Trha009915.1
Basic Information
- Insect
- Troides rhadamantus
- Gene Symbol
- -
- Assembly
- GCA_018246435.1
- Location
- DWLU01002048.1:137-2268[-]
Transcription Factor Domain
- TF Family
- NDT80_PhoG
- Domain
- NDT80_PhoG domain
- PFAM
- PF05224
- TF Group
- Unclassified Structure
- Description
- This family includes the DNA-binding region of NDT80 [2] as well as PhoG and its homologues. The family contains Swiss:Q05534 or VIB-1. VIB-1 is thought to be a regulator of conidiation in Neurospora crassa and shares a region of similarity to PHOG, a possible phosphate nonrepressible acid phosphatase in Aspergillus nidulans. It has been found that vib-1 is not the structural gene for nonrepressible acid phosphatase, but rather may regulate nonrepressible acid phosphatase activity [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-41 1.9e-37 131.4 0.0 1 179 122 320 122 321 0.91 2 2 3.7 4.3e+04 -3.4 0.1 78 108 473 503 464 511 0.73
Sequence Information
- Coding Sequence
- ATGGACGACGAACAGCATACTCGCAGGGTTAACACCCTCGGCCATCCCCTGGCCCAGCCAGTCTCCATCCCAGCCTCCAACGGTATGCGATACAACACGTTGCCGCCTGCAATCCACGATATACCTACGCCCCGAGTCCTCGACAATACGATTGACCGTCCCTCGGGCTTAATGCTTGGACAGAACGGAAACATGTACATGGATCCACTGGCACGCATCCCCCATCAAGTAGGAGAAATACCTGATTCACCTCCCTTCGACGAGACCAATATCCTGGAACCGGTGATGACGAACGGTCAGACGGTGAGACTGGAGATTCAAGCAAAGATCACAAACAACAAGAAATTCCTCCATGTGGACGACAAATGGACATGCTATCGACGCAACTACCTTTCCGTCACATGCTCCTTTACCCTGCATCCATGGGTTTCAGGTCCCTTTTATATCAAAACTCGAGACCAAGGCACCCAGCAGATTCGACAGTTCGCCGTGTCAATTTCGGCCATCGTGAATGCGCAAGCCCACGAGAGCCGCGAGTTGGTTCAGCACACTCCCAAACGTGACAAGGAGTCCGAGCGGCCGCCCGGGAGAATCGTCATCCAGCCTCAGCATCCTTCGTCATTGAGTCTTGGACATGGTTCTGCCGCATCGGGCGGTGGTCATCATGGATTCGGGCTTTCGTCCCAGTCGGCAGGGCTACTGGAATACGGTACATCGTACACCAATACCTCGCACTCACCACAACCCCCAACATCGCACTCTTTCGAAAGGATCCAATTCCAGAAAGCCACGGCAAATAATGGCAAGCGGCGGGCCGCCCAACAATATTACAATCTCGTCGTCGACCTCTACGCCGAGGTCGCCGGCCCTAGCCCCGGCGGAACTGAGTGGATCAAAATCGCCCAACGATATTCGCACCCAATGGTGGTCCGTGGCCGGTCCCCCGGCCATTATAAAGATGGGAAGGAAAGCCCGTCGAGTACAGGTCATGATGGGAGGAGCACGGGGGGTTCAGGCGATGGTTGTGGTACTATGATGCCGCGGTCAAATATGCCACTGATGCCGTCCAGCACTTCGTCATGCCATAGCGGAGGGCCATATGGTCGATccgattatcatcatcaggtgaaaaccGAGCAGTCTCCGTTGAGCGATAGTCCGCACAtctcgtcatcatcgtcgtcgacCGCGCTTGATATCGGAATGCTGAGTGACTCGATGGACCCGTTGGACTCGATGAAGGCCACCTCGAGTATGGGTTCATACGATGGAGGATTTAGCATGGCCTCTCCGCTGGATCGGAAAGGAGGAGTGGGTGTagaagcagcagcaggaggaggaggaggagcatTCCGCCATCCGTTGTCATCATTCGAGTACGATACATTCTCCAAAGACAGTGAAGTCTCAGGGAGCAGCTTTCCGGACACGGTTACGTCGATGGTATCGATGATTCCAAACGAGCAGAACGATACATCATCGTCTTATTTGAGGAATCCTCCTCGACTTCCGTCACAACCATCGAGTGCTGGGGGGTATGATCCTATATACTCTGATGGATCGTATGGACGATACGATGCTGTGCAGAATTCACAAGGTCTATGCACTTGA
- Protein Sequence
- MDDEQHTRRVNTLGHPLAQPVSIPASNGMRYNTLPPAIHDIPTPRVLDNTIDRPSGLMLGQNGNMYMDPLARIPHQVGEIPDSPPFDETNILEPVMTNGQTVRLEIQAKITNNKKFLHVDDKWTCYRRNYLSVTCSFTLHPWVSGPFYIKTRDQGTQQIRQFAVSISAIVNAQAHESRELVQHTPKRDKESERPPGRIVIQPQHPSSLSLGHGSAASGGGHHGFGLSSQSAGLLEYGTSYTNTSHSPQPPTSHSFERIQFQKATANNGKRRAAQQYYNLVVDLYAEVAGPSPGGTEWIKIAQRYSHPMVVRGRSPGHYKDGKESPSSTGHDGRSTGGSGDGCGTMMPRSNMPLMPSSTSSCHSGGPYGRSDYHHQVKTEQSPLSDSPHISSSSSSTALDIGMLSDSMDPLDSMKATSSMGSYDGGFSMASPLDRKGGVGVEAAAGGGGGAFRHPLSSFEYDTFSKDSEVSGSSFPDTVTSMVSMIPNEQNDTSSSYLRNPPRLPSQPSSAGGYDPIYSDGSYGRYDAVQNSQGLCT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00180521;
- 90% Identity
- iTF_00180521;
- 80% Identity
- -