Trha015063.1
Basic Information
- Insect
- Troides rhadamantus
- Gene Symbol
- basR
- Assembly
- GCA_018246435.1
- Location
- DWLU01005564.1:3848-5002[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-13 1.6e-10 43.0 1.6 4 43 11 53 10 54 0.96 2 3 0.00025 0.36 13.1 0.0 1 20 62 81 62 84 0.92 3 3 1.1e-09 1.5e-06 30.3 0.1 1 44 119 163 119 165 0.90
Sequence Information
- Coding Sequence
- ATGCCACGCACCAAGAATCATGTTCGATGGTGGACTAAGGAAGAAGACCAATTGCTCGAACATTTTGTGTCGCAGCAAGAGGGGGGTAACGTTGACTGGCGTCAGATAGCCAGCAGGATCCCCGGCCGCAGTAATAAGGATTGCAGGAAACGGTGGGTCTACGGTATCAATCCGTTACTGAACAAAGGCCCTTGGGATGAGAACGAGGACATGAGATTACGGGAAGCTGTCGAGCTGTGTGGATGCCACCAGATCGTAAGGAAAACTACCTACCTGCCTGTTGTTTGCGCCAATTCTGATGGCTCACCAGAATGCTCTCGCCGGTGGCGTGAATCCATTAATCCCAGTATCAACCGGAACCGATGGTCCCTTCGCGAAGATGCGATCCTGAATGAGGCCGTGCAGACGTACGGGAAACGATGGACAGAGATCGTGGAGCGCTATTTCCCGAATCGATCTCCCATTGCTGCAAGACAGAGATACGTTCAACGCTTTGGGAAGGGCATCGACGACGCAGATGAATGTGAAGACGACTCTGGGCGGACTCGCAGAAGTGCCAATCCGCAGCTTCTCTGGCAGGTCCGAGACCACACGCAACATGAGTGCATACAGCCATCGCTGGATAATGAGCTCGCTGCTGCTGGAGATGATAGCACCACCGGTCTATGGACAGACTACCCCACCCAGCCATCGTCTCTGCCGCAGTACAGCTGGGGTCCTCCGTCTTCCAGCCTTTTGGATATTCATGGGCATGACATGGGTGTAGCGGACTTGCCAGGGGCATCCTCGTACCTGTCGGCCTTGAATGTGTCTTCTCCACCGAGTCTGCCGGAGCTACCTGATCGGCGACTGTTGAAAATGGACGCCACGTTTACCGGGGAGTGA
- Protein Sequence
- MPRTKNHVRWWTKEEDQLLEHFVSQQEGGNVDWRQIASRIPGRSNKDCRKRWVYGINPLLNKGPWDENEDMRLREAVELCGCHQIVRKTTYLPVVCANSDGSPECSRRWRESINPSINRNRWSLREDAILNEAVQTYGKRWTEIVERYFPNRSPIAARQRYVQRFGKGIDDADECEDDSGRTRRSANPQLLWQVRDHTQHECIQPSLDNELAAAGDDSTTGLWTDYPTQPSSLPQYSWGPPSSSLLDIHGHDMGVADLPGASSYLSALNVSSPPSLPELPDRRLLKMDATFTGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00180408;
- 90% Identity
- iTF_00180408;
- 80% Identity
- iTF_00180408;