Trha015569.1
Basic Information
- Insect
- Troides rhadamantus
- Gene Symbol
- ssr2
- Assembly
- GCA_018246435.1
- Location
- DWLU01006085.1:1-1729[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-10 5.2e-07 31.8 0.0 3 44 402 443 400 445 0.94 2 2 9.3 1.3e+04 -1.5 0.0 26 40 488 502 487 508 0.78
Sequence Information
- Coding Sequence
- ATGGAGGATAACCCGAATGCTTCGAGCGGCGCTGCCGGTGATGCTCAGGCTATCGCTGCCGGTCAGGATGCCCCGGGTGATGTTGTTGGTGTTCCGAGTCACGCTTCTGAATCGCAATCGCGTCAGGGATCGCCGGTGAAGAAGACGGAGAGTGCTTCGGGTACCGATAACCCGCTCGACGCGCCTGCGTCTCCCAAGCCGCAGAATGGCGATGCCGATCCTGAGGACGAGGAGATGGGCGGCATGGAAGATGCAAAGAAAGAACCAGAGGGTGATGAGGCTGGGGAGGGTATACTGGGTGCGGATGGTACCGTCGAGGAGCAGCCTGCGCAGGCCAAAGCATCACTTGAGGCCTCTGCTCGTTCACATCTGGTCTCCCAGACACATGCCATTATTCTCCCCAGCTATTCCACCTGGTTTGATATGCACGTCATCCACCCTATAGAGAAGAAGGCTTTGGCCGAATTCTTCAATGGTCGCAACCGCAGCAAGACCCCCGCCGTCTACAAGGACTACCGAGATTTCATGATCAACACCTATCGACTCAACCCCATCGAGTACCTTACGGTTACCGCCTGCCGTCGCAACCTTGCCGGAGATGTCTGCGCCATCATGCGCGTTCACTCTTTCCTCGAGCAGTGGGGGTTGATTAACTACCAGGTTGACCCTCAAACACGTCCTTCTAACATCGGTCCTCCGTTCACGGGTCATTTCCGGGTAATTGCCGACACCCCGCGTGGTCTCCAGCCTTTCCAACCCGGTCCCAGCCATACGGTTACACCAGGAAAGCCTCACCCGGCCACTGACCGTGCCGCTTCAGCTACTCCTGCCTCCAAGGCGGATCTCAACCTCGAACTTCGCCGTAATATTTACGACGACAAAGGCAAGGAAATCACGCCCGCCACAGAGGACAAAGAAAAGCAGACCAACGGCGAAGGTTCCGCCGATGATTCGACCAAGGTGCTCGAGAACGCCGCTCGGGAACCCAGAAAGAAGGCCCATTGCTTCTCTTGTGGCATTGACTGCACTCGTCTCAGATTCCACTACGCGAAGTCAACCCCAGCATCAGGTAATGCCTCGAATTCGAAGTACGATCTGTGCCCCAACTGCTTTTTGCAAGGGCGAATGCCTTCGAGCCACAGCGCATCGGACTTTGTTAAACTTGAAGACAACGAATACACAATTGCCGCTGATAAAGATACGCCTTGGGGTGACTCGGAACTCGTCCTGCTCCTTGAAGGGTTGGAGAACTTTGATGACAACTGGGAACAAATTGCCAACCACGTGGGTACGAGGACAAAGGAAGAATGTGTGATGAAGTTCCTGCAGCTTGAGATCGAAGACAAATATGTCGACGATGTGCCAAACCTGCAGGGATCGAGCGGAAGAGATCCCGTTAGCCATGTCGAAAACCCGGTTCTGTCCGTGGTTGCATTCCTCGCCCAAATGGCAGAGCCTGCTGTTGCTGCGGCTGCGGCCGGACGCTCTGTGGAAGAGATCCGCAAGGAACTCAAGAAGCAGCTCGGGAAAGGCTCGAGTGAGGACAAGGGCAAGGAGAAAGAAGGCGAGCCCACGAAGGCAGAGAATTCCATGGAACTGGAC
- Protein Sequence
- MEDNPNASSGAAGDAQAIAAGQDAPGDVVGVPSHASESQSRQGSPVKKTESASGTDNPLDAPASPKPQNGDADPEDEEMGGMEDAKKEPEGDEAGEGILGADGTVEEQPAQAKASLEASARSHLVSQTHAIILPSYSTWFDMHVIHPIEKKALAEFFNGRNRSKTPAVYKDYRDFMINTYRLNPIEYLTVTACRRNLAGDVCAIMRVHSFLEQWGLINYQVDPQTRPSNIGPPFTGHFRVIADTPRGLQPFQPGPSHTVTPGKPHPATDRAASATPASKADLNLELRRNIYDDKGKEITPATEDKEKQTNGEGSADDSTKVLENAAREPRKKAHCFSCGIDCTRLRFHYAKSTPASGNASNSKYDLCPNCFLQGRMPSSHSASDFVKLEDNEYTIAADKDTPWGDSELVLLLEGLENFDDNWEQIANHVGTRTKEECVMKFLQLEIEDKYVDDVPNLQGSSGRDPVSHVENPVLSVVAFLAQMAEPAVAAAAAGRSVEEIRKELKKQLGKGSSEDKGKEKEGEPTKAENSMELD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -