCCCTACGACGGGTACGCGCACGCCGCAGCGCCCTACCACACACAGCAGCACTACCTGCACGCCCTACAGTACGGTCTCGGGAATAGCGAAGAGGAGGAAGGCAGCGGGTTTCTCCACCAGCGCAACGTGACCGCGCACGCCAAGCTCATGGCGTCCACGTAG
- Protein Sequence
- MSSLSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSGNGAKPAQETAKKDDHSSPGVDESKPSVPEALPLTAGGAGGASGGAMRSRAETSATPGPHVHAHTHAHAHAHAHGHGQPQQYGLGVPAPAFLSNPSLFNIKSEPNAASPYDGYAHAAAPYHTQQHYLHALQYGLGNSEEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01143530; iTF_01147103;
- 90% Identity
- -
- 80% Identity
- -